ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22c03 |
|---|---|
| Clone Library Name | barley_pub |
>NOMO3_HUMAN (P69849) Nodal modulator 3 precursor (pM5 protein 3)| Length = 1222 Score = 58.9 bits (141), Expect = 4e-09 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 7/141 (4%) Frame = +1 Query: 10 VTSKKYDIVAEKDHYKFNRLENFMILPNMESIDDIKSVRYDVCGVVQ------TVTPNSK 171 +T+ Y I A+K+H F + I PN + DI + + VCG + TV +K Sbjct: 370 ITTGTYTIHAQKEHLYFETV-TIKIAPNTPQLADIVATGFSVCGQISIIRFPDTVKQMNK 428 Query: 172 AMVTLTHGPENVKPRRKMVSENGRFCFEVSTGEYRLSALPVDSEGSSSLLFSPGYIDVYV 351 V L+ ++ +G FCF+ + G Y++ + ++E + L P + V Sbjct: 429 YKVVLSSQDKDKSLVTVETDAHGSFCFKANPGTYKVQVMVPEAETRAGLTLKPQTFPLTV 488 Query: 352 -KRPLLDVQFSQSQVNVHGKI 411 RP++DV F Q +V GK+ Sbjct: 489 TDRPVMDVAFVQFLASVSGKV 509
>NOMO1_HUMAN (Q15155) Nodal modulator 1 precursor (pM5)| Length = 1222 Score = 58.9 bits (141), Expect = 4e-09 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 7/141 (4%) Frame = +1 Query: 10 VTSKKYDIVAEKDHYKFNRLENFMILPNMESIDDIKSVRYDVCGVVQ------TVTPNSK 171 +T+ Y I A+K+H F + I PN + DI + + VCG + TV +K Sbjct: 370 ITTGTYTIHAQKEHLYFETV-TIKIAPNTPQLADIIATGFSVCGQISIIRFPDTVKQMNK 428 Query: 172 AMVTLTHGPENVKPRRKMVSENGRFCFEVSTGEYRLSALPVDSEGSSSLLFSPGYIDVYV 351 V L+ ++ +G FCF+ G Y++ + ++E + L P + V Sbjct: 429 YKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLKPQTFPLTV 488 Query: 352 -KRPLLDVQFSQSQVNVHGKI 411 RP++DV F Q +V GK+ Sbjct: 489 TNRPMMDVAFVQFLASVSGKV 509
>NOMO2_HUMAN (Q5JPE7) Nodal modulator 2 precursor (pM5 protein 2)| Length = 1267 Score = 58.2 bits (139), Expect = 8e-09 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 7/141 (4%) Frame = +1 Query: 10 VTSKKYDIVAEKDHYKFNRLENFMILPNMESIDDIKSVRYDVCGVVQ------TVTPNSK 171 +T+ Y I A+K+H F + I PN + DI + + VCG + TV +K Sbjct: 370 ITTGTYTIHAQKEHLYFETV-TIKIAPNTPQLADIVATGFSVCGRISIIRFPDTVKQMNK 428 Query: 172 AMVTLTHGPENVKPRRKMVSENGRFCFEVSTGEYRLSALPVDSEGSSSLLFSPGYIDVYV 351 V L+ ++ +G FCF+ G Y++ + ++E + L P + V Sbjct: 429 YKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLKPQTFPLTV 488 Query: 352 -KRPLLDVQFSQSQVNVHGKI 411 RP++DV F Q +V GK+ Sbjct: 489 TDRPVMDVAFVQFLASVSGKV 509
>ZN645_HUMAN (Q8N7E2) Zinc finger protein 645| Length = 425 Score = 32.7 bits (73), Expect = 0.34 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Frame = +1 Query: 7 PVTSKKYDIVAEKDHYK-----FNRLENFMILPNMESIDDIKSVRYDVCGVVQTVTPNSK 171 P S + I+ +K HY + + + M P + + SVR V + T P+S Sbjct: 267 PAVSSPHHIIPQKQHYAPPPSPSSPVNHQMPYPPQDVVTP-NSVRSQVPALTTTYDPSSG 325 Query: 172 AMVTLTHGPENVKPRRKMVSENGR-FCFEVSTGEYRLSALPVDSEGSSSL 318 ++ N P R S+NG E ++ Y L+ LP +E +L Sbjct: 326 YIIVKVPPDMNSPPLRAPQSQNGNPSASEFASHHYNLNILPQFTENQETL 375
>ASTE_CHRVO (Q7NU26) Succinylglutamate desuccinylase (EC 3.1.-.-)| Length = 333 Score = 32.0 bits (71), Expect = 0.58 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +1 Query: 7 PVTSKKYDIVAEKDHYKFN---RLENFMILPNMESIDDIKSVRYDVCG 141 P+ KYD+V + +K N +ENF +LP+ I + +VRY G Sbjct: 256 PLFRAKYDLVKHSEAFKLNLADSVENFTLLPDGMLIAEDGAVRYQATG 303
>PROA_BACTN (Q8A1E8) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 30.0 bits (66), Expect = 2.2 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 11/91 (12%) Frame = +1 Query: 118 SVRYDVCGVVQTVTPN-----------SKAMVTLTHGPENVKPRRKMVSENGRFCFEVST 264 SV + V G++ PN S L G + R ++S + + Sbjct: 109 SVPFGVIGIIYEARPNVSFDVFSLCLKSGNACILKGGSDADDSNRAIISVIHKVLEKFHV 168 Query: 265 GEYRLSALPVDSEGSSSLLFSPGYIDVYVKR 357 + + LP D E +++LL + GY+D+ + R Sbjct: 169 NPHIVELLPADREATAALLNATGYVDLIIPR 199
>PROA_BACFR (Q64Z29) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 415 Score = 29.3 bits (64), Expect = 3.7 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 11/103 (10%) Frame = +1 Query: 82 ILPNMESIDDIKSVRYDVCGVVQTVTPN-----------SKAMVTLTHGPENVKPRRKMV 228 I PN + I SV + V G++ PN S L G + R +V Sbjct: 96 IRPNGMRLTKI-SVPFGVIGIIYEARPNVSFDVFSLCLKSGNACILKGGSDADYSNRAIV 154 Query: 229 SENGRFCFEVSTGEYRLSALPVDSEGSSSLLFSPGYIDVYVKR 357 + + + + + LP D E + LL + GY+D+ + R Sbjct: 155 EVIHQVLRQFNIDTHMVELLPADREATRELLHATGYVDLIIPR 197
>PROA_BACFN (Q5LI24) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 415 Score = 29.3 bits (64), Expect = 3.7 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 11/103 (10%) Frame = +1 Query: 82 ILPNMESIDDIKSVRYDVCGVVQTVTPN-----------SKAMVTLTHGPENVKPRRKMV 228 I PN + I SV + V G++ PN S L G + R +V Sbjct: 96 IRPNGMRLTKI-SVPFGVIGIIYEARPNVSFDVFSLCLKSGNACILKGGSDADYSNRAIV 154 Query: 229 SENGRFCFEVSTGEYRLSALPVDSEGSSSLLFSPGYIDVYVKR 357 + + + + + LP D E + LL + GY+D+ + R Sbjct: 155 EVIHQVLRQFNIDTHMVELLPADREATRELLHATGYVDLIIPR 197
>CBIO2_MYCPU (Q98QH4) Cobalt import ATP-binding protein cbiO 2| Length = 304 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = +1 Query: 73 NFMILPNMESIDDIKSVRYDVCGVVQTVTPNSKAMVTLTHGPENV--KPRRKMVSENGRF 246 +F++L + D + V+ D+ + + N K ++ +TH +NV + +R +V + G+ Sbjct: 181 DFLVLDEPTAGLDPQGVK-DILDIFDNINKNGKTVIMVTHDLDNVLERTKRTLVFDKGKL 239 Query: 247 CFEVSTGE 270 + T E Sbjct: 240 IRDAGTYE 247
>Y190_UREPA (Q9PQV3) Hypothetical UPF0230 protein UU190| Length = 216 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = +1 Query: 19 KKYDIVAEKDHYKFNRLENFMILPNMESIDDIKSVR 126 K DI+ ++H++ N ++N IL ++E+ I S++ Sbjct: 143 KLLDIIDNQNHWRTNGIKNIAILTDLENESQINSLK 178
>BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protein 1)| Length = 756 Score = 28.1 bits (61), Expect = 8.3 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Frame = +1 Query: 100 SIDDIKSVRYDVCGVVQTVTPNSKAMV-----------TLTHGPENVKPRRKMVSENGRF 246 ++ DI + + + G+ + + P K MV TL GPE++KP R ++ E G Sbjct: 350 AVQDITAAKPRLKGLPKNL-PRKKEMVAKDRADEILEETLLRGPEDMKPGRVVIKEEGES 408 Query: 247 CFEVSTGEYRLSALPVDSEGS 309 E E A P EG+ Sbjct: 409 KLEPGDEE----ASPPTQEGA 425
>FABPL_MOUSE (P12710) Fatty acid-binding protein, liver (L-FABP) (14 kDa| selenium-binding protein) Length = 127 Score = 28.1 bits (61), Expect = 8.3 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Frame = +1 Query: 52 YKFNRLENFMILPNMESI---DDIKSVRYDVCGVVQTVTPNSKAMVTLTHGPENVKPRRK 222 Y+ ENF P M++I +D+ D+ GV + V K +T+T+GP+ V+ Sbjct: 7 YQLQSQENFE--PFMKAIGLPEDLIQKGKDIKGVSEIVHEGKKIKLTITYGPKVVRNEFT 64 Query: 223 MVSENGRFC-FEVSTGE 270 + G C E TGE Sbjct: 65 L----GEECELETMTGE 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,745,630 Number of Sequences: 219361 Number of extensions: 1091279 Number of successful extensions: 2837 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2783 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2831 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
