ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl22d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR524238.1| Gallus gallus finished cDNA, clone ChEST914n3 46 0.022
2emb|CR387112.1| Gallus gallus finished cDNA, clone ChEST476n8 46 0.022
3ref|XM_956337.1| Neurospora crassa OR74A hypothetical protein (N... 42 0.34
4ref|XM_326836.1| Neurospora crassa OR74A hypothetical protein (N... 42 0.34
5emb|BX035184.1|CNS08ZB8 Single read from an extremity of a full-... 42 0.34
6emb|AL513465.1|NCB13A5 Neurospora crassa DNA linkage group V BAC... 42 0.34
7emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cos... 42 0.34
8gb|AF056116.1|AF056116 Fugu rubripes serine/threonine kinase rec... 42 0.34
9gb|AY650224.1| Dendroica dominica NADH dehydrogenase subunit 2 g... 42 0.34
10gb|AC138720.5| Mus musculus BAC clone RP23-192O12 from chromosom... 42 0.34
11gb|BC085153.1| Mus musculus expressed sequence AI480556, mRNA (c... 40 1.3
12gb|AY666582.1| Dendroica castanea voucher 1B-2528 cytochrome oxi... 40 1.3
13gb|AY666592.1| Dendroica castanea voucher 1B-2518 cytochrome oxi... 40 1.3
14ref|NM_196493.1| Oryza sativa (japonica cultivar-group) contains... 40 1.3
15ref|XM_472238.1| Oryza sativa (japonica cultivar-group), predic... 40 1.3
16gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, c... 40 1.3
17gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete se... 40 1.3
18gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, co... 40 1.3
19emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 40 1.3
20gb|AC127363.3| Mus musculus BAC clone RP23-1D23 from chromosome ... 40 1.3
21gb|BC043138.1| Mus musculus expressed sequence AI480556, mRNA (c... 40 1.3
22gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosom... 40 1.3
23gb|BC054818.1| Mus musculus expressed sequence AI480556, mRNA (c... 40 1.3
24gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, comp... 40 1.3
25ref|NM_025049.2| Homo sapiens chromosome 15 open reading frame 2... 40 1.3
26gb|DQ437529.1| Homo sapiens DNA helicase PIF1 (PIF1) mRNA, compl... 40 1.3
27ref|NM_001008422.1| Mus musculus expressed sequence AI480556 (AI... 40 1.3
28gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome... 40 1.3
29dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
31emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4,... 40 1.3
32gb|AC012072.2| Homo sapiens BAC clone RP11-425J3 from 2, complet... 40 1.3
33gb|AC091582.17| Homo sapiens chromosome 15, clone RP11-483O19, c... 40 1.3
34gb|AC167668.1| Mus musculus BAC clone RP24-241I19 from chromosom... 40 1.3
35gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 40 1.3
36dbj|AK111779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.3
37gb|AY650183.1| Dendroica castanea NADH dehydrogenase subunit 2 g... 40 1.3
38gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 1.3
39gb|BC079873.1| Mus musculus cDNA clone IMAGE:6832729, containing... 40 1.3
40gb|BC033254.1| Homo sapiens chromosome 15 open reading frame 20,... 40 1.3
41gb|AY498716.1| Homo sapiens PIF1/RRM3 DNA helicase-like protein ... 40 1.3
42gb|BC042576.1| Mus musculus expressed sequence AI480556, mRNA (c... 40 1.3
43gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermedia... 40 1.3
44ref|NM_196133.1| Oryza sativa (japonica cultivar-group) hypothet... 38 5.3
45ref|NM_192607.1| Oryza sativa (japonica cultivar-group), predic... 38 5.3
46ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predic... 38 5.3
47gb|U63834.1|HSU63834 Human KIT protein and alternatively spliced... 38 5.3
48ref|XM_953949.1| Neurospora crassa OR74A hypothetical protein (N... 38 5.3
49ref|XM_327814.1| Neurospora crassa OR74A hypothetical protein (N... 38 5.3
50gb|AC118216.15| Mus musculus chromosome 1, clone RP23-209N14, co... 38 5.3
51gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome... 38 5.3
52gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, com... 38 5.3
53gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 38 5.3
54emb|CR662939.3|CNS0FAHT Tetraodon nigroviridis full-length cDNA 38 5.3
55gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.3
56emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 38 5.3
57emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4,... 38 5.3
58gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, comp... 38 5.3
59dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
60gb|AC116926.1| Genomic sequence for Oryza sativa (japonica culti... 38 5.3
61gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar N... 38 5.3
62gb|AC016399.9| Homo sapiens chromosome 10 clone RP11-70E21, comp... 38 5.3
63gb|AC004655.1| Homo sapiens Xp22-140-141 BAC GSHB-128G5 (Genome ... 38 5.3
64gb|AC079168.22| Homo sapiens Xp BAC RP11-753E22 (Roswell Park Ca... 38 5.3
65gb|AC092545.3| Homo sapiens BAC clone RP11-586A2 from 4, complet... 38 5.3
66gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 38 5.3
67gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, r... 38 5.3
68dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
69dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
70dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
71dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
72dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
73gb|AC018900.8|AC018900 Homo sapiens chromosome 15 clone RP11-198... 38 5.3
74gb|AC138080.4| Homo sapiens chromosome 8, clone RP11-1147M13, co... 38 5.3
75dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
76dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
77dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
78gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, comp... 38 5.3
79dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
80dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
81dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
82dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
83dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
84gb|AY923918.1| Haliotis pustulata isolate H15 cytochrome oxidase... 38 5.3
85emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chr... 38 5.3
86dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.3
87dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.3
88dbj|AK108902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.3
89dbj|AK063469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.3
90gb|AC171179.2| Gallus gallus BAC clone CH261-31A13 from chromoso... 38 5.3
91gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 ... 38 5.3
92gb|AC116555.23| Mus musculus strain C57BL/6J clone rp23-160b14 m... 38 5.3
93dbj|AP006245.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 38 5.3
94gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 38 5.3
95gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome ... 38 5.3
96gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.3
97emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4,... 38 5.3
98gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosom... 38 5.3
99dbj|AP000079.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 38 5.3 
>emb|CR524238.1| Gallus gallus finished cDNA, clone ChEST914n3
          Length = 1126

 Score = 46.1 bits (23), Expect = 0.022
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 40  cccgtcctccccgtcctcctgctcctttccc 70
           |||||||||| | ||||||||||||||||||
Sbjct: 473 cccgtcctcctcttcctcctgctcctttccc 443
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>emb|CR387112.1| Gallus gallus finished cDNA, clone ChEST476n8
          Length = 746

 Score = 46.1 bits (23), Expect = 0.022
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 40  cccgtcctccccgtcctcctgctcctttccc 70
           |||||||||| | ||||||||||||||||||
Sbjct: 132 cccgtcctcctcttcctcctgctcctttccc 102
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>ref|XM_956337.1| Neurospora crassa OR74A hypothetical protein (NCU01344.1) partial
           mRNA
          Length = 1599

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 45  cctccccgtcctcctgctcctttcc 69
           |||||||||||||||| ||||||||
Sbjct: 659 cctccccgtcctcctgttcctttcc 635
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>ref|XM_326836.1| Neurospora crassa OR74A hypothetical protein (NCU01344.1) partial
           mRNA
          Length = 1599

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 45  cctccccgtcctcctgctcctttcc 69
           |||||||||||||||| ||||||||
Sbjct: 659 cctccccgtcctcctgttcctttcc 635
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>emb|BX035184.1|CNS08ZB8 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA6BF08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 341

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  ctcctgctcctttccctcgcc 75
           |||||||||||||||||||||
Sbjct: 282 ctcctgctcctttccctcgcc 302
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>emb|AL513465.1|NCB13A5 Neurospora crassa DNA linkage group V BAC clone B13A5
          Length = 72305

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 45    cctccccgtcctcctgctcctttcc 69
             |||||||||||||||| ||||||||
Sbjct: 23229 cctccccgtcctcctgttcctttcc 23253
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>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11
          Length = 74317

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 45    cctccccgtcctcctgctcctttcc 69
             |||||||||||||||| ||||||||
Sbjct: 67635 cctccccgtcctcctgttcctttcc 67659
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>gb|AF056116.1|AF056116 Fugu rubripes serine/threonine kinase receptor type1, All-1 related
            protein (ALR), fugu hedgehog (fhh), Ikaros-like, wnt1,
            wnt10b, ARF3, erbB3, PAS1, and L41 ribosomal protein
            genes, complete cds; LRP1 gene, partial cds; and unknown
            genes
          Length = 148640

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 39   ccccgtcctccccgtcctcct 59
            |||||||||||||||||||||
Sbjct: 6542 ccccgtcctccccgtcctcct 6522
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>gb|AY650224.1| Dendroica dominica NADH dehydrogenase subunit 2 gene, complete cds;
            tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr
            genes, complete sequence; cytochrome oxidase subunit I
            gene, complete cds; tRNA-Ser and tRNA-Asp genes, complete
            sequence; cytochrome oxidase subunit II gene, complete
            cds; tRNA-Lys gene, complete sequence; and ATP synthase 8
            and ATP synthase 6 genes, complete cds; mitochondrial
          Length = 4694

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 52   gtcctcctgctcctttccctc 72
            |||||||||||||||||||||
Sbjct: 1979 gtcctcctgctcctttccctc 1999
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>gb|AC138720.5| Mus musculus BAC clone RP23-192O12 from chromosome 3, complete sequence
          Length = 191825

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     ccccgtcctccccgtcctcct 59
              |||||||||||||||||||||
Sbjct: 115264 ccccgtcctccccgtcctcct 115244
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>gb|BC085153.1| Mus musculus expressed sequence AI480556, mRNA (cDNA clone MGC:109685
            IMAGE:6837651), complete cds
          Length = 4195

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 42   cgtcctccccgtcctcctgctcct 65
            |||||||| |||||||||||||||
Sbjct: 2476 cgtcctcctcgtcctcctgctcct 2499
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>gb|AY666582.1| Dendroica castanea voucher 1B-2528 cytochrome oxidase subunit 1
           (COI) gene, partial cds; mitochondrial
          Length = 694

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  gtcctcctgctcctttccct 71
           ||||||||||||||||||||
Sbjct: 527 gtcctcctgctcctttccct 546
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>gb|AY666592.1| Dendroica castanea voucher 1B-2518 cytochrome oxidase subunit 1
           (COI) gene, partial cds; mitochondrial
          Length = 694

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  gtcctcctgctcctttccct 71
           ||||||||||||||||||||
Sbjct: 527 gtcctcctgctcctttccct 546
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>ref|NM_196493.1| Oryza sativa (japonica cultivar-group) contains similarity to
           histone acetyltransferase GCN5 (OSJNBa0032I20.6), mRNA
          Length = 1752

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  cccgtcctccccgtcctcct 59
           ||||||||||||||||||||
Sbjct: 174 cccgtcctccccgtcctcct 193
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>ref|XM_472238.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2133

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tcctcctgctcctttccctc 72
           ||||||||||||||||||||
Sbjct: 206 tcctcctgctcctttccctc 187
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>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence
          Length = 182534

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ccccgtcctccccgtcctcc 58
              ||||||||||||||||||||
Sbjct: 145171 ccccgtcctccccgtcctcc 145190



 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ccccgtcctccccgtcctcc 58
              ||||||||||||||||||||
Sbjct: 145162 ccccgtcctccccgtcctcc 145181
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>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence
          Length = 385816

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ccccgtcctccccgtcctcc 58
              ||||||||||||||||||||
Sbjct: 260007 ccccgtcctccccgtcctcc 260026
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>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence
          Length = 204108

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 44    tcctccccgtcctcctgctcctttccct 71
             |||||||| ||||||| |||||||||||
Sbjct: 56904 tcctccccctcctcctcctcctttccct 56931
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>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     ccccgtcctccccgtcctcc 58
              ||||||||||||||||||||
Sbjct: 132644 ccccgtcctccccgtcctcc 132625



 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ccccgtcctccccgtcctcc 58
              ||||||||||||||||||||
Sbjct: 105574 ccccgtcctccccgtcctcc 105593
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>gb|AC127363.3| Mus musculus BAC clone RP23-1D23 from chromosome 8, complete sequence
          Length = 180977

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    tcctcctgctcctttccctc 72
             ||||||||||||||||||||
Sbjct: 73199 tcctcctgctcctttccctc 73218
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>gb|BC043138.1| Mus musculus expressed sequence AI480556, mRNA (cDNA clone
            IMAGE:6821344), containing frame-shift errors
          Length = 4233

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 42   cgtcctccccgtcctcctgctcct 65
            |||||||| |||||||||||||||
Sbjct: 2506 cgtcctcctcgtcctcctgctcct 2529
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>gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosome 7, complete sequence
          Length = 188677

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 42    cgtcctccccgtcctcctgctcct 65
             |||||||| |||||||||||||||
Sbjct: 51327 cgtcctcctcgtcctcctgctcct 51304
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>gb|BC054818.1| Mus musculus expressed sequence AI480556, mRNA (cDNA clone
            IMAGE:4527847), partial cds
          Length = 6474

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 42   cgtcctccccgtcctcctgctcct 65
            |||||||| |||||||||||||||
Sbjct: 4756 cgtcctcctcgtcctcctgctcct 4779
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>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence
          Length = 188718

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ccccgtcctccccgtcctcc 58
              ||||||||||||||||||||
Sbjct: 122331 ccccgtcctccccgtcctcc 122350



 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ccccgtcctccccgtcctcc 58
              ||||||||||||||||||||
Sbjct: 122322 ccccgtcctccccgtcctcc 122341
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>ref|NM_025049.2| Homo sapiens chromosome 15 open reading frame 20 (C15orf20), mRNA
          Length = 2659

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   cctccccgtcctcctgctcc 64
            ||||||||||||||||||||
Sbjct: 2031 cctccccgtcctcctgctcc 2050
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>gb|DQ437529.1| Homo sapiens DNA helicase PIF1 (PIF1) mRNA, complete cds
          Length = 2052

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   cctccccgtcctcctgctcc 64
            ||||||||||||||||||||
Sbjct: 1965 cctccccgtcctcctgctcc 1984
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>ref|NM_001008422.1| Mus musculus expressed sequence AI480556 (AI480556), mRNA
          Length = 4195

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 42   cgtcctccccgtcctcctgctcct 65
            |||||||| |||||||||||||||
Sbjct: 2476 cgtcctcctcgtcctcctgctcct 2499
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>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete
            sequence
          Length = 167114

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 39   ccccgtcctccccgtcctcctgctcctt 66
            |||| |||||||||||||||| ||||||
Sbjct: 9881 ccccctcctccccgtcctcctcctcctt 9854
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 53       tcctcctgctcctttccctc 72
                ||||||||||||||||||||
Sbjct: 18665789 tcctcctgctcctttccctc 18665770



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 50       ccgtcctcctgctcctttccctc 72
                |||||||||||||||| ||||||
Sbjct: 24496791 ccgtcctcctgctcctctccctc 24496769
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 40       cccgtcctccccgtcctcct 59
                ||||||||||||||||||||
Sbjct: 14041087 cccgtcctccccgtcctcct 14041068



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 47       tccccgtcctcctgctcct 65
                |||||||||||||||||||
Sbjct: 11310709 tccccgtcctcctgctcct 11310727
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>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21,
             complete sequence
          Length = 160456

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    tcctcctgctcctttccctc 72
             ||||||||||||||||||||
Sbjct: 14927 tcctcctgctcctttccctc 14908
to top
>gb|AC012072.2| Homo sapiens BAC clone RP11-425J3 from 2, complete sequence
          Length = 105686

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     atgctctgctcttactagat 26
             ||||||||||||||||||||
Sbjct: 89684 atgctctgctcttactagat 89665
to top
>gb|AC091582.17| Homo sapiens chromosome 15, clone RP11-483O19, complete sequence
          Length = 90065

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    cctccccgtcctcctgctcc 64
             ||||||||||||||||||||
Sbjct: 64516 cctccccgtcctcctgctcc 64497
to top
>gb|AC167668.1| Mus musculus BAC clone RP24-241I19 from chromosome 14, complete
             sequence
          Length = 173679

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 39    ccccgtcctccccgtcctcctgctcctt 66
             |||| |||||||||||||||| ||||||
Sbjct: 48488 ccccctcctccccgtcctcctcctcctt 48515
to top
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    cccgtcctccccgtcctcct 59
             ||||||||||||||||||||
Sbjct: 57216 cccgtcctccccgtcctcct 57197
to top
>dbj|AK111779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H10, full
           insert sequence
          Length = 1691

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  cccgtcctccccgtcctcct 59
           ||||||||||||||||||||
Sbjct: 289 cccgtcctccccgtcctcct 308
to top
>gb|AY650183.1| Dendroica castanea NADH dehydrogenase subunit 2 gene, complete cds;
            tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr
            genes, complete sequence; cytochrome oxidase subunit I
            gene, complete cds; tRNA-Ser and tRNA-Asp genes, complete
            sequence; cytochrome oxidase subunit II gene, complete
            cds; tRNA-Lys gene, complete sequence; and ATP synthase 8
            and ATP synthase 6 genes, complete cds; mitochondrial
          Length = 4698

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   gtcctcctgctcctttccct 71
            ||||||||||||||||||||
Sbjct: 1979 gtcctcctgctcctttccct 1998
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 40       cccgtcctccccgtcctcct 59
                ||||||||||||||||||||
Sbjct: 14049329 cccgtcctccccgtcctcct 14049310



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 47       tccccgtcctcctgctcct 65
                |||||||||||||||||||
Sbjct: 11317149 tccccgtcctcctgctcct 11317167
to top
>gb|BC079873.1| Mus musculus cDNA clone IMAGE:6832729, containing frame-shift errors
          Length = 4229

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 42   cgtcctccccgtcctcctgctcct 65
            |||||||| |||||||||||||||
Sbjct: 2494 cgtcctcctcgtcctcctgctcct 2517
to top
>gb|BC033254.1| Homo sapiens chromosome 15 open reading frame 20, mRNA (cDNA clone
           IMAGE:5445559)
          Length = 1564

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  cctccccgtcctcctgctcc 64
           ||||||||||||||||||||
Sbjct: 925 cctccccgtcctcctgctcc 944
to top
>gb|AY498716.1| Homo sapiens PIF1/RRM3 DNA helicase-like protein (PIF1) mRNA,
            complete cds
          Length = 2606

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   cctccccgtcctcctgctcc 64
            ||||||||||||||||||||
Sbjct: 1984 cctccccgtcctcctgctcc 2003
to top
>gb|BC042576.1| Mus musculus expressed sequence AI480556, mRNA (cDNA clone MGC:25611
            IMAGE:4160122), complete cds
          Length = 4052

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 42   cgtcctccccgtcctcctgctcct 65
            |||||||| |||||||||||||||
Sbjct: 2334 cgtcctcctcgtcctcctgctcct 2357
to top
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control
            protein (BICP4) gene, complete cds
          Length = 8113

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   ccccgtcctccccgtcctcc 58
            ||||||||||||||||||||
Sbjct: 5457 ccccgtcctccccgtcctcc 5438
to top
>ref|NM_196133.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OJ1341F06.13), mRNA
          Length = 327

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 47  tccccgtcctcctgctcct 65
           |||||||||||||||||||
Sbjct: 272 tccccgtcctcctgctcct 290
to top
>ref|NM_192607.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 612

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 44  tcctccccgtcctcctgct 62
           |||||||||||||||||||
Sbjct: 569 tcctccccgtcctcctgct 551
to top
>ref|NM_189191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3582

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 90  ctccgacgagatcgacggatgcggcgg 116
           ||||||||||||| |||| ||||||||
Sbjct: 63  ctccgacgagatccacggctgcggcgg 89
to top
>gb|U63834.1|HSU63834 Human KIT protein and alternatively spliced KIT protein (KIT) gene,
             complete cds
          Length = 89603

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 45    cctccccgtcctcctgctc 63
             |||||||||||||||||||
Sbjct: 56438 cctccccgtcctcctgctc 56420
to top
>ref|XM_953949.1| Neurospora crassa OR74A hypothetical protein (NCU07529.1) partial
           mRNA
          Length = 636

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 43  gtcctccccgtcctcctgctcct 65
           |||||||| ||||||||||||||
Sbjct: 607 gtcctcccggtcctcctgctcct 585
to top
>ref|XM_327814.1| Neurospora crassa OR74A hypothetical protein (NCU07529.1) partial
           mRNA
          Length = 636

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 43  gtcctccccgtcctcctgctcct 65
           |||||||| ||||||||||||||
Sbjct: 607 gtcctcccggtcctcctgctcct 585
to top
>gb|AC118216.15| Mus musculus chromosome 1, clone RP23-209N14, complete sequence
          Length = 269784

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 45     cctccccgtcctcctgctcctttccct 71
              ||||||| ||||||| |||||||||||
Sbjct: 206557 cctccccctcctcctcctcctttccct 206531
to top
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057E15, complete sequence
          Length = 149035

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 43    gtcctccccgtcctcctgctcct 65
             ||||||||||||||||| |||||
Sbjct: 97487 gtcctccccgtcctcctcctcct 97465
to top
>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence
          Length = 170409

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     tcctccccgtcctcctgct 62
              |||||||||||||||||||
Sbjct: 117308 tcctccccgtcctcctgct 117290
to top
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    tcctccccgtcctcctgct 62
             |||||||||||||||||||
Sbjct: 20879 tcctccccgtcctcctgct 20897
to top
>emb|CR662939.3|CNS0FAHT Tetraodon nigroviridis full-length cDNA
          Length = 1168

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 40   cccgtcctccccgtcctcc 58
            |||||||||||||||||||
Sbjct: 1002 cccgtcctccccgtcctcc 1020
to top
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02,
              complete sequence
          Length = 131922

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     tccccgtcctcctgctcct 65
              |||||||||||||||||||
Sbjct: 118697 tccccgtcctcctgctcct 118715
to top
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 42     cgtcctccccgtcctcctgctcc 64
              |||||||||||||||| ||||||
Sbjct: 236995 cgtcctccccgtcctcgtgctcc 236973
to top
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16,
             complete sequence
          Length = 146313

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 50    ccgtcctcctgctcctttccctc 72
             |||||||||||||||| ||||||
Sbjct: 56422 ccgtcctcctgctcctctccctc 56400
to top
>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence
          Length = 176188

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 53   tcctcctgctcctttccct 71
            |||||||||||||||||||
Sbjct: 3760 tcctcctgctcctttccct 3778
to top
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004G10
          Length = 150379

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    tcctccccgtcctcctgct 62
             |||||||||||||||||||
Sbjct: 53417 tcctccccgtcctcctgct 53435
to top
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1341F06, from chromosome 10, complete
             sequence
          Length = 102520

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    tccccgtcctcctgctcct 65
             |||||||||||||||||||
Sbjct: 55746 tccccgtcctcctgctcct 55728
to top
>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
            OSJNBa0091J06 from chromosome 10, complete sequence
          Length = 141911

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 47   tccccgtcctcctgctcct 65
            |||||||||||||||||||
Sbjct: 3780 tccccgtcctcctgctcct 3798
to top
>gb|AC016399.9| Homo sapiens chromosome 10 clone RP11-70E21, complete sequence
          Length = 173239

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    tcctcctgctcctttccct 71
             |||||||||||||||||||
Sbjct: 28913 tcctcctgctcctttccct 28895
to top
>gb|AC004655.1| Homo sapiens Xp22-140-141 BAC GSHB-128G5 (Genome Systems Human BAC
             library) complete sequence
          Length = 134929

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    tcctcctgctcctttccct 71
             |||||||||||||||||||
Sbjct: 87863 tcctcctgctcctttccct 87845
to top
>gb|AC079168.22| Homo sapiens Xp BAC RP11-753E22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 151012

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 53   tcctcctgctcctttccct 71
            |||||||||||||||||||
Sbjct: 1101 tcctcctgctcctttccct 1119
to top
>gb|AC092545.3| Homo sapiens BAC clone RP11-586A2 from 4, complete sequence
          Length = 96638

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 45    cctccccgtcctcctgctc 63
             |||||||||||||||||||
Sbjct: 10492 cctccccgtcctcctgctc 10474
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 85      gctgtctccgacgagatcgacgg 107
               ||||||||||||| |||||||||
Sbjct: 2094829 gctgtctccgacgcgatcgacgg 2094807
to top
>gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone
              BACR17D02, complete sequence
          Length = 186748

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 61     ctcctttccctcgccgctttctc 83
              ||||||||||||||| |||||||
Sbjct: 129041 ctcctttccctcgcccctttctc 129019
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 43       gtcctccccgtcctcctgctcct 65
                ||||||||||||||||| |||||
Sbjct: 16456888 gtcctccccgtcctcctcctcct 16456866
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 41       ccgtcctccccgtcctcct 59
                |||||||||||||||||||
Sbjct: 19845283 ccgtcctccccgtcctcct 19845265
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                           
Query: 38       accccgtcctccccgtcctcctgctcc 64
                ||||| ||||||||||| |||||||||
Sbjct: 12678594 accccttcctccccgtcatcctgctcc 12678620
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 44       tcctccccgtcctcctgct 62
                |||||||||||||||||||
Sbjct: 25761506 tcctccccgtcctcctgct 25761488
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 44       tcctccccgtcctcctgct 62
                |||||||||||||||||||
Sbjct: 23286357 tcctccccgtcctcctgct 23286375



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 20       actagatccgatctatgga 38
                |||||||||||||||||||
Sbjct: 11036922 actagatccgatctatgga 11036904



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                           
Query: 90       ctccgacgagatcgacggatgcggcgg 116
                ||||||||||||| |||| ||||||||
Sbjct: 11036846 ctccgacgagatccacggctgcggcgg 11036820



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 44      tcctccccgtcctcctgct 62
               |||||||||||||||||||
Sbjct: 8056766 tcctccccgtcctcctgct 8056784
to top
>gb|AC018900.8|AC018900 Homo sapiens chromosome 15 clone RP11-198M11 map 15q21.1, complete
             sequence
          Length = 177657

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    ctctgctcttactagatcc 28
             |||||||||||||||||||
Sbjct: 64499 ctctgctcttactagatcc 64517
to top
>gb|AC138080.4| Homo sapiens chromosome 8, clone RP11-1147M13, complete sequence
          Length = 164872

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    cctcctgctcctttccctc 72
             |||||||||||||||||||
Sbjct: 24846 cctcctgctcctttccctc 24864
to top
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    actagatccgatctatgga 38
             |||||||||||||||||||
Sbjct: 65804 actagatccgatctatgga 65786



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 90    ctccgacgagatcgacggatgcggcgg 116
             ||||||||||||| |||| ||||||||
Sbjct: 65728 ctccgacgagatccacggctgcggcgg 65702
to top
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0487H02
          Length = 145491

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 20     actagatccgatctatgga 38
              |||||||||||||||||||
Sbjct: 139764 actagatccgatctatgga 139746



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 90     ctccgacgagatcgacggatgcggcgg 116
              ||||||||||||| |||| ||||||||
Sbjct: 139688 ctccgacgagatccacggctgcggcgg 139662
to top
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0433E10
          Length = 144643

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    ccgtcctccccgtcctcct 59
             |||||||||||||||||||
Sbjct: 13461 ccgtcctccccgtcctcct 13443
to top
>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence
          Length = 130466

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     tcctccccgtcctcctgct 62
              |||||||||||||||||||
Sbjct: 115721 tcctccccgtcctcctgct 115703
to top
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1103C09
          Length = 163996

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    tcctccccgtcctcctgct 62
             |||||||||||||||||||
Sbjct: 12055 tcctccccgtcctcctgct 12073
to top
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451D05
          Length = 148381

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    tcctccccgtcctcctgct 62
             |||||||||||||||||||
Sbjct: 73099 tcctccccgtcctcctgct 73117
to top
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0492E07
          Length = 143794

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 38    accccgtcctccccgtcctcctgctcc 64
             ||||| ||||||||||| |||||||||
Sbjct: 53064 accccttcctccccgtcatcctgctcc 53090
to top
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0010C01
          Length = 186185

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     tcctccccgtcctcctgct 62
              |||||||||||||||||||
Sbjct: 164182 tcctccccgtcctcctgct 164164
to top
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1112_G03
          Length = 106401

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   tcctccccgtcctcctgct 62
            |||||||||||||||||||
Sbjct: 8112 tcctccccgtcctcctgct 8094
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>gb|AY923918.1| Haliotis pustulata isolate H15 cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial
          Length = 549

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 50  ccgtcctcctgctcctttccctc 72
           |||||||||| ||||||||||||
Sbjct: 477 ccgtcctcctactcctttccctc 499
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>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete
              sequence
          Length = 189900

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 39     ccccgtcctccccgtcctcctgctcct 65
              ||||||||||||| ||||||| |||||
Sbjct: 102045 ccccgtcctccccctcctcctcctcct 102071
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0007M04
          Length = 176293

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     ccgtcctccccgtcctcct 59
              |||||||||||||||||||
Sbjct: 174234 ccgtcctccccgtcctcct 174216
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>dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N01, full
           insert sequence
          Length = 3214

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 43  gtcctccccgtcctcctgctcct 65
           ||||||||||||||||| |||||
Sbjct: 311 gtcctccccgtcctcctcctcct 289
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>dbj|AK108902.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-F07, full
           insert sequence
          Length = 883

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 47  tccccgtcctcctgctcct 65
           |||||||||||||||||||
Sbjct: 390 tccccgtcctcctgctcct 408
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>dbj|AK063469.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-A03,
          full insert sequence
          Length = 1925

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 50 ccgtcctcctgctcctttccctc 72
          |||||||||||||||| ||||||
Sbjct: 58 ccgtcctcctgctcctctccctc 80
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>gb|AC171179.2| Gallus gallus BAC clone CH261-31A13 from chromosome ul, complete
             sequence
          Length = 247380

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    tcctcctgctcctttccct 71
             |||||||||||||||||||
Sbjct: 29124 tcctcctgctcctttccct 29142
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>gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 of 74 of the complete
              sequence
          Length = 299804

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 61     ctcctttccctcgccgctttctc 83
              ||||||||||||||| |||||||
Sbjct: 184214 ctcctttccctcgcccctttctc 184192
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>gb|AC116555.23| Mus musculus strain C57BL/6J clone rp23-160b14 map 8, complete sequence
          Length = 209784

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 39    ccccgtcctccccgtcctcctgctcct 65
             |||| |||||||| |||||||||||||
Sbjct: 77668 ccccctcctccccctcctcctgctcct 77642
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>dbj|AP006245.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-139F9, complete
             sequence
          Length = 155586

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    cctcctgctcctttccctc 72
             |||||||||||||||||||
Sbjct: 95596 cctcctgctcctttccctc 95614
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    ccctcgccgctttctccgc 86
             |||||||||||||||||||
Sbjct: 13238 ccctcgccgctttctccgc 13256
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>gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome 8, complete sequence
          Length = 228830

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 39     ccccgtcctccccgtcctcctgctcct 65
              |||| |||||||| |||||||||||||
Sbjct: 149945 ccccctcctccccctcctcctgctcct 149919
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 43       gtcctccccgtcctcctgctcct 65
                ||||||||||||||||| |||||
Sbjct: 16547892 gtcctccccgtcctcctcctcct 16547870
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>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20,
             complete sequence
          Length = 116983

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 50    ccgtcctcctgctcctttccctc 72
             |||||||||||||||| ||||||
Sbjct: 90113 ccgtcctcctgctcctctccctc 90091
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>gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosome 6, complete sequence
          Length = 185966

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 39    ccccgtcctccccgtcctcctgctcct 65
             ||||||||||| | |||||||||||||
Sbjct: 81149 ccccgtcctcctcctcctcctgctcct 81175



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 39    ccccgtcctccccgtcctcctgctcct 65
             ||||||||||| | |||||||||||||
Sbjct: 81065 ccccgtcctcctcctcctcctgctcct 81091



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 39    ccccgtcctccccgtcctcctgctcct 65
             ||||||||||| | |||||||||||||
Sbjct: 80966 ccccgtcctcctcctcctcctgctcct 80992



 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 39    ccccgtcctccccgtcctcctgctcct 65
             ||||||||||| | |||||||||||||
Sbjct: 80858 ccccgtcctcctcctcctcctgctcct 80884
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>dbj|AP000079.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 15/19, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    cctcctgctcctttccctc 72
             |||||||||||||||||||
Sbjct: 59694 cctcctgctcctttccctc 59676


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 708,739
Number of Sequences: 3902068
Number of extensions: 708739
Number of successful extensions: 66787
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66197
Number of HSP's gapped (non-prelim): 590
length of query: 116
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 95
effective length of database: 17,151,101,840
effective search space: 1629354674800
effective search space used: 1629354674800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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