ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22c06 |
|---|---|
| Clone Library Name | barley_pub |
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/67 (29%), Positives = 31/67 (46%) Frame = -3 Query: 206 ASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSA 27 +++ TS S P T S+ S + + + T+ SSSTS AT+ S +T+ Sbjct: 200 STTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSSTSIG 259 Query: 26 DPNSYTT 6 YTT Sbjct: 260 TSTHYTT 266
>NUDEL_DROME (P98159) Serine protease nudel precursor (EC 3.4.21.-)| Length = 2616 Score = 31.2 bits (69), Expect = 1.3 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Frame = -3 Query: 257 DNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNT---A 87 D+ LK DE D +S +T ++GP A + L + +T +T Sbjct: 1473 DDEDLKAEQDEEDLLKSTTSLGQTETTQGPMDLSFAEQITSTTSDDLSITDETTSTDFTV 1532 Query: 86 ESSSTSPATLLSILPTTTS 30 S+TSP+TLL PTTT+ Sbjct: 1533 SDSATSPSTLL---PTTTN 1548
>PBP2_HAEIN (P44469) Penicillin-binding protein 2 (PBP-2)| Length = 651 Score = 30.8 bits (68), Expect = 1.7 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = -3 Query: 266 PSPDNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTA 87 PS DNN + + D+K L + R +S+ AT A P + ++ + T N Sbjct: 298 PSYDNNLFVDGISSEDYKRLLNDLARPLYSR---ATQGAYPPASTVKPFIAVAAQTENVI 354 Query: 86 ESSSTSPATLLSILPTTT 33 ++T +LP +T Sbjct: 355 TPNTTIFDPGYWVLPNST 372
>NAS32_CAEEL (O16977) Zinc metalloproteinase nas-32 precursor (EC 3.4.24.21)| (Nematode astacin 32) Length = 651 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/81 (33%), Positives = 37/81 (45%) Frame = -3 Query: 257 DNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESS 78 DNNS +E + DWKF G ++ P SY + K TWN + + Sbjct: 24 DNNSEEERDRKFDWKF--------ENENGKPEHETVTVPKLPDGSYFW--KWTWN-SRIN 72 Query: 77 STSPATLLSILPTTTSADPNS 15 ST+ AT S + T+TSA S Sbjct: 73 STTAATPTSTVTTSTSAPTTS 93
>YKD8_YEAST (P32862) Putative 128.2 kDa transcriptional regulatory protein in| PTM1-IXR1 intergenic region Length = 1170 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Frame = -3 Query: 269 FPSPDNNSLKEPLDER-----------DWKFLASSKCRTSWSKGPDATDSALSPLQAIAS 123 FP PD N +K P+DE +++ + S + S P++ D +S + Sbjct: 712 FPEPDINDVKPPVDEEVSTGNGNTKTSEFEIGSESAGHMNPSNSPNSMDENISHYSVLFK 771 Query: 122 YLFLVKDTWNTAESSSTSPATLLSI 48 L+++ +++ +S + LL+I Sbjct: 772 RLYVLLSVFDSLQSCAFGGPKLLNI 796
>CP21A_PIG (P15540) Cytochrome P450 21 (EC 1.14.99.10) (Cytochrome P450 XXI)| (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) Length = 492 Score = 30.4 bits (67), Expect = 2.2 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 100 LGTLRNQAPRRQQLSSPFCPQLQAQTPTPI 11 LG + PR +QL+ FC +++AQ TP+ Sbjct: 130 LGVRSSMEPRVEQLTQEFCERMRAQAGTPV 159
>FABB_HAEIN (P43710) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase I) (Beta-ketoacyl-ACP synthase I) (KAS I) Length = 406 Score = 30.0 bits (66), Expect = 2.9 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Frame = +1 Query: 22 GSALVVVGKMERRVAGDVELDSAVFQVSLTKNRYEAIACNGESAE-------SVASGPFD 180 G A+VVV ++E +A ++ + + T + Y+ +A +GE AE + P D Sbjct: 233 GGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAERCMKQAMATVDTPID 292 Query: 181 QLVLH 195 + +H Sbjct: 293 YINVH 297
>PRY2_YEAST (P36110) Protein PRY2 precursor (Pathogen related in Sc 2)| Length = 329 Score = 29.6 bits (65), Expect = 3.8 Identities = 18/66 (27%), Positives = 34/66 (51%) Frame = -3 Query: 203 SSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSAD 24 S+ S ++ +A +A + +QA+ + +D T +SST P + + PTTT+ Sbjct: 96 SATFEESSTETSEAFSTATATIQAVQTSASATQDDVTTTLTSSTQPTS--TTTPTTTTTS 153 Query: 23 PNSYTT 6 P + T+ Sbjct: 154 PTTTTS 159
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 29.6 bits (65), Expect = 3.8 Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 12/98 (12%) Frame = -3 Query: 278 VEPFPSPDNNSLKEPL-------DERDWKFLASSKCRTSWSK-GPDATDSALSPLQ---- 135 + P P+ + +L + + + L S C T + K G + + +P+ Sbjct: 997 ITPIPNKEPGALTTAMTCQCRNDSSQPFVLLKESNCLTEFGKNGAYSASVSFNPMTSFVP 1056 Query: 134 AIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADP 21 A +Y FL+ T + S++ T+ +LPTTT+ P Sbjct: 1057 ATGTYEFLINVTNRASGESASHIFTMNVVLPTTTTETP 1094 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/65 (33%), Positives = 33/65 (50%) Frame = -3 Query: 203 SSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSAD 24 SS TS P +T S+ S + S L + T + ES++ S T +S +TTS+ Sbjct: 681 SSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQESTTTSEESTTDSSTTTISDT-STTSSS 739 Query: 23 PNSYT 9 P+S T Sbjct: 740 PSSTT 744
>IL27B_HUMAN (Q14213) Interleukin-27 beta chain precursor (IL-27B) (Epstein-Barr| virus-induced gene 3 protein) (EBV-induced gene 3 protein) Length = 229 Score = 29.3 bits (64), Expect = 4.9 Identities = 19/67 (28%), Positives = 26/67 (38%) Frame = +2 Query: 65 LATWSLIPQCSKCP*PKTGMRQLLVMGRAPNQ*HLVLLTN*SCTWKMPKISNHVHQVALL 244 L W+ P CS P + V RA V C+W +P N V+ + Sbjct: 9 LVLWASCPPCSGRKGPPAALTLPRVQCRASRYPIAV-----DCSWTLPPAPNSTSPVSFI 63 Query: 245 SCYCLGM 265 + Y LGM Sbjct: 64 ATYRLGM 70
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 29.3 bits (64), Expect = 4.9 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Frame = -3 Query: 197 KCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSA--- 27 K +T S+ P+AT + +SP + T + + S T+ S P TSA Sbjct: 812 KTKTVTSEAPEATTTTVSPKTYTTA-------TVTQCDDNGCSTKTVTSECPEETSATTT 864 Query: 26 DPNSYTTI 3 P SYTT+ Sbjct: 865 SPKSYTTV 872
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = -3 Query: 164 ATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSYTT 6 A SALS I + + T T S+ST+P T ++ +TTS P + TT Sbjct: 107 AISSALSK-DGIYTAIPTSTSTTTTKSSTSTTPTTTITSTTSTTSTTPTTSTT 158
>TRPG_PICAN (P09575) Anthranilate synthase component 2 (EC 4.1.3.27)| (Anthranilate synthase component II) [Includes: Glutamine amidotransferase; Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (PRAI)] (Fragment) Length = 367 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%) Frame = -1 Query: 268 FHPQTITA*KSHLM-----NVIGNFWHLPSAGLVGQKDQML 161 FHP++I + HLM NV G +W + G +K+ +L Sbjct: 174 FHPESILTEEGHLMIQNILNVSGGYWEENANGAAQRKESIL 214
>CORA_HPBDW (P17191) Core antigen| Length = 305 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = -3 Query: 161 TDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSY 12 +DS + ++ L++D W T + +L +++P TT+ P Y Sbjct: 83 SDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGY 132
>CORA_HPBDC (P30027) Core antigen| Length = 305 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = -3 Query: 161 TDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSY 12 +DS + ++ L++D W T + +L +++P TT+ P Y Sbjct: 83 SDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGY 132
>CORA_HPBDB (P17190) Core antigen| Length = 305 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = -3 Query: 161 TDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSY 12 +DS + ++ L++D W T + +L +++P TT+ P Y Sbjct: 83 SDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGY 132
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 28.5 bits (62), Expect = 8.4 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Frame = -3 Query: 272 PFPSPDNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWN 93 P P P ++ P +S S + GP T S P+ ++ T + Sbjct: 60 PSPVPTTSTTSAPTTS------TTSASTASTTSGPGTTPS---PVPTTSTTSAPTTSTTS 110 Query: 92 TAESSSTS-PATLLSILPTT-TSADPNSYTT 6 + +S+TS P T LS +PTT T++ P + TT Sbjct: 111 ASTASTTSGPGTSLSPVPTTSTTSAPTTSTT 141
>EXOD_BPT4 (P04536) Exodeoxyribonuclease (EC 3.1.11.1) (3'-5' exonuclease)| Length = 227 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = +1 Query: 283 FTKSTLERFLHIVNSPDASKTANGILQEMSQLEETRKFHDYLQS 414 FTKST+E + + SP+A K +++S ++ KF+DY+ + Sbjct: 60 FTKSTIEWWKN--QSPEARKNIAPSDEDVSTIDGIAKFNDYINA 101 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,688,886 Number of Sequences: 219361 Number of extensions: 1518623 Number of successful extensions: 4323 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4310 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
