ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl22d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane... 178 3e-42
2gb|AY296911.1| Triticum aestivum vacuolar proton-inorganic pyrop... 127 1e-26
3gb|AY860110.1| Micromonospora rosaria strain SCC2095 plasmid pMR... 44 0.13
4emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on ch... 44 0.13
5gb|AC006450.13|AC006450 Homo sapiens chromosome 9, clone RP11-85... 44 0.13
6gb|AY106681.1| Zea mays PCO136360 mRNA sequence 44 0.13
7gb|AC163391.4| Mus musculus chromosome 3, clone RP23-173N16, com... 42 0.52
8gb|AC102465.11| Mus musculus chromosome 3, clone RP24-333O23, co... 42 0.52
9gb|AY103622.1| Zea mays PCO084888 mRNA sequence 42 0.52
10gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, co... 42 0.52
11gb|AY022083.1| Oryza sativa microsatellite MRG4408 containing (T... 40 2.1
12gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 40 2.1
13emb|Z98981.3|SPAC6F6 S.pombe chromosome I cosmid c6F6 40 2.1
14gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare str... 40 2.1
15gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Canc... 40 2.1
16ref|NM_001019330.1| Schizosaccharomyces pombe 972h- hypothetical... 40 2.1
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
19gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 2.1
20gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome... 40 2.1
21dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
22dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.1
23emb|X67030.1|SPRPS13G S.pombe rps13 gene for ribosomal protein S13 40 2.1
24emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chr... 40 2.1
25dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds 40 2.1
26gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.1
27dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase,... 40 2.1
28gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 38 8.2
29gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome... 38 8.2
30gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 38 8.2
31gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 38 8.2
32gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 38 8.2
33ref|XM_387224.1| Gibberella zeae PH-1 chromosome 4 RS13_XENLA 40... 38 8.2
34ref|XM_798851.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 8.2
35gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome... 38 8.2
36ref|XM_803328.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 8.2
37gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 38 8.2
38gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, com... 38 8.2
39gb|AC015933.9| Homo sapiens chromosome 18, clone CTD-2023G8, com... 38 8.2
40emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 38 8.2
41emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 38 8.2
42emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 38 8.2
43emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 38 8.2
44emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; s... 38 8.2
45emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 38 8.2
46dbj|AB226110.1| Aspergillus oryzae cDNA, contig sequence: AoEST2967 38 8.2
47gb|CP000133.1| Rhizobium etli CFN 42, complete genome 38 8.2
48dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 38 8.2
49gb|AC098865.2| Homo sapiens BAC clone RP11-374O3 from 4, complet... 38 8.2
50gb|AC092629.2| Homo sapiens BAC clone RP11-280J8 from 4, complet... 38 8.2
51gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence 38 8.2
52gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 8.2
53dbj|AK075611.1| Mus musculus adult male brain cDNA, RIKEN full-l... 38 8.2
54dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.2
55gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosom... 38 8.2
56dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 8.2
57gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 38 8.2
58gb|AC009298.3| Homo sapiens BAC clone RP11-17I6 from 2, complete... 38 8.2
59dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 8.2
60emb|AJ340490.1|HSA340490 Homo sapiens genomic sequence surroundi... 38 8.2
61gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 8.2
62gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromo... 38 8.2
63gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 38 8.2
64dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 8.2 
>dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane proton-translocating
           inorganic pyrophosphatase, complete cds
          Length = 2649

 Score =  178 bits (90), Expect = 3e-42
 Identities = 93/94 (98%)
 Strand = Plus / Plus

                                                                       
Query: 75  cgtcggcctgccagcctgacagccatggcgatcctcggggagctcgggacggagatcctc 134
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgtcggcctgccagccagacagccatggcgatcctcggggagctcgggacggagatcctc 60

                                             
Query: 135 atccccgtctgcggggtcatcggcatcgtcttcg 168
           ||||||||||||||||||||||||||||||||||
Sbjct: 61  atccccgtctgcggggtcatcggcatcgtcttcg 94
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>gb|AY296911.1| Triticum aestivum vacuolar proton-inorganic pyrophosphatase mRNA,
           complete cds
          Length = 2671

 Score =  127 bits (64), Expect = 1e-26
 Identities = 70/72 (97%)
 Strand = Plus / Plus

                                                                       
Query: 97  ccatggcgatcctcggggagctcgggacggagatcctcatccccgtctgcggggtcatcg 156
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 29  ccatggcgatcctcggggagctcgggaccgagatcctcatccccgtctgcggggtcgtcg 88

                       
Query: 157 gcatcgtcttcg 168
           ||||||||||||
Sbjct: 89  gcatcgtcttcg 100
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>gb|AY860110.1| Micromonospora rosaria strain SCC2095 plasmid pMR2, complete sequence
          Length = 11188

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 35   cccaccccgcccgccgccgtccggtc 60
            ||||||||| ||||||||||||||||
Sbjct: 2374 cccaccccggccgccgccgtccggtc 2349
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>emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on chromosome 9q33.1-34.12
             Contains three novel genes, the 3' end of the LHX2 gene
             for LIM homeobox protein 2 and four CpG islands, complete
             sequence
          Length = 221887

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    cccaccccgcccgccgccgtcc 56
             ||||||||||||||||||||||
Sbjct: 18119 cccaccccgcccgccgccgtcc 18098
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>gb|AC006450.13|AC006450 Homo sapiens chromosome 9, clone RP11-85O21, complete sequence
          Length = 177555

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 35    cccaccccgcccgccgccgtcc 56
             ||||||||||||||||||||||
Sbjct: 33152 cccaccccgcccgccgccgtcc 33173
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>gb|AY106681.1| Zea mays PCO136360 mRNA sequence
          Length = 1141

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 146 cggggtcatcggcatcgtcttc 167
           ||||||||||||||||||||||
Sbjct: 933 cggggtcatcggcatcgtcttc 954
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>gb|AC163391.4| Mus musculus chromosome 3, clone RP23-173N16, complete sequence
          Length = 187855

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    gccagcctgacagccatggcg 104
             |||||||||||||||||||||
Sbjct: 10456 gccagcctgacagccatggcg 10436
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>gb|AC102465.11| Mus musculus chromosome 3, clone RP24-333O23, complete sequence
          Length = 138893

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    gccagcctgacagccatggcg 104
             |||||||||||||||||||||
Sbjct: 25309 gccagcctgacagccatggcg 25289
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>gb|AY103622.1| Zea mays PCO084888 mRNA sequence
          Length = 2801

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                       
Query: 96  gccatggcgatcctcggggagctcgggacggagatcctcatccccgtctgcggggtcatc 155
           |||||||||||||||  || |||||  || ||| | ||||||||||||  ||  ||||||
Sbjct: 88  gccatggcgatcctctcggcgctcgccaccgaggtgctcatccccgtcgccgccgtcatc 147

                        
Query: 156 ggcatcgtcttcg 168
           ||||||| |||||
Sbjct: 148 ggcatcgccttcg 160
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>gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, complete sequence
          Length = 149484

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     gccagcctgacagccatggcg 104
              |||||||||||||||||||||
Sbjct: 110603 gccagcctgacagccatggcg 110583
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>gb|AY022083.1| Oryza sativa microsatellite MRG4408 containing (TC)X15, genomic
           sequence
          Length = 230

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  tcccaccccgcccgccgccg 53
           ||||||||||||||||||||
Sbjct: 227 tcccaccccgcccgccgccg 208
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>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBb0061I18, complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    tcccaccccgcccgccgccg 53
             ||||||||||||||||||||
Sbjct: 14658 tcccaccccgcccgccgccg 14677
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>emb|Z98981.3|SPAC6F6 S.pombe chromosome I cosmid c6F6
          Length = 43307

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   gatcctcggggagctcggga 123
             ||||||||||||||||||||
Sbjct: 21137 gatcctcggggagctcggga 21156
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>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0068A07, from Chromosome 10, complete sequence
          Length = 154505

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcccaccccgcccgccgccg 53
             ||||||||||||||||||||
Sbjct: 10942 tcccaccccgcccgccgccg 10923
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>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 215780

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     cccccctcatcccaccccgc 44
              ||||||||||||||||||||
Sbjct: 101292 cccccctcatcccaccccgc 101311
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>ref|NM_001019330.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC6F6.07c),
           partial mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 gatcctcggggagctcggga 123
           ||||||||||||||||||||
Sbjct: 262 gatcctcggggagctcggga 243
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 34       tcccaccccgcccgccgccg 53
                ||||||||||||||||||||
Sbjct: 12489517 tcccaccccgcccgccgccg 12489498
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                               
Query: 96      gccatggcgatcctcggggagctcgggacggagatcctcatccccgtc 143
               |||||||||||||||  || ||||||||| ||| |  |||||||||||
Sbjct: 3930453 gccatggcgatcctctcggcgctcgggaccgaggtgttcatccccgtc 3930500
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 70      ggtttcgtcggcctgccagc 89
               ||||||||||||||||||||
Sbjct: 2831217 ggtttcgtcggcctgccagc 2831198
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>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete sequence
          Length = 178222

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    gcctgccagcctgacagccatggc 103
             ||||||||||||| ||||||||||
Sbjct: 45785 gcctgccagcctgccagccatggc 45762
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 96    gccatggcgatcctcggggagctcgggacggagatcctcatccccgtc 143
             |||||||||||||||  || ||||||||| ||| |  |||||||||||
Sbjct: 36329 gccatggcgatcctctcggcgctcgggaccgaggtgttcatccccgtc 36376
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>dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F19, full
           insert sequence
          Length = 2738

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 96  gccatggcgatcctcggggagctcgggacggagatcctcatccccgtc 143
           |||||||||||||||  || ||||||||| ||| |  |||||||||||
Sbjct: 107 gccatggcgatcctctcggcgctcgggaccgaggtgttcatccccgtc 154
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>emb|X67030.1|SPRPS13G S.pombe rps13 gene for ribosomal protein S13
          Length = 983

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 gatcctcggggagctcggga 123
           ||||||||||||||||||||
Sbjct: 552 gatcctcggggagctcggga 533
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>emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chromosome 2, complete
             sequence
          Length = 178735

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 25    cccccctcatcccaccccgcccgc 48
             |||||| |||||||||||||||||
Sbjct: 81012 ccccccccatcccaccccgcccgc 80989
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>dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds
          Length = 5985

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 96   gccatggcgatcctcggggagctcgggacggagatcctcatccccgtc 143
            |||||||||||||||  || ||||||||| ||| |  |||||||||||
Sbjct: 1330 gccatggcgatcctctcggcgctcgggaccgaggtgttcatccccgtc 1377
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 34       tcccaccccgcccgccgccg 53
                ||||||||||||||||||||
Sbjct: 12496857 tcccaccccgcccgccgccg 12496838
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>dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase, complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 96  gccatggcgatcctcggggagctcgggacggagatcctcatccccgtc 143
           |||||||||||||||  || ||||||||| ||| |  |||||||||||
Sbjct: 92  gccatggcgatcctctcggcgctcgggaccgaggtgttcatccccgtc 139
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 98      catggcgatcctcggggagctcg 120
               ||||||||||||||| |||||||
Sbjct: 2174932 catggcgatcctcggcgagctcg 2174954
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>gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0115F21, complete sequence
          Length = 128493

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    atcccaccccgcccgccgc 51
             |||||||||||||||||||
Sbjct: 85397 atcccaccccgcccgccgc 85415
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 35      cccaccccgcccgccgccg 53
               |||||||||||||||||||
Sbjct: 2318393 cccaccccgcccgccgccg 2318411



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     ccccgcccgccgccgtccg 57
              |||||||||||||||||||
Sbjct: 323518 ccccgcccgccgccgtccg 323500
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 35     cccaccccgcccgccgccgtccg 57
              |||||| ||||||||||||||||
Sbjct: 261668 cccaccacgcccgccgccgtccg 261646
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      cccaccccgcccgccgccg 53
               |||||||||||||||||||
Sbjct: 1185464 cccaccccgcccgccgccg 1185446



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 39      ccccgcccgccgccgtccg 57
               |||||||||||||||||||
Sbjct: 1054539 ccccgcccgccgccgtccg 1054521
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>ref|XM_387224.1| Gibberella zeae PH-1 chromosome 4 RS13_XENLA 40S RIBOSOMAL PROTEIN
           S13 (FG07048.1) partial mRNA
          Length = 456

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 gatcctcggggagctcggg 122
           |||||||||||||||||||
Sbjct: 262 gatcctcggggagctcggg 244
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>ref|XM_798851.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509855.20) partial mRNA
          Length = 1617

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 130  tcctcatccccgtctgcgg 148
            |||||||||||||||||||
Sbjct: 1302 tcctcatccccgtctgcgg 1320
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>gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome 16, complete sequence
          Length = 192668

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 80    gcctgccagcctgacagccatgg 102
             ||||||||||||| |||||||||
Sbjct: 49891 gcctgccagcctgccagccatgg 49913
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>ref|XM_803328.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510513.30) partial mRNA
          Length = 1617

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 130  tcctcatccccgtctgcgg 148
            |||||||||||||||||||
Sbjct: 1302 tcctcatccccgtctgcgg 1320
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 98      catggcgatcctcggggagctcg 120
               ||||||||||||||| |||||||
Sbjct: 4245255 catggcgatcctcggcgagctcg 4245233
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>gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, complete sequence
          Length = 197295

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 20     tccgtcccccctcatcccacccc 42
              ||||||||||||| |||||||||
Sbjct: 165577 tccgtcccccctcctcccacccc 165599
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>gb|AC015933.9| Homo sapiens chromosome 18, clone CTD-2023G8, complete sequence
          Length = 249021

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     tcccccctcatcccacccc 42
              |||||||||||||||||||
Sbjct: 120715 tcccccctcatcccacccc 120697
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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 98     catggcgatcctcggggagctcg 120
              ||||||||||||||| |||||||
Sbjct: 226701 catggcgatcctcggcgagctcg 226723
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      cccaccccgcccgccgccg 53
               |||||||||||||||||||
Sbjct: 1066948 cccaccccgcccgccgccg 1066930



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     ccccgcccgccgccgtccg 57
              |||||||||||||||||||
Sbjct: 935539 ccccgcccgccgccgtccg 935521
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     ccccgcccgccgccgtccg 57
              |||||||||||||||||||
Sbjct: 211783 ccccgcccgccgccgtccg 211765
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     accccgcccgccgccgtcc 56
              |||||||||||||||||||
Sbjct: 171232 accccgcccgccgccgtcc 171250
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>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2
          Length = 178073

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 39     ccccgcccgccgccgtccg 57
              |||||||||||||||||||
Sbjct: 164098 ccccgcccgccgccgtccg 164116
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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    ccccgcccgccgccgtccg 57
             |||||||||||||||||||
Sbjct: 13976 ccccgcccgccgccgtccg 13958
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>dbj|AB226110.1| Aspergillus oryzae cDNA, contig sequence: AoEST2967
          Length = 1313

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 gatcctcggggagctcggg 122
           |||||||||||||||||||
Sbjct: 628 gatcctcggggagctcggg 610
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 98      catggcgatcctcggggagctcg 120
               |||| ||||||||||||||||||
Sbjct: 1786427 catgtcgatcctcggggagctcg 1786449
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 104    gatcctcggggagctcggg 122
              |||||||||||||||||||
Sbjct: 698760 gatcctcggggagctcggg 698742
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>gb|AC098865.2| Homo sapiens BAC clone RP11-374O3 from 4, complete sequence
          Length = 54348

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    tcccccctcatcccacccc 42
             |||||||||||||||||||
Sbjct: 52877 tcccccctcatcccacccc 52859
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>gb|AC092629.2| Homo sapiens BAC clone RP11-280J8 from 4, complete sequence
          Length = 148673

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  tcccccctcatcccacccc 42
           |||||||||||||||||||
Sbjct: 529 tcccccctcatcccacccc 511
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>gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence
          Length = 209211

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 20    tccgtcccccctcatcccacccc 42
             |||||||||||||| ||||||||
Sbjct: 10596 tccgtcccccctcaccccacccc 10618
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 98      catggcgatcctcggggagctcg 120
               ||||||||||||||| |||||||
Sbjct: 4639445 catggcgatcctcggcgagctcg 4639423
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>dbj|AK075611.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched
            library, clone:0710008A09 product:SWI/SNF related, matrix
            associated, actin dependent regulator of chromatin,
            subfamily d, member 1, full insert sequence
          Length = 2476

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 23   gtcccccctcatcccaccccgcc 45
            ||||||||||| |||||||||||
Sbjct: 1120 gtcccccctcaccccaccccgcc 1142
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 33      atcccaccccgcccgccgc 51
               |||||||||||||||||||
Sbjct: 6522735 atcccaccccgcccgccgc 6522753
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>gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosome 16, complete
             sequence
          Length = 197884

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    tcccccctcatcccacccc 42
             |||||||||||||||||||
Sbjct: 63385 tcccccctcatcccacccc 63367
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 38      accccgcccgccgccgtcc 56
               |||||||||||||||||||
Sbjct: 4053628 accccgcccgccgccgtcc 4053610
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 146    cggggtcatcggcatcgtcttcg 168
              ||||| |||||||||||||||||
Sbjct: 802446 cggggccatcggcatcgtcttcg 802468
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>gb|AC009298.3| Homo sapiens BAC clone RP11-17I6 from 2, complete sequence
          Length = 165242

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 34     tcccaccccgcccgccgcc 52
              |||||||||||||||||||
Sbjct: 103618 tcccaccccgcccgccgcc 103600
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      cccaccccgcccgccgccg 53
               |||||||||||||||||||
Sbjct: 5806820 cccaccccgcccgccgccg 5806802



 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 42      cgcccgccgccgtccggtccgtc 64
               ||||||| |||||||||||||||
Sbjct: 2100551 cgcccgctgccgtccggtccgtc 2100529
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>emb|AJ340490.1|HSA340490 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-WH19R
          Length = 702

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  ccccgcccgccgccgtccg 57
           |||||||||||||||||||
Sbjct: 326 ccccgcccgccgccgtccg 344
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 45      ccgccgccgtccggtccgt 63
               |||||||||||||||||||
Sbjct: 1713058 ccgccgccgtccggtccgt 1713040
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>gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromosome unknown, complete
             sequence
          Length = 173896

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    tcccccctcatcccacccc 42
             |||||||||||||||||||
Sbjct: 46723 tcccccctcatcccacccc 46705
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 146     cggggtcatcggcatcgtcttcg 168
               ||||| |||||||||||||||||
Sbjct: 2406121 cgggggcatcggcatcgtcttcg 2406099
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>dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-402K1, complete
             sequence
          Length = 187735

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    tcccccctcatcccacccc 42
             |||||||||||||||||||
Sbjct: 86202 tcccccctcatcccacccc 86220


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 931,747
Number of Sequences: 3902068
Number of extensions: 931747
Number of successful extensions: 84724
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82558
Number of HSP's gapped (non-prelim): 2166
length of query: 168
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 146
effective length of database: 17,147,199,772
effective search space: 2503491166712
effective search space used: 2503491166712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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