ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22d05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 tgtccatcgccgccgccgccggc 276 ||||||||||||||||||||||| Sbjct: 7926940 tgtccatcgccgccgccgccggc 7926962 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 27805987 gtccatcgccgccgccgccg 27805968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgccgccgccgccggcaacc 280 |||||||||||||||||||| Sbjct: 24070189 cgccgccgccgccggcaacc 24070208 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 21844520 ccatcgccgccgccgccggc 21844501 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 21808472 ctcttctccttcttcacctt 21808453
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 tgtccatcgccgccgccgccggc 276 ||||||||||||||||||||||| Sbjct: 34458 tgtccatcgccgccgccgccggc 34480
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 tgtccatcgccgccgccgccggc 276 ||||||||||||||||||||||| Sbjct: 141322 tgtccatcgccgccgccgccggc 141344
>gb|AF451895.1| Zea mays LIGULELESS1 (lg1) gene, complete cds Length = 7142 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 tcgccgccgccgccggcaaccc 281 |||||||||||||||||||||| Sbjct: 3739 tcgccgccgccgccggcaaccc 3760
>gb|U89496.1|ZMU89496 Zea mays liguleless1 protein (liguleless1) mRNA, complete cds Length = 1411 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 tcgccgccgccgccggcaaccc 281 |||||||||||||||||||||| Sbjct: 346 tcgccgccgccgccggcaaccc 367
>emb|AL831766.3| Mouse DNA sequence from clone RP23-209N3 on chromosome 2, complete sequence Length = 178227 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 taactccagttccttcttggtg 429 |||||||||||||||||||||| Sbjct: 130949 taactccagttccttcttggtg 130970
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 gtccatcgccgccgccgccggcaac 279 ||||| ||||||||||||||||||| Sbjct: 43661 gtccaccgccgccgccgccggcaac 43685
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaacc 280 ||||||||||||||||||||| Sbjct: 91201 tcgccgccgccgccggcaacc 91181
>gb|AY731532.1| Arachis hypogaea clone PM714 microsatellite sequence Length = 299 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 cgccgccgccgccggcaaccc 281 ||||||||||||||||||||| Sbjct: 163 cgccgccgccgccggcaaccc 183
>ref|XM_422083.1| PREDICTED: Gallus gallus similar to Band4.1-like5 protein (LOC424235), mRNA Length = 2208 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ccgccgccgccggcaacccgc 283 ||||||||||||||||||||| Sbjct: 57 ccgccgccgccggcaacccgc 77
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgccc 285 ||||||||||||| ||||||||||| Sbjct: 1185256 cgccgccgccgcctgcaacccgccc 1185232 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 27390176 tcgccgccgccgccggcaac 27390157 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 21179161 catcgccgccgccgccggca 21179180 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 463033 ccatcgccgccgccgccggc 463052
>ref|XM_381678.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01502.1) partial mRNA Length = 834 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 411 ctccagttccttcttggtggt 431 ||||||||||||||||||||| Sbjct: 673 ctccagttccttcttggtggt 653
>ref|XM_766450.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_630_17782_16889) partial mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcaccttg 240 ||||||||||||||||||||| Sbjct: 441 ctcttctccttcttcaccttg 421
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 atcgccgccgccgccggcaac 279 ||||||||||||||||||||| Sbjct: 2493726 atcgccgccgccgccggcaac 2493746
>emb|Y13383.2|BPHYPLCRD Bordetella pertussis DNA for putative pathogenicity island coding for type III secretion system and flanking house keeping genes Length = 35026 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccagccggccagggtcagcag 114 ||||||||||||||||||||| Sbjct: 3063 ccagccggccagggtcagcag 3083
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccagccggccagggtcagcag 114 ||||||||||||||||||||| Sbjct: 166335 ccagccggccagggtcagcag 166355
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccagccggccagggtcagcag 114 ||||||||||||||||||||| Sbjct: 115535 ccagccggccagggtcagcag 115555
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ccagccggccagggtcagcag 114 ||||||||||||||||||||| Sbjct: 306484 ccagccggccagggtcagcag 306464
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 acccatggcttctcggtgccg 213 ||||||||||||||||||||| Sbjct: 3434207 acccatggcttctcggtgccg 3434227
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgccc 285 ||||||||||||| ||||||||||| Sbjct: 88960 cgccgccgccgcctgcaacccgccc 88936
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 tgtccatcgccgccgccgccg 274 ||||||||||||||||||||| Sbjct: 23550382 tgtccatcgccgccgccgccg 23550362 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 10226752 catcgccgccgccgccggca 10226733 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 4215348 ccatcgccgccgccgccggc 4215329 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 2855210 ccatcgccgccgccgccggc 2855229
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 tcgccgccgccgccggcaacc 280 ||||||||||||||||||||| Sbjct: 4903692 tcgccgccgccgccggcaacc 4903712 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 25548819 gtccatcgccgccgccgccg 25548800 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 8024222 ccatcgccgccgccgccggc 8024241
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 gtccatcgccgccgccgccggcaac 279 ||||| ||||||||||||||||||| Sbjct: 18645785 gtccaccgccgccgccgccggcaac 18645809
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgccc 285 ||||||||||||| ||||||||||| Sbjct: 1185254 cgccgccgccgcctgcaacccgccc 1185230 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 27481499 tcgccgccgccgccggcaac 27481480 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 21172190 catcgccgccgccgccggca 21172209 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 463031 ccatcgccgccgccgccggc 463050
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 tccatcgccgccgccgccggc 276 ||||||||||||||||||||| Sbjct: 7429525 tccatcgccgccgccgccggc 7429545 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 30775139 gtccatcgccgccgccgccg 30775158 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 7097090 gtccatcgccgccgccgccg 7097071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 5492663 tcgccgccgccgccggcaac 5492644
>gb|AC084543.1|CBRG28M02 Caenorhabditis briggsae cosmid G28M02, complete sequence Length = 44796 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 ctcttctccttcttcaccttgttct 244 |||||||||||||||||||| |||| Sbjct: 16271 ctcttctccttcttcaccttcttct 16247
>gb|AE004814.1| Pseudomonas aeruginosa PAO1, section 375 of 529 of the complete genome Length = 10042 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 cagccggccagggtcagcagg 115 ||||||||||||||||||||| Sbjct: 8642 cagccggccagggtcagcagg 8622
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 tccatcgccgccgccgccggc 276 ||||||||||||||||||||| Sbjct: 23231 tccatcgccgccgccgccggc 23251
>dbj|AP004857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1711_D06 Length = 87613 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 tccatcgccgccgccgccggc 276 ||||||||||||||||||||| Sbjct: 72566 tccatcgccgccgccgccggc 72586
>dbj|AK120902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030N23, full insert sequence Length = 1921 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 gtccatcgccgccgccgccggcaac 279 ||||| ||||||||||||||||||| Sbjct: 599 gtccaccgccgccgccgccggcaac 623
>dbj|AK120784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010F14, full insert sequence Length = 641 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 tgtccatcgccgccgccgccg 274 ||||||||||||||||||||| Sbjct: 86 tgtccatcgccgccgccgccg 66
>gb|AF150113.1|AF150113 Oryza sativa small zinc finger-like protein (TIM9) mRNA, complete cds Length = 458 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 tgtccatcgccgccgccgccg 274 ||||||||||||||||||||| Sbjct: 61 tgtccatcgccgccgccgccg 41
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 tcgccgccgccgccggcaacc 280 ||||||||||||||||||||| Sbjct: 4922476 tcgccgccgccgccggcaacc 4922496 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 25867489 gtccatcgccgccgccgccg 25867470 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 8094161 ccatcgccgccgccgccggc 8094180
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 tgtccatcgccgccgccgccg 274 ||||||||||||||||||||| Sbjct: 23478573 tgtccatcgccgccgccgccg 23478553 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 10226634 catcgccgccgccgccggca 10226615 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 4215335 ccatcgccgccgccgccggc 4215316 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 2855154 ccatcgccgccgccgccggc 2855173
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tgtccatcgccgccgccgccg 274 ||||||||||||||||||||| Sbjct: 156028 tgtccatcgccgccgccgccg 156048
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 ccaatccatgcctatggaggg 388 ||||||||||||||||||||| Sbjct: 994764 ccaatccatgcctatggaggg 994784
>ref|XM_550434.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 913 ccatcgccgccgccgccggc 894
>ref|XM_483271.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1131 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 284 tcgccgccgccgccggcaac 265
>ref|XM_508227.1| PREDICTED: Pan troglodytes similar to Nucleosome assembly protein 1-like 4 (Nucleosome assembly protein 2) (NAP2) (LOC450961), mRNA Length = 2979 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 1287 ctcttctccttcttcacctt 1268
>ref|XM_464749.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 528 gtccatcgccgccgccgccg 509
>ref|XM_464486.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1122 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 218 tcgccgccgccgccggcaac 199
>ref|XM_463043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 694 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 97 catcgccgccgccgccggca 116
>ref|NM_190601.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 507 gtccatcgccgccgccgccg 488
>ref|NM_005969.3| Homo sapiens nucleosome assembly protein 1-like 4 (NAP1L4), mRNA Length = 2564 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 1203 ctcttctccttcttcacctt 1184
>ref|NM_192605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 1676 catcgccgccgccgccggca 1695
>ref|NM_193095.1| Oryza sativa (japonica cultivar-group), mRNA Length = 681 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 275 ccatcgccgccgccgccggc 294
>ref|XM_475089.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1647 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 260 ctcttctccttcttcacctt 241
>gb|BT019352.1| Synthetic construct Homo sapiens nucleosome assembly protein 1-like 4 mRNA, partial cds Length = 1128 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 1062 ctcttctccttcttcacctt 1043
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 104950 ccatcgccgccgccgccggc 104969
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcttctccttcttcaccttg 240 |||||||||||||||||||| Sbjct: 31038 tcttctccttcttcaccttg 31057
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 32549 ctcttctccttcttcacctt 32568
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 3964401 ccatcgccgccgccgccggc 3964420
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 609865 catcgccgccgccgccggca 609846
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 90383 tcgccgccgccgccggcaac 90364
>gb|BC022090.2| Homo sapiens nucleosome assembly protein 1-like 4, mRNA (cDNA clone MGC:4565 IMAGE:3029455), complete cds Length = 2455 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 1113 ctcttctccttcttcacctt 1094
>gb|AE009392.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 162 of 187 of the complete sequence Length = 10299 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggcaacccgcc 284 |||||||| ||||| ||||||||||||| Sbjct: 8920 ccatcgccaccgccaccggcaacccgcc 8893
>gb|AE008222.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 26 of 187 of the complete sequence Length = 11690 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggcaacccgcc 284 |||||||| ||||| ||||||||||||| Sbjct: 10527 ccatcgccaccgccaccggcaacccgcc 10554
>ref|XM_705975.1| Candida albicans SC5314 hypothetical protein (CaO19.11199), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttgttct 244 |||||| ||||||||||||||||| Sbjct: 479 tcttcttcttcttcaccttgttct 456
>ref|XM_705961.1| Candida albicans SC5314 hypothetical protein (CaO19.3714), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttgttct 244 |||||| ||||||||||||||||| Sbjct: 479 tcttcttcttcttcaccttgttct 456
>gb|AC140209.2| Mus musculus BAC clone RP24-472D23 from chromosome 15, complete sequence Length = 175802 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tcttctccttcttcaccttgttct 244 ||||||||||||||||||| |||| Sbjct: 56719 tcttctccttcttcaccttcttct 56742
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 155710 gtccatcgccgccgccgccg 155691
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 35076 catcgccgccgccgccggca 35095
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 38866 gtccatcgccgccgccgccg 38847
>ref|XM_754722.1| Ustilago maydis 521 hypothetical protein (UM03668.1) partial mRNA Length = 1095 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacgagcaccacacagccat 45 |||||||||||||||||||| Sbjct: 20 cacgagcaccacacagccat 1
>ref|XM_848889.1| PREDICTED: Canis familiaris similar to ADP-ribosylation factor-like 2 binding protein isoform 1 (LOC611248), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 137 gtccatcgccgccgccgccg 118
>ref|XM_504605.1| Yarrowia lipolytica CLIB122, YALI0E30789g predicted mRNA Length = 2805 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctccttcttcaccttgttct 244 |||||||||||||||||||| Sbjct: 201 ctccttcttcaccttgttct 182
>emb|AL157396.9| Human DNA sequence from clone RP11-437J2 on chromosome 10 Contains the 3' end of the PDE6C gene for phosphodiesterase 6C, cGMP-specific, cone, alpha prime (PDEA2), the C10orf4 gene for chromosome 10 open reading frame 4 and the 5' end of the LGI1 gene for leucine-rich glioma inactivated 1, complete sequence Length = 128796 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 54822 cgccgccgccgcccgcaacccgcc 54845
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 155082 ccatcgccgccgccgccggc 155101
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 164473 ccatcgccgccgccgccggc 164492
>emb|AL645847.15| Mouse DNA sequence from clone RP23-428I5 on chromosome 11 Contains the 3' end of the Trim16 gene for tripartite motif protein 16, the gene for a novel WD domain, G-beta repeat domain containing protein, the gene for the ortholog of human family with sequence similarity 18 member B FAM18B, a novel gene and the 5' end of a novel gene, complete sequence Length = 124933 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttgttct 244 ||||||||||||||||||| |||| Sbjct: 83488 tcttctccttcttcaccttcttct 83465
>emb|CR858562.1| Pongo pygmaeus mRNA; cDNA DKFZp468A247 (from clone DKFZp468A247) Length = 2597 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 1297 ctcttctccttcttcacctt 1278
>emb|AJ431725.1|HSA431725 Homo sapiens mRNA for FRA10AC1 protein, variant 2 Length = 1392 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 33 cgccgccgccgcccgcaacccgcc 10
>emb|AJ431724.1|HSA431724 Homo sapiens mRNA for FRA10AC1 protein, variant 3.1 Length = 1455 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 33 cgccgccgccgcccgcaacccgcc 10
>emb|AJ431723.1|HSA431723 Homo sapiens mRNA for FRA10AC1 protein, variant 3.2 Length = 1464 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 33 cgccgccgccgcccgcaacccgcc 10
>emb|AJ431722.1|HSA431722 Homo sapiens mRNA for FRA10AC1 protein, variant 3.3 Length = 1472 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 33 cgccgccgccgcccgcaacccgcc 10
>emb|AJ431721.1|HSA431721 Homo sapiens mRNA for FRA10AC1 protein, variant 1 Length = 1344 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 33 cgccgccgccgcccgcaacccgcc 10
>gb|AC023697.5| Drosophila melanogaster X BAC RP98-13N3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171751 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tcttctccttcttcaccttgttct 244 ||||||||||||||||||| |||| Sbjct: 47274 tcttctccttcttcacctttttct 47297
>emb|CR625507.1| full-length cDNA clone CL0BB004ZA08 of Neuroblastoma of Homo sapiens (human) Length = 1474 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 52 cgccgccgccgcccgcaacccgcc 29
>emb|CR624939.1| full-length cDNA clone CS0DC013YH21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1662 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 382 ctcttctccttcttcacctt 363
>gb|AE005711.1| Caulobacter crescentus CB15 section 37 of 359 of the complete genome Length = 10738 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 8212 catcgccgccgccgccggca 8231
>emb|CR621041.1| full-length cDNA clone CL0BA004ZA08 of Placenta of Homo sapiens (human) Length = 1571 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 52 cgccgccgccgcccgcaacccgcc 29
>dbj|AK095320.1| Homo sapiens cDNA FLJ38001 fis, clone CTONG2012077 Length = 3453 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 226 ctcttctccttcttcacctt 207
>dbj|AK093928.1| Homo sapiens cDNA FLJ36609 fis, clone TRACH2015939 Length = 2255 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 986 ctcttctccttcttcacctt 967
>dbj|AK090955.1| Homo sapiens cDNA FLJ33636 fis, clone BRAMY2023115, weakly similar to PUTATIVE ACID PHOSPHATASE F26C11.1 (EC 3.1.3.2) Length = 2400 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 37 cgccgccgccgcccgcaacccgcc 14
>gb|AY102658.1| Drosophila melanogaster GH06537 full insert cDNA Length = 2711 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttgttct 244 ||||||||||||||||||| |||| Sbjct: 31 tcttctccttcttcacctttttct 8
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 3322092 ccatcgccgccgccgccggc 3322073
>ref|NM_078589.2| Drosophila melanogaster strawberry notch CG1903-RB, transcript variant B (sno), mRNA Length = 5747 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttgttct 244 ||||||||||||||||||| |||| Sbjct: 3083 tcttctccttcttcacctttttct 3060
>dbj|AK135529.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820444L10 product:PP4519 homolog [Homo sapiens], full insert sequence Length = 2510 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcttctccttcttcaccttg 240 |||||||||||||||||||| Sbjct: 1240 tcttctccttcttcaccttg 1259
>gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p15.5 spanning D11S1 through D11S25, complete sequence Length = 244254 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 130191 ctcttctccttcttcacctt 130210
>dbj|AK008617.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2200002D01 product:weakly similar to HAI-2 RELATED SMALL PROTEIN (IMMORTALIZATION-UPREGULATED PROTEIN 1) (HEPATOCYTE GROWTH FACTOR ACTIVATOR INHIBITOR TYPE 2-RELATED SMALL PEPTIDE) (SIMILAR TO IMMORTALIZATION-UPREGULATED PROTEIN) [Homo sapiens], full insert sequence Length = 428 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttg 240 |||||||||||||||||||| Sbjct: 335 tcttctccttcttcaccttg 316
>gb|AY942202.1| Poa alpina microsatellite GAC1 sequence Length = 626 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 tggcttctcggtgccgctaccgct 221 |||||| ||||||||||||||||| Sbjct: 127 tggcttgtcggtgccgctaccgct 150
>dbj|AK033738.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130604L22 product:weakly similar to HAI-2 RELATED SMALL PROTEIN (IMMORTALIZATION-UPREGULATED PROTEIN 1) (HEPATOCYTE GROWTH FACTOR ACTIVATOR INHIBITOR TYPE 2-RELATED SMALL PEPTIDE) (SIMILAR TO IMMORTALIZATION-UPREGULATED PROTEIN) [Homo sapiens], full insert sequence Length = 1392 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttg 240 |||||||||||||||||||| Sbjct: 294 tcttctccttcttcaccttg 275
>gb|BC086934.1| Mus musculus RIKEN cDNA 2200002D01 gene, mRNA (cDNA clone IMAGE:6749587) Length = 448 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttg 240 |||||||||||||||||||| Sbjct: 295 tcttctccttcttcaccttg 276
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 25195123 tcgccgccgccgccggcaac 25195142
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 26165091 ccatcgccgccgccgccggc 26165072
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 760107 ctcttctccttcttcacctt 760126
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 36415939 gtccatcgccgccgccgccg 36415958 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 23283083 catcgccgccgccgccggca 23283102 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 22672246 gtccatcgccgccgccgccg 22672227 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 8758491 gtccatcgccgccgccgccg 8758472 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 4566766 ccatcgccgccgccgccggc 4566747
>gb|AC023826.6| Homo sapiens chromosome 16 clone RP11-380E14, complete sequence Length = 196755 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 cagccggccagggtcagcagggag 118 ||||||||||||||| |||||||| Sbjct: 15777 cagccggccagggtctgcagggag 15754
>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 cagccggccagggtcagcagggag 118 ||||||||||||||| |||||||| Sbjct: 59401 cagccggccagggtctgcagggag 59424
>gb|AF515794.1| Mus musculus HAI-2 related small peptide (H2rsp) gene, complete cds Length = 2162 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttg 240 |||||||||||||||||||| Sbjct: 2028 tcttctccttcttcaccttg 2009
>gb|AC019051.8| Homo sapiens BAC clone RP11-92L24 from 2, complete sequence Length = 137248 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gccaattgaatcaagagaaa 137 |||||||||||||||||||| Sbjct: 81702 gccaattgaatcaagagaaa 81683
>gb|AE004660.1| Pseudomonas aeruginosa PAO1, section 221 of 529 of the complete genome Length = 10977 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaacccgc 283 ||||||||||||||||| |||||| Sbjct: 7733 tcgccgccgccgccggcgacccgc 7710
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 67778 gtccatcgccgccgccgccg 67797
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 75948 gtccatcgccgccgccgccg 75929
>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence Length = 176226 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 145471 ctcttctccttcttcacctt 145452
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 100509 gtccatcgccgccgccgccg 100490
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 115286 gtccatcgccgccgccgccg 115305
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 8697438 tcgccgccgccgccggcaac 8697419
>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 101453 ccatcgccgccgccgccggc 101434
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0610D01 Length = 146418 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 102601 ccatcgccgccgccgccggc 102582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 66553 ctcttctccttcttcacctt 66534
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 67005 ccatcgccgccgccgccggc 66986 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 30957 ctcttctccttcttcacctt 30938
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 48958 gtccatcgccgccgccgccg 48939
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 8781 catcgccgccgccgccggca 8800
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 69825 catcgccgccgccgccggca 69844
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 155242 gtccatcgccgccgccgccg 155223
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 108496 gtccatcgccgccgccgccg 108477
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgccgccgccgccggcaacc 280 |||||||||||||||||||| Sbjct: 3647 cgccgccgccgccggcaacc 3666
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgccgccgccgccggcaacc 280 |||||||||||||||||||| Sbjct: 79882 cgccgccgccgccggcaacc 79901
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 37398 tcgccgccgccgccggcaac 37379
>dbj|AB124586.1| Pan troglodytes RBP4 gene for retinol binding protein4, complete cds Length = 173042 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 9304 cgccgccgccgcccgcaacccgcc 9281
>gb|AY891170.1| Synthetic construct Homo sapiens clone FLH008707.01L nucleosome assembly protein 1-like 4 (NAP1L4) mRNA, partial cds Length = 1128 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 1062 ctcttctccttcttcacctt 1043
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 60246 tcgccgccgccgccggcaac 60265
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0064I19 Length = 111644 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tcgccgccgccgccggcaac 279 |||||||||||||||||||| Sbjct: 99298 tcgccgccgccgccggcaac 99317
>ref|XM_319665.2| Anopheles gambiae str. PEST ENSANGP00000022005 (ENSANGG00000019516), partial mRNA Length = 3717 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttg 240 |||||||||||||||||||| Sbjct: 3709 tcttctccttcttcaccttg 3690
>dbj|AK109849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F06, full insert sequence Length = 2145 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 528 gtccatcgccgccgccgccg 509
>dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A04, full insert sequence Length = 1985 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 1735 catcgccgccgccgccggca 1754
>dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D06, full insert sequence Length = 2042 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 1677 catcgccgccgccgccggca 1696
>dbj|AK102520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095O09, full insert sequence Length = 687 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 55 ccatcgccgccgccgccggc 36
>dbj|AK073643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033053O06, full insert sequence Length = 1191 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 106 gtccatcgccgccgccgccg 87
>dbj|AK071104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078D20, full insert sequence Length = 1961 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgccgccgccgccggcaacc 280 |||||||||||||||||||| Sbjct: 712 cgccgccgccgccggcaacc 731
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gccggccagggtcagcaggg 116 |||||||||||||||||||| Sbjct: 4872868 gccggccagggtcagcaggg 4872887
>dbj|AK064843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G07, full insert sequence Length = 1694 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 110 ccatcgccgccgccgccggc 91
>dbj|AK059798.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F01, full insert sequence Length = 1196 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gtccatcgccgccgccgccg 274 |||||||||||||||||||| Sbjct: 187 gtccatcgccgccgccgccg 168
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 56949 ccatcgccgccgccgccggc 56930
>ref|NM_145246.3| Homo sapiens chromosome 10 open reading frame 4 (C10orf4), transcript variant FRA10AC1-1, mRNA Length = 2400 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 37 cgccgccgccgcccgcaacccgcc 14
>ref|NM_203441.2| Homo sapiens chromosome 10 open reading frame 4 (C10orf4), transcript variant FRA10AC1-2, mRNA Length = 2448 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 37 cgccgccgccgcccgcaacccgcc 14
>ref|NM_203438.2| Homo sapiens chromosome 10 open reading frame 4 (C10orf4), transcript variant FRA10AC1-3.3, mRNA Length = 2528 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 37 cgccgccgccgcccgcaacccgcc 14
>ref|NM_203439.2| Homo sapiens chromosome 10 open reading frame 4 (C10orf4), transcript variant FRA10AC1-3.2, mRNA Length = 2520 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 37 cgccgccgccgcccgcaacccgcc 14
>ref|NM_203440.2| Homo sapiens chromosome 10 open reading frame 4 (C10orf4), transcript variant FRA10AC1-3.1, mRNA Length = 2511 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgccgccgccgccggcaacccgcc 284 ||||||||||||| |||||||||| Sbjct: 37 cgccgccgccgcccgcaacccgcc 14
>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete sequence Length = 332030 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tcttctccttcttcaccttgttct 244 ||||||||||||||||||| |||| Sbjct: 271880 tcttctccttcttcacctttttct 271903
>gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, complete sequence Length = 228289 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tcttctccttcttcaccttgttct 244 ||||||||||||||||||| |||| Sbjct: 225665 tcttctccttcttcaccttcttct 225688
>gb|U77456.1|HSU77456 Human nucleosome assembly protein 2 mRNA, complete cds Length = 2534 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 1211 ctcttctccttcttcacctt 1192
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 68435 ccatcgccgccgccgccggc 68454
>emb|BX813303.2|CNS0B0PK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0089G08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 13001 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 12407 catcgccgccgccgccggca 12426
>emb|AL732643.6|CNS08C9I Oryza sativa chromosome 12, . BAC OSJNBa0094N04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92382 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 catcgccgccgccgccggca 277 |||||||||||||||||||| Sbjct: 90954 catcgccgccgccgccggca 90935
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 15237 ccatcgccgccgccgccggc 15218
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctccttcttcaccttgttct 244 |||||||||||||||||||| Sbjct: 3620045 ctccttcttcaccttgttct 3620026
>gb|U95760.1|DMU95760 Drosophila melanogaster strawberry notch (sno) mRNA, complete cds Length = 5756 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttgttct 244 ||||||||||||||||||| |||| Sbjct: 3083 tcttctccttcttcacctttttct 3060
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cagccggccagggtcagcag 114 |||||||||||||||||||| Sbjct: 61770 cagccggccagggtcagcag 61751
>gb|AC164564.3| Mus musculus BAC clone RP23-96N11 from chromosome 7, complete sequence Length = 247415 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcttctccttcttcaccttg 240 |||||||||||||||||||| Sbjct: 10857 tcttctccttcttcaccttg 10838
>gb|U51281.1|HSU51281 Human chromosome 11 cosmid cSRL-87f11 Length = 37972 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 32773 ctcttctccttcttcacctt 32754
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tccatcgccgccgccgccgg 275 |||||||||||||||||||| Sbjct: 13598 tccatcgccgccgccgccgg 13579
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ctcttctccttcttcacctt 239 |||||||||||||||||||| Sbjct: 105288 ctcttctccttcttcacctt 105307
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ccatcgccgccgccgccggc 276 |||||||||||||||||||| Sbjct: 61493 ccatcgccgccgccgccggc 61512 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,480,080 Number of Sequences: 3902068 Number of extensions: 4480080 Number of successful extensions: 257819 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 242728 Number of HSP's gapped (non-prelim): 15082 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
