ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl22c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120378.1| Oryza sativa (japonica cultivar-group) cDNA clon... 398 e-108
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
3dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 145 1e-31
5gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
7ref|NM_187699.1| Oryza sativa (japonica cultivar-group), predic... 143 5e-31
8gb|AC140104.22| Medicago truncatula clone mth2-10g22, complete s... 56 9e-05
9gb|AC142395.41| Medicago truncatula clone mth2-18g1, complete se... 56 9e-05
10gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.35
11gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.35
12emb|CR555306.1| Azoarcus sp. EbN1 complete genome 44 0.35
13emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.35
14dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.35
15ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 ... 42 1.4
16gb|AC102291.7| Mus musculus chromosome 15, clone RP24-366F6, com... 42 1.4
17gb|U15422.1|HSU15422 Homo sapiens protamine 1 (PRM1), protamine ... 42 1.4
18gb|AF157706.1| Human herpesvirus 6B strain Z29, complete genome 42 1.4
19gb|AC163333.6| Mus musculus chromosome 1, clone RP24-98O21, comp... 42 1.4
20gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.4
21gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.4
22emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.4
23gb|AC009121.8| Homo sapiens chromosome 16 clone RP11-485G7, comp... 42 1.4
24gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.4
25gb|AC093538.2| Homo sapiens chromosome 5 clone RP11-99I23, compl... 42 1.4
26gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.4
27dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
28dbj|AB021506.1| Human herpesvirus 6B DNA, complete genome, strai... 42 1.4
29ref|XM_320795.2| Anopheles gambiae str. PEST ENSANGP00000008896 ... 42 1.4
30gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 ... 42 1.4
31gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.4
32gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.4
33gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, comp... 42 1.4
34gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 5.4
35ref|NM_001005249.1| Canis familiaris T-box 2 (TBX2), mRNA 40 5.4
36gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 5.4
37ref|NM_005994.3| Homo sapiens T-box 2 (TBX2), mRNA 40 5.4
38ref|NM_188153.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
39ref|XM_423571.1| PREDICTED: Gallus gallus similar to Translation... 40 5.4
40ref|XM_616100.2| PREDICTED: Bos taurus similar to T-box 2 (LOC53... 40 5.4
41gb|BC052566.1| Homo sapiens T-box 2, mRNA (cDNA clone MGC:59687 ... 40 5.4
42gb|AC099631.6| Mus musculus chromosome 1, clone RP24-93F22, comp... 40 5.4
43gb|AF421216.1| Streptomyces clavuligerus adenine phosphoribosylt... 40 5.4
44gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.4
45emb|AL359253.17| Human DNA sequence from clone RP11-428L19 on ch... 40 5.4
46emb|AL772233.6| Mouse DNA sequence from clone RP23-432I13 on chr... 40 5.4
47gb|BC070054.1| Homo sapiens T-box 2, mRNA (cDNA clone IMAGE:3034... 40 5.4
48emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ... 40 5.4
49emb|AL772409.4| Mouse DNA sequence from clone RP23-323L8 on chro... 40 5.4
50emb|AL596324.7| Mouse DNA sequence from clone RP23-324M14 on chr... 40 5.4
51emb|CR860914.1| Pongo pygmaeus mRNA; cDNA DKFZp469O1931 (from cl... 40 5.4
52emb|CR857331.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1932 (from cl... 40 5.4
53emb|AL832900.1|HSM804211 Homo sapiens mRNA; cDNA DKFZp762H2012 (... 40 5.4
54gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, co... 40 5.4
55gb|AE012390.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 5.4
56ref|NM_009324.1| Mus musculus T-box 2 (Tbx2), mRNA 40 5.4
57dbj|AK149348.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 5.4
58gb|U28049.1|HSU28049 Human TBX2 (TXB2) mRNA, complete cds 40 5.4
59emb|BX321896.13| Zebrafish DNA sequence from clone RP71-49B22 in... 40 5.4
60gb|AY192798.1|AH012457S1 Canis familiaris T-box 2 transcription ... 40 5.4
61gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 5.4
62gb|AC025962.5|AC025962 Homo sapiens chromosome 8, clone RP11-790... 40 5.4
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
64gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Can... 40 5.4
65gb|AC011236.8| Homo sapiens BAC clone RP11-312D1 from 2, complet... 40 5.4
66dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
67emb|BX929929.1| Gallus gallus finished cDNA, clone ChEST296d2 40 5.4
68ref|XM_220810.3| PREDICTED: Rattus norvegicus T-box 2 (predicted... 40 5.4
69gb|AF244917.1|AF244917 Mus musculus T-box 2 (Tbx2) gene, complet... 40 5.4
70dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.4
71emb|AJ339419.1|HSA339419 Homo sapiens genomic sequence surroundi... 40 5.4
72emb|AJ339418.1|HSA339418 Homo sapiens genomic sequence surroundi... 40 5.4
73emb|AJ339370.1|HSA339370 Homo sapiens genomic sequence surroundi... 40 5.4
74emb|AJ339003.1|HSA339003 Homo sapiens genomic sequence surroundi... 40 5.4
75emb|AJ334959.1|HSA334959 Homo sapiens genomic sequence surroundi... 40 5.4
76emb|AJ334803.1|HSA334803 Homo sapiens genomic sequence surroundi... 40 5.4
77emb|AJ341965.1|HSA341965 Homo sapiens genomic sequence surroundi... 40 5.4
78gb|U23409.1|TAU23409 Triticum aestivum p34cdc2 (cdc2TaA) mRNA, c... 40 5.4
79gb|AC005746.1|AC005746 Homo sapiens chromosome 17, clone hRPK.33... 40 5.4
80gb|U15566.1|MMU15566 Mus musculus Tbx2 mRNA, complete cds 40 5.4
81gb|AC132376.4| Mus musculus BAC clone RP24-80J23 from 1, complet... 40 5.4
82dbj|AB209378.1| Homo sapiens mRNA for T-box 2 variant protein 40 5.4
83emb|AJ342204.1|HSA342204 Homo sapiens genomic sequence surroundi... 40 5.4
84dbj|AP003697.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.4 
>dbj|AK120378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072A10, full
           insert sequence
          Length = 4831

 Score =  398 bits (201), Expect = e-108
 Identities = 261/281 (92%)
 Strand = Plus / Plus

                                                                       
Query: 124 gatggcgtgggcggaggacgaggccattggccccgacgtcgcctcggcggggctgcacgt 183
           |||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||
Sbjct: 301 gatggcttgggcggaggacgaggcgattggccccgacgtggcctccgcggggctccacgt 360

                                                                       
Query: 184 ctcggagcggatcggccgcgacgccgccgcgcagcccgacctggaggaggcgctcgaggc 243
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 361 ctcggagcggatcggccgcgacgccgccgctcagcccgacctggaggaggccctcgaggc 420

                                                                       
Query: 244 ctcgcgctacgcctcccacccttactcctcgcaccccaaggagtggcctcctctggtgga 303
           |||||||||||||||||| || ||||||||||| |||||||||||||||||| |||||||
Sbjct: 421 ctcgcgctacgcctcccatccctactcctcgcatcccaaggagtggcctcctttggtgga 480

                                                                       
Query: 304 agttgcagaaactcggcagcttcctcctatgctgattgagagatataatgcagctgctgg 363
           ||| ||||||||| ||||| | |||||||||||| |||| ||||||||||| ||||||||
Sbjct: 481 agtagcagaaactaggcagttacctcctatgctggttgaaagatataatgccgctgctgg 540

                                                    
Query: 364 tgaaggaacagcactttgtggaatattttctgaaatacacc 404
           |||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 541 tgaaggaacagctctttgtggaatattttctgaagtacacc 581
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  244 bits (123), Expect = 2e-61
 Identities = 153/163 (93%)
 Strand = Plus / Plus

                                                                            
Query: 124      gatggcgtgggcggaggacgaggccattggccccgacgtcgcctcggcggggctgcacgt 183
                |||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||
Sbjct: 11358463 gatggcttgggcggaggacgaggcgattggccccgacgtggcctccgcggggctccacgt 11358522

                                                                            
Query: 184      ctcggagcggatcggccgcgacgccgccgcgcagcccgacctggaggaggcgctcgaggc 243
                |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 11358523 ctcggagcggatcggccgcgacgccgccgctcagcccgacctggaggaggccctcgaggc 11358582

                                                           
Query: 244      ctcgcgctacgcctcccacccttactcctcgcaccccaaggag 286
                |||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 11358583 ctcgcgctacgcctcccatccctactcctcgcatcccaaggag 11358625



 Score =  159 bits (80), Expect = 8e-36
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                            
Query: 285      agtggcctcctctggtggaagttgcagaaactcggcagcttcctcctatgctgattgaga 344
                ||||||||||| |||||||||| ||||||||| ||||| | |||||||||||| |||| |
Sbjct: 11360601 agtggcctcctttggtggaagtagcagaaactaggcagttacctcctatgctggttgaaa 11360660

                                                                            
Query: 345      gatataatgcagctgctggtgaaggaacagcactttgtggaatattttctgaaatacacc 404
                |||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 11360661 gatataatgccgctgctggtgaaggaacagctctttgtggaatattttctgaagtacacc 11360720
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>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1386G10
          Length = 121827

 Score =  244 bits (123), Expect = 2e-61
 Identities = 153/163 (93%)
 Strand = Plus / Plus

                                                                         
Query: 124   gatggcgtgggcggaggacgaggccattggccccgacgtcgcctcggcggggctgcacgt 183
             |||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||
Sbjct: 46172 gatggcttgggcggaggacgaggcgattggccccgacgtggcctccgcggggctccacgt 46231

                                                                         
Query: 184   ctcggagcggatcggccgcgacgccgccgcgcagcccgacctggaggaggcgctcgaggc 243
             |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 46232 ctcggagcggatcggccgcgacgccgccgctcagcccgacctggaggaggccctcgaggc 46291

                                                        
Query: 244   ctcgcgctacgcctcccacccttactcctcgcaccccaaggag 286
             |||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 46292 ctcgcgctacgcctcccatccctactcctcgcatcccaaggag 46334



 Score =  159 bits (80), Expect = 8e-36
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                         
Query: 285   agtggcctcctctggtggaagttgcagaaactcggcagcttcctcctatgctgattgaga 344
             ||||||||||| |||||||||| ||||||||| ||||| | |||||||||||| |||| |
Sbjct: 48310 agtggcctcctttggtggaagtagcagaaactaggcagttacctcctatgctggttgaaa 48369

                                                                         
Query: 345   gatataatgcagctgctggtgaaggaacagcactttgtggaatattttctgaaatacacc 404
             |||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 48370 gatataatgccgctgctggtgaaggaacagctctttgtggaatattttctgaagtacacc 48429
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  145 bits (73), Expect = 1e-31
 Identities = 119/133 (89%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                           
Query: 124     gatggcgtgggcggaggacgaggccattggccccgacgtcgcctcggcggggctgcacgt 183
               |||||| ||| ||||||||||||| ||||||||||| || |||||  ||||||| |||||
Sbjct: 6448704 gatggcttggacggaggacgaggcgattggccccgatgtggcctccacggggctccacgt 6448763

                                                                           
Query: 184     ctcggagcggatcggccgcgacgccgccgcgcagcccgacctggagg-aggcgctcgagg 242
               |||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||
Sbjct: 6448764 ctcggagcggatcggccgcgacgccgccgctcagcctgacctggaggaaggccctcgagg 6448823

                            
Query: 243     cctcgcgctacgc 255
               |||| ||| ||||
Sbjct: 6448824 cctcacgccacgc 6448836
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>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
              complete sequence
          Length = 146568

 Score =  145 bits (73), Expect = 1e-31
 Identities = 119/133 (89%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                          
Query: 124    gatggcgtgggcggaggacgaggccattggccccgacgtcgcctcggcggggctgcacgt 183
              |||||| ||| ||||||||||||| ||||||||||| || |||||  ||||||| |||||
Sbjct: 128830 gatggcttggacggaggacgaggcgattggccccgatgtggcctccacggggctccacgt 128889

                                                                          
Query: 184    ctcggagcggatcggccgcgacgccgccgcgcagcccgacctggagg-aggcgctcgagg 242
              |||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||
Sbjct: 128890 ctcggagcggatcggccgcgacgccgccgctcagcctgacctggaggaaggccctcgagg 128949

                           
Query: 243    cctcgcgctacgc 255
              |||| ||| ||||
Sbjct: 128950 cctcacgccacgc 128962
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  145 bits (73), Expect = 1e-31
 Identities = 119/133 (89%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                           
Query: 124     gatggcgtgggcggaggacgaggccattggccccgacgtcgcctcggcggggctgcacgt 183
               |||||| ||| ||||||||||||| ||||||||||| || |||||  ||||||| |||||
Sbjct: 6447917 gatggcttggacggaggacgaggcgattggccccgatgtggcctccacggggctccacgt 6447976

                                                                           
Query: 184     ctcggagcggatcggccgcgacgccgccgcgcagcccgacctggagg-aggcgctcgagg 242
               |||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||
Sbjct: 6447977 ctcggagcggatcggccgcgacgccgccgctcagcctgacctggaggaaggccctcgagg 6448036

                            
Query: 243     cctcgcgctacgc 255
               |||| ||| ||||
Sbjct: 6448037 cctcacgccacgc 6448049
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>ref|NM_187699.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1812

 Score =  143 bits (72), Expect = 5e-31
 Identities = 118/132 (89%), Gaps = 1/132 (0%)
 Strand = Plus / Plus

                                                                       
Query: 125 atggcgtgggcggaggacgaggccattggccccgacgtcgcctcggcggggctgcacgtc 184
           ||||| ||| ||||||||||||| ||||||||||| || |||||  ||||||| ||||||
Sbjct: 1   atggcttggacggaggacgaggcgattggccccgatgtggcctccacggggctccacgtc 60

                                                                       
Query: 185 tcggagcggatcggccgcgacgccgccgcgcagcccgacctggagg-aggcgctcgaggc 243
           ||||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||||||
Sbjct: 61  tcggagcggatcggccgcgacgccgccgctcagcctgacctggaggaaggccctcgaggc 120

                       
Query: 244 ctcgcgctacgc 255
           ||| ||| ||||
Sbjct: 121 ctcacgccacgc 132
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>gb|AC140104.22| Medicago truncatula clone mth2-10g22, complete sequence
          Length = 127043

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 338    attgagagatataatgcagctgctggtgaaggaacagcactttgtggaatattttctgaa 397
              ||||| ||||| ||||| |||| ||| |||||||| ||  |||||||||||||| |||||
Sbjct: 118842 attgaaagatacaatgcggctggtggggaaggaactgctttttgtggaatatttcctgaa 118901

                  
Query: 398    atac 401
              ||||
Sbjct: 118902 atac 118905
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>gb|AC142395.41| Medicago truncatula clone mth2-18g1, complete sequence
          Length = 110556

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 338   attgagagatataatgcagctgctggtgaaggaacagcactttgtggaatattttctgaa 397
             ||||| ||||| ||||| |||| ||| |||||||| ||  |||||||||||||| |||||
Sbjct: 78370 attgaaagatacaatgcggctggtggggaaggaactgctttttgtggaatatttcctgaa 78429

                 
Query: 398   atac 401
             ||||
Sbjct: 78430 atac 78433
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 194     atcggccgcgacgccgccgcgc 215
               ||||||||||||||||||||||
Sbjct: 1055180 atcggccgcgacgccgccgcgc 1055201
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 194     atcggccgcgacgccgccgcgc 215
               ||||||||||||||||||||||
Sbjct: 2510596 atcggccgcgacgccgccgcgc 2510575
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 197     ggccgcgacgccgccgcgcagc 218
               ||||||||||||||||||||||
Sbjct: 3344291 ggccgcgacgccgccgcgcagc 3344270
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 194     atcggccgcgacgccgccgcgc 215
               ||||||||||||||||||||||
Sbjct: 1872066 atcggccgcgacgccgccgcgc 1872087
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 194     atcggccgcgacgccgccgcgc 215
               ||||||||||||||||||||||
Sbjct: 8528256 atcggccgcgacgccgccgcgc 8528235
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>ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 transcript variant
            AT1G13220.2 mRNA, complete cds
          Length = 3600

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 348  ataatgcagctgctggtgaag 368
            |||||||||||||||||||||
Sbjct: 3044 ataatgcagctgctggtgaag 3064
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>gb|AC102291.7| Mus musculus chromosome 15, clone RP24-366F6, complete sequence
          Length = 143783

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 376   actttgtggaatattttctga 396
             |||||||||||||||||||||
Sbjct: 75889 actttgtggaatattttctga 75909
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>gb|U15422.1|HSU15422 Homo sapiens protamine 1 (PRM1), protamine 2 (PRM2), and transition
            protein 2 (TNP2) genes, complete cds
          Length = 40573

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    ccaaaccccaactaaaccaaa 21
            |||||||||||||||||||||
Sbjct: 3147 ccaaaccccaactaaaccaaa 3167
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>gb|AF157706.1| Human herpesvirus 6B strain Z29, complete genome
          Length = 162114

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 196    cggccgcgacgccgccgcgcagcccgacc 224
              ||||||||||| |||||||||| ||||||
Sbjct: 155329 cggccgcgacgtcgccgcgcagaccgacc 155357



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 196  cggccgcgacgccgccgcgcagcccgacc 224
            ||||||||||| |||||||||| ||||||
Sbjct: 2008 cggccgcgacgtcgccgcgcagaccgacc 2036
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>gb|AC163333.6| Mus musculus chromosome 1, clone RP24-98O21, complete sequence
          Length = 128643

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 376   actttgtggaatattttctgaaata 400
             |||||||||||||||| ||||||||
Sbjct: 30308 actttgtggaatatttcctgaaata 30284
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 195     tcggccgcgacgccgccgcgc 215
               |||||||||||||||||||||
Sbjct: 2210299 tcggccgcgacgccgccgcgc 2210319
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 223     cctggaggaggcgctcgaggcctcg 247
               |||||||||||||||||| ||||||
Sbjct: 4802791 cctggaggaggcgctcgacgcctcg 4802815
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    tcggccgcgacgccgccgcgc 215
              |||||||||||||||||||||
Sbjct: 371877 tcggccgcgacgccgccgcgc 371897
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>gb|AC009121.8| Homo sapiens chromosome 16 clone RP11-485G7, complete sequence
          Length = 131487

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     ccaaaccccaactaaaccaaa 21
             |||||||||||||||||||||
Sbjct: 70864 ccaaaccccaactaaaccaaa 70884
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 197     ggccgcgacgccgccgcgcag 217
               |||||||||||||||||||||
Sbjct: 1296493 ggccgcgacgccgccgcgcag 1296513
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>gb|AC093538.2| Homo sapiens chromosome 5 clone RP11-99I23, complete sequence
          Length = 200500

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 354    cagctgctggtgaaggaacagcact 378
              ||||||||||||||||| |||||||
Sbjct: 159786 cagctgctggtgaaggatcagcact 159762
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 195     tcggccgcgacgccgccgcgc 215
               |||||||||||||||||||||
Sbjct: 1616430 tcggccgcgacgccgccgcgc 1616410
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 154     ccccgacgtcgcctcggcggg 174
               |||||||||||||||||||||
Sbjct: 5730533 ccccgacgtcgcctcggcggg 5730553



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     cggccgcgacgccgccgcgc 215
               ||||||||||||||||||||
Sbjct: 1359005 cggccgcgacgccgccgcgc 1358986



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 196     cggccgcgacgccgccgcgc 215
               ||||||||||||||||||||
Sbjct: 1023466 cggccgcgacgccgccgcgc 1023485
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>dbj|AB021506.1| Human herpesvirus 6B DNA, complete genome, strain: HST
          Length = 161573

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 196    cggccgcgacgccgccgcgcagcccgacc 224
              ||||||||||| |||||||||| ||||||
Sbjct: 155042 cggccgcgacgtcgccgcgcagaccgacc 155070



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 196  cggccgcgacgccgccgcgcagcccgacc 224
            ||||||||||| |||||||||| ||||||
Sbjct: 2000 cggccgcgacgtcgccgcgcagaccgacc 2028
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>ref|XM_320795.2| Anopheles gambiae str. PEST ENSANGP00000008896
           (ENSANGG00000006700), partial mRNA
          Length = 2932

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 222 acctggaggaggcgctcgagg 242
           |||||||||||||||||||||
Sbjct: 476 acctggaggaggcgctcgagg 496
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>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence
          Length = 99758

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 348   ataatgcagctgctggtgaag 368
             |||||||||||||||||||||
Sbjct: 92417 ataatgcagctgctggtgaag 92437
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 195     tcggccgcgacgccgccgcgc 215
               |||||||||||||||||||||
Sbjct: 2607253 tcggccgcgacgccgccgcgc 2607233
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 198     gccgcgacgccgccgcgcagcccga 222
               ||||||||||||||| |||||||||
Sbjct: 2637390 gccgcgacgccgccgagcagcccga 2637366
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>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence
          Length = 171278

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 376   actttgtggaatattttctgaaata 400
             |||||||||||||||| ||||||||
Sbjct: 23887 actttgtggaatatttcctgaaata 23911
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    cgcgacgccgccgcgcagcc 219
              ||||||||||||||||||||
Sbjct: 583051 cgcgacgccgccgcgcagcc 583070
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>ref|NM_001005249.1| Canis familiaris T-box 2 (TBX2), mRNA
          Length = 2302

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 264 ggcggggctgcacgtctcgg 283
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 191     cggatcggccgcgacgccgccgcgcagc 218
               |||||||||||||||| |||||| ||||
Sbjct: 3060839 cggatcggccgcgacgtcgccgcccagc 3060866
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>ref|NM_005994.3| Homo sapiens T-box 2 (TBX2), mRNA
          Length = 3396

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 497 ggcggggctgcacgtctcgg 516
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>ref|NM_188153.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 804

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 gcggcgctccgatgatggcg 130
           ||||||||||||||||||||
Sbjct: 414 gcggcgctccgatgatggcg 395
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>ref|XM_423571.1| PREDICTED: Gallus gallus similar to Translation initiation factor
           eIF-2B alpha subunit (eIF-2B GDP-GTP exchange factor)
           (LOC425871), partial mRNA
          Length = 372

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 ccccgacgtcgcctcggcgg 173
           ||||||||||||||||||||
Sbjct: 54  ccccgacgtcgcctcggcgg 73
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>ref|XM_616100.2| PREDICTED: Bos taurus similar to T-box 2 (LOC535982), mRNA
          Length = 3380

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 561 ggcggggctgcacgtctcgg 580
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>gb|BC052566.1| Homo sapiens T-box 2, mRNA (cDNA clone MGC:59687 IMAGE:6339405),
           complete cds
          Length = 3059

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 497 ggcggggctgcacgtctcgg 516
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>gb|AC099631.6| Mus musculus chromosome 1, clone RP24-93F22, complete sequence
          Length = 185048

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   taatgcagctgctggtgaag 368
             ||||||||||||||||||||
Sbjct: 56619 taatgcagctgctggtgaag 56600
to top
>gb|AF421216.1| Streptomyces clavuligerus adenine phosphoribosyltransferase (apt)
           and ppGpp synthetase (relA) genes, complete cds
          Length = 3522

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 205 cgccgccgcgcagcccgacc 224
           ||||||||||||||||||||
Sbjct: 774 cgccgccgcgcagcccgacc 793
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 196     cggccgcgacgccgccgcgc 215
               ||||||||||||||||||||
Sbjct: 3271668 cggccgcgacgccgccgcgc 3271687
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>emb|AL359253.17| Human DNA sequence from clone RP11-428L19 on chromosome 9 Contains the
             5' end of the PCSK5 gene for proprotein convertase
             subtilisin/kexin type 5 and two CpG islands, complete
             sequence
          Length = 189608

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cccccgcccctcctccccgc 104
             ||||||||||||||||||||
Sbjct: 15820 cccccgcccctcctccccgc 15839
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>emb|AL772233.6| Mouse DNA sequence from clone RP23-432I13 on chromosome 4, complete
             sequence
          Length = 191553

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   ctttgtggaatattttctga 396
             ||||||||||||||||||||
Sbjct: 99670 ctttgtggaatattttctga 99689
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>gb|BC070054.1| Homo sapiens T-box 2, mRNA (cDNA clone IMAGE:30347457)
          Length = 3360

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 484 ggcggggctgcacgtctcgg 503
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>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    gcgacgccgccgcgcagccc 220
              ||||||||||||||||||||
Sbjct: 135860 gcgacgccgccgcgcagccc 135841
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>emb|AL772409.4| Mouse DNA sequence from clone RP23-323L8 on chromosome 11 Contains the
             5' end of the Fgf18  gene for fibroblast growth factor 18,
             the Npm1 gene for nucleophosmin 1, a single-stranded DNA
             binding protein 1 (Ssbp1) pseudogene, the Tlx3 gene for
             T-cell leukemia, homeobox 3, a novel gene, the 3' end of
             the Ranbp17 gene for RAN binding protein 17, a
             glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene
             and four CpG islands, complete sequence
          Length = 161564

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cccccgcccctcctccccgc 104
             ||||||||||||||||||||
Sbjct: 99685 cccccgcccctcctccccgc 99704
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>emb|AL596324.7| Mouse DNA sequence from clone RP23-324M14 on chromosome 11, complete
              sequence
          Length = 204453

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ggcggggctgcacgtctcgg 188
              ||||||||||||||||||||
Sbjct: 197320 ggcggggctgcacgtctcgg 197339
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>emb|CR860914.1| Pongo pygmaeus mRNA; cDNA DKFZp469O1931 (from clone DKFZp469O1931)
          Length = 1891

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  cccccgcccctcctccccgc 104
           ||||||||||||||||||||
Sbjct: 75  cccccgcccctcctccccgc 56
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>emb|CR857331.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1932 (from clone DKFZp469F1932)
          Length = 1731

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  cccccgcccctcctccccgc 104
           ||||||||||||||||||||
Sbjct: 78  cccccgcccctcctccccgc 59
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>emb|AL832900.1|HSM804211 Homo sapiens mRNA; cDNA DKFZp762H2012 (from clone DKFZp762H2012)
          Length = 2590

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 37  ggcggggctgcacgtctcgg 56
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>gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, complete sequence
          Length = 187364

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   ggcggggctgcacgtctcgg 188
             ||||||||||||||||||||
Sbjct: 16912 ggcggggctgcacgtctcgg 16931
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>gb|AE012390.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 298
            of 460 of the complete genome
          Length = 10194

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  cggatcggccgcgacgccgc 210
            ||||||||||||||||||||
Sbjct: 4556 cggatcggccgcgacgccgc 4537
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>ref|NM_009324.1| Mus musculus T-box 2 (Tbx2), mRNA
          Length = 2280

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 244 ggcggggctgcacgtctcgg 263
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>dbj|AK149348.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930035G23 product:T-box 2, full insert sequence
          Length = 3056

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 516 ggcggggctgcacgtctcgg 535
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>gb|U28049.1|HSU28049 Human TBX2 (TXB2) mRNA, complete cds
          Length = 2279

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 233 ggcggggctgcacgtctcgg 252
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>emb|BX321896.13| Zebrafish DNA sequence from clone RP71-49B22 in linkage group 23,
             complete sequence
          Length = 165985

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   ggcagcttcctcctatgctg 337
             ||||||||||||||||||||
Sbjct: 94076 ggcagcttcctcctatgctg 94095
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>gb|AY192798.1|AH012457S1 Canis familiaris T-box 2 transcription factor (Tbx2) gene, exon 1
          Length = 1035

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 665 ggcggggctgcacgtctcgg 684
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     cggatcggccgcgacgccgc 210
               ||||||||||||||||||||
Sbjct: 1625684 cggatcggccgcgacgccgc 1625703
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>gb|AC025962.5|AC025962 Homo sapiens chromosome 8, clone RP11-790J24, complete sequence
          Length = 167872

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      ccaaaccccaactaaaccaa 20
              ||||||||||||||||||||
Sbjct: 111258 ccaaaccccaactaaaccaa 111239
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     ggaggaggcgctcgaggcct 245
               ||||||||||||||||||||
Sbjct: 3660672 ggaggaggcgctcgaggcct 3660691
to top
>gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160039

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    gccgtcccccgcccctcctccccg 103
             ||||| ||||||||||||||||||
Sbjct: 95245 gccgtgccccgcccctcctccccg 95222
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>gb|AC011236.8| Homo sapiens BAC clone RP11-312D1 from 2, complete sequence
          Length = 188639

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    cgcccctcctccccgcagag 108
             ||||||||||||||||||||
Sbjct: 99648 cgcccctcctccccgcagag 99629
to top
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0583G08
          Length = 135295

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   ggaggaggcgctcgaggcct 245
             ||||||||||||||||||||
Sbjct: 69152 ggaggaggcgctcgaggcct 69171
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>emb|BX929929.1| Gallus gallus finished cDNA, clone ChEST296d2
          Length = 1084

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 ccccgacgtcgcctcggcgg 173
           ||||||||||||||||||||
Sbjct: 72  ccccgacgtcgcctcggcgg 91
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>ref|XM_220810.3| PREDICTED: Rattus norvegicus T-box 2 (predicted) (Tbx2_predicted),
           mRNA
          Length = 2379

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 459 ggcggggctgcacgtctcgg 478
to top
>gb|AF244917.1|AF244917 Mus musculus T-box 2 (Tbx2) gene, complete cds
          Length = 9844

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 169  ggcggggctgcacgtctcgg 188
            ||||||||||||||||||||
Sbjct: 1368 ggcggggctgcacgtctcgg 1387
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     cggccgcgacgccgccgcgc 215
               ||||||||||||||||||||
Sbjct: 5916462 cggccgcgacgccgccgcgc 5916443
to top
>emb|AJ339419.1|HSA339419 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-AC22C
          Length = 653

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 36  ggcggggctgcacgtctcgg 55
to top
>emb|AJ339418.1|HSA339418 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-AA23C
          Length = 626

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 36  ggcggggctgcacgtctcgg 55
to top
>emb|AJ339370.1|HSA339370 Homo sapiens genomic sequence surrounding NotI site, clone NL4-AN6C
          Length = 564

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 36  ggcggggctgcacgtctcgg 55
to top
>emb|AJ339003.1|HSA339003 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-ZG19C
          Length = 759

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 36  ggcggggctgcacgtctcgg 55
to top
>emb|AJ334959.1|HSA334959 Homo sapiens genomic sequence surrounding NotI site, clone NB1-087C
          Length = 810

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 36  ggcggggctgcacgtctcgg 55
to top
>emb|AJ334803.1|HSA334803 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-CO17C
          Length = 658

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 36  ggcggggctgcacgtctcgg 55
to top
>emb|AJ341965.1|HSA341965 Homo sapiens genomic sequence surrounding NotI site, clone NL4-CB9R
          Length = 729

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 36  ggcggggctgcacgtctcgg 55
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>gb|U23409.1|TAU23409 Triticum aestivum p34cdc2 (cdc2TaA) mRNA, complete cds
          Length = 1170

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  tcccccgcccctcctccccg 103
           ||||||||||||||||||||
Sbjct: 85  tcccccgcccctcctccccg 104
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>gb|AC005746.1|AC005746 Homo sapiens chromosome 17, clone hRPK.332_H_18, complete sequence
          Length = 189356

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   ggcggggctgcacgtctcgg 188
             ||||||||||||||||||||
Sbjct: 14540 ggcggggctgcacgtctcgg 14521
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>gb|U15566.1|MMU15566 Mus musculus Tbx2 mRNA, complete cds
          Length = 2280

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 244 ggcggggctgcacgtctcgg 263
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>gb|AC132376.4| Mus musculus BAC clone RP24-80J23 from 1, complete sequence
          Length = 191858

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    taatgcagctgctggtgaag 368
              ||||||||||||||||||||
Sbjct: 115783 taatgcagctgctggtgaag 115764
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>dbj|AB209378.1| Homo sapiens mRNA for T-box 2 variant protein
          Length = 5219

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 28  ggcggggctgcacgtctcgg 47
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>emb|AJ342204.1|HSA342204 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-DA20C
          Length = 685

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ggcggggctgcacgtctcgg 188
           ||||||||||||||||||||
Sbjct: 36  ggcggggctgcacgtctcgg 55
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>dbj|AP003697.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1261H7, complete
             sequence
          Length = 170468

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ccaaaccccaactaaaccaa 20
             ||||||||||||||||||||
Sbjct: 59892 ccaaaccccaactaaaccaa 59911


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,496,874
Number of Sequences: 3902068
Number of extensions: 3496874
Number of successful extensions: 84204
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81468
Number of HSP's gapped (non-prelim): 2736
length of query: 404
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 382
effective length of database: 17,147,199,772
effective search space: 6550230312904
effective search space used: 6550230312904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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