>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 49       tcctccgtcgccgccgccactcc 71
                |||||||||||||||||||||||
Sbjct: 30944131 tcctccgtcgccgccgccactcc 30944109



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 55       gtcgccgccgccactccctc 74
                ||||||||||||||||||||
Sbjct: 13122182 gtcgccgccgccactccctc 13122201

>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
              genomic sequence, complete sequence
          Length = 168759

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 49     tcctccgtcgccgccgccactcc 71
              |||||||||||||||||||||||
Sbjct: 151933 tcctccgtcgccgccgccactcc 151955

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 49       tcctccgtcgccgccgccactcc 71
                |||||||||||||||||||||||
Sbjct: 31034654 tcctccgtcgccgccgccactcc 31034632



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 55       gtcgccgccgccactccctc 74
                ||||||||||||||||||||
Sbjct: 13118957 gtcgccgccgccactccctc 13118976

>ref|NM_188680.1| Oryza sativa (japonica cultivar-group), Ozsa8283 predicted mRNA
          Length = 1755

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 49  tcctccgtcgccgccgccactccct 73
           ||||||| |||||||||||||||||
Sbjct: 399 tcctccgccgccgccgccactccct 375

>gb|AC105320.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1675_H07,
             complete sequence
          Length = 135294

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    ctccttcctccgtcgccgccg 64
             |||||||||||||||||||||
Sbjct: 24970 ctccttcctccgtcgccgccg 24950

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 44       ctccttcctccgtcgccgccg 64
                |||||||||||||||||||||
Sbjct: 15321013 ctccttcctccgtcgccgccg 15320993

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 54       cgtcgccgccgccactccctc 74
                |||||||||||||||||||||
Sbjct: 14789912 cgtcgccgccgccactccctc 14789892



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 49      tcctccgtcgccgccgccactccct 73
               ||||||| |||||||||||||||||
Sbjct: 7595337 tcctccgccgccgccgccactccct 7595361



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 46       ccttcctccgtcgccgccgc 65
                ||||||||||||||||||||
Sbjct: 24422297 ccttcctccgtcgccgccgc 24422316

>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0086P08
          Length = 145312

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 49   tcctccgtcgccgccgccactccct 73
            ||||||| |||||||||||||||||
Sbjct: 5913 tcctccgccgccgccgccactccct 5937

>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0708G02
          Length = 168976

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 49     tcctccgtcgccgccgccactccct 73
              ||||||| |||||||||||||||||
Sbjct: 144129 tcctccgccgccgccgccactccct 144153

>dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503E05
          Length = 168258

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    cgtcgccgccgccactccctc 74
             |||||||||||||||||||||
Sbjct: 25956 cgtcgccgccgccactccctc 25936

>emb|AJ278907.1|BTA278907 Bos taurus partial ed1 gene for ectodysplasin A, exons 4-9
          Length = 37331

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    ctccctctggtctccaccacc 88
             |||||||||||||||||||||
Sbjct: 23895 ctccctctggtctccaccacc 23915

>gb|AC125349.3| Mus musculus BAC clone RP23-394P9 from chromosome 3, complete sequence
          Length = 194060

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    atccaaggatgggaaagctg 338
              ||||||||||||||||||||
Sbjct: 185209 atccaaggatgggaaagctg 185228

>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
              from chromosome 3, complete sequence
          Length = 151173

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     gtcgccgccgccactccctc 74
              ||||||||||||||||||||
Sbjct: 104456 gtcgccgccgccactccctc 104437

>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     tctccaccaccgccgctcgccgcc 101
              |||||||||||||||| |||||||
Sbjct: 115869 tctccaccaccgccgcacgccgcc 115846

>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent
             ansamitocin biosynthetic gene cluster I, partial sequence
          Length = 82746

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   cactcggcgacgtcgccgcc 168
             ||||||||||||||||||||
Sbjct: 20405 cactcggcgacgtcgccgcc 20386

>emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in linkage group 2,
             complete sequence
          Length = 167067

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   ggcgctgaaggctgaagaac 401
             ||||||||||||||||||||
Sbjct: 43431 ggcgctgaaggctgaagaac 43412

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     gttgccgccgcggccgagat 189
               ||||||||||||||||||||
Sbjct: 2237631 gttgccgccgcggccgagat 2237650

>dbj|AK168666.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
            library, clone:I920042O21 product:phosphatidylinositol
            glycan, class K, full insert sequence
          Length = 2299

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 319  atccaaggatgggaaagctg 338
            ||||||||||||||||||||
Sbjct: 1873 atccaaggatgggaaagctg 1892

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 78       tctccaccaccgccgctcgccgcc 101
                |||||||||||||||| |||||||
Sbjct: 30848348 tctccaccaccgccgcacgccgcc 30848325

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 48       ttcctccgtcgccgccgcca 67
                ||||||||||||||||||||
Sbjct: 26620827 ttcctccgtcgccgccgcca 26620846

>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0686E09
          Length = 156425

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   ccttcctccgtcgccgccgc 65
            ||||||||||||||||||||
Sbjct: 2681 ccttcctccgtcgccgccgc 2700

>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0460H04
          Length = 166490

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     ttcctccgtcgccgccgcca 67
              ||||||||||||||||||||
Sbjct: 154480 ttcctccgtcgccgccgcca 154499

>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0677B10
          Length = 134423

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    ttcctccgtcgccgccgcca 67
             ||||||||||||||||||||
Sbjct: 37257 ttcctccgtcgccgccgcca 37276

>emb|X74068.1|RSPLAS Rhizobium sp. symbiotic plasmid DNA
          Length = 2858

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   tcctccgtcgccgccgccac 68
            ||||||||||||||||||||
Sbjct: 1322 tcctccgtcgccgccgccac 1303

>dbj|AK104848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H10,
          full insert sequence
          Length = 1832

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 46 ccttcctccgtcgccgccgc 65
          ||||||||||||||||||||
Sbjct: 22 ccttcctccgtcgccgccgc 41

>dbj|AK071348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092D06,
          full insert sequence
          Length = 1910

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 46 ccttcctccgtcgccgccgc 65
          ||||||||||||||||||||
Sbjct: 46 ccttcctccgtcgccgccgc 65

>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 78    tctccaccaccgccgctcgccgcc 101
             |||||||||||||||| |||||||
Sbjct: 29218 tctccaccaccgccgcacgccgcc 29195

>gb|AC111047.10| Mus musculus chromosome 3, clone RP23-176H24, complete sequence
          Length = 205473

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    atccaaggatgggaaagctg 338
              ||||||||||||||||||||
Sbjct: 169246 atccaaggatgggaaagctg 169227

>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence
          Length = 536165

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     tcctccgtcgccgccgccac 68
              ||||||||||||||||||||
Sbjct: 165710 tcctccgtcgccgccgccac 165691


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,453,663
Number of Sequences: 3902068
Number of extensions: 3453663
Number of successful extensions: 92707
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91341
Number of HSP's gapped (non-prelim): 1366
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)