Clone Name | bastl22d07 |
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Clone Library Name | barley_pub |
>VGLB_SHV1 (Q04464) Glycoprotein B precursor| Length = 920 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -1 Query: 449 INRHTTAIILRSRWNTANPPSS 384 I+RH T ++LR R NTA PPSS Sbjct: 886 ISRHLTDMVLRKR-NTARPPSS 906
>PME3_CAEEL (Q867X0) Poly(ADP-ribose) glycohydrolase pme-3 (EC 3.2.1.143) (Poly| ADP-ribose metabolism enzyme 3) Length = 781 Score = 28.9 bits (63), Expect = 6.7 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = +3 Query: 105 MATAVASQPRHFTLGGEPR-AAICAASTSKICTLDKAYGFRFVCRSVVDLRSKKFHSQIS 281 +A VA +P HF GEP AA C ++ D G F + L K F + Sbjct: 697 IAAGVADRPLHFCSFGEPELAAKCKKIIERMKQKDVTLGMLFSMINNTGLPHKHFEFYVF 756 Query: 282 KR-KCYLTSS 308 R YL+SS Sbjct: 757 DRISTYLSSS 766
>ICAM5_RABIT (Q28730) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 912 Score = 28.5 bits (62), Expect = 8.7 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Frame = +3 Query: 141 TLGGEPRAAICAASTSKICTLDKAYGFRFVCRSVVDLRSK---KFHSQISKRKCYLTSSP 311 + GEP A A T+ + + +G F CR+ +DLR + F + + R+ + + P Sbjct: 165 SFAGEPARARGAVLTATVLARREDHGANFSCRAELDLRPQGLALFENSSAPRQLWTYALP 224 Query: 312 SEFEKIILSVRWLEFRRQRI 371 + + +L+ R LE Q + Sbjct: 225 LDSPR-LLAPRVLEVDSQSL 243
>RPOB_ODOSI (P49466) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1379 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/44 (31%), Positives = 28/44 (63%) Frame = +3 Query: 249 LRSKKFHSQISKRKCYLTSSPSEFEKIILSVRWLEFRRQRIAFQ 380 L+S K + +ISK +T+SP + ++I L ++WL+ ++ F+ Sbjct: 200 LKSFKIYQKISK----ITNSPIKVQRIKLFLQWLKLNQKEFNFK 239
>LE756_CAEEL (Q11184) Protein let-756 (Lethal protein 756)| Length = 425 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +3 Query: 357 RRQRIAFQRTGRWVRSIPSASQDDGS-GVSVNGVPQ 461 RR+ F R+G W+ +P + DDGS V V+G + Sbjct: 71 RRRGALFCRSGTWLEMLPIENPDDGSTRVKVHGTKE 106
>MR1B2_BRARE (Q90456) Melatonin receptor type 1B Z6.2 (Fragment)| Length = 157 Score = 28.5 bits (62), Expect = 8.7 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = -3 Query: 318 IPTVNLLSSTFS*KFGNGIFYSLDQQHFCIRI*-IHMLCPGCKSLMCWLRRWLPSVRLRG 142 +P ++L S T+ + + F + I + +H L P C+LR W+ +R+R Sbjct: 35 LPNLSLGSLTYDPRVYSCTFSQTTSAGYTIAVVTVHFLLPIAVVTFCYLRIWVLVLRVRR 94 Query: 141 *SVAAATPRRSPSGL 97 PR PS L Sbjct: 95 RVTTDVRPRLRPSEL 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,137,837 Number of Sequences: 219361 Number of extensions: 1249814 Number of successful extensions: 3034 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3034 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)