ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl22c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predic... 414 e-113
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 119 7e-24
3dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic D... 119 7e-24
4dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic D... 119 7e-24
5emb|BX323881.7| Zebrafish DNA sequence from clone CH211-274G13 i... 50 0.006
6emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on ch... 46 0.090
7gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, comple... 46 0.090
8gb|BT014138.1| Lycopersicon esculentum clone 133257F, mRNA sequence 44 0.35
9emb|AL928807.3| Mouse DNA sequence from clone RP23-97D20 on chro... 44 0.35
10gb|AY520538.1| Homo sapiens DMC1 dosage suppressor of mck1 homol... 42 1.4
11gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete se... 42 1.4
12emb|AL022320.23|HS199H16 Human DNA sequence from clone RP1-199H1... 42 1.4
13emb|BX537340.15| Zebrafish DNA sequence from clone DKEYP-93A2 in... 42 1.4
14gb|AC112184.2| Homo sapiens chromosome 5 clone RP11-168A11, comp... 42 1.4
15gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I... 42 1.4
16emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 i... 42 1.4
17gb|AC171104.1| Drosophila melanogaster clone CH221-06A19, comple... 40 5.5
18gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid p... 40 5.5
19gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L... 40 5.5
20gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, comple... 40 5.5
21gb|AC130389.3| Drosophila melanogaster 3 BAC CH221-6A19 (Childre... 40 5.5
22emb|AL122006.11|HSJ730H16 Human DNA sequence from clone RP4-730H... 40 5.5
23gb|AC105293.2| Drosophila melanogaster 3L BAC RP98-45O17 (Roswel... 40 5.5
24gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, compl... 40 5.5
25gb|AC093501.4| Drosophila melanogaster 3L BAC RP98-48E9 (Roswell... 40 5.5
26gb|AC018919.13| Homo sapiens 3 BAC RP11-88P6 (Roswell Park Cance... 40 5.5
27ref|XM_397260.2| PREDICTED: Apis mellifera similar to GA10703-PA... 40 5.5
28emb|BX322555.7| Zebrafish DNA sequence from clone DKEY-19D21 in ... 40 5.5
29gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 5.5
30emb|BX469895.7| Zebrafish DNA sequence from clone DKEY-152C18 in... 40 5.5
31emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 i... 40 5.5
32emb|AL121595.5|CNS01DRZ Human chromosome 14 DNA sequence BAC C-3... 40 5.5
33gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 ... 40 5.5
34dbj|AP000464.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.5
35dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 5.5
36gb|AE017195.1| Bacillus cereus ATCC 10987 plasmid pBc10987, comp... 40 5.5
37emb|BX005095.6| Zebrafish DNA sequence from clone CH211-189B21, ... 40 5.5
38dbj|AB017652.1| Homo sapiens genomic DNA, chromosome 11q23.2, cl... 40 5.5
39gb|AC132328.3| Mus musculus BAC clone RP24-195C6 from 10, comple... 40 5.5 
>ref|NM_189191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3582

 Score =  414 bits (209), Expect = e-113
 Identities = 356/405 (87%)
 Strand = Plus / Plus

                                                                        
Query: 9    ggttacatccaagaaatatgatatagttgctgagaaggatcattataagttcaaccgttt 68
            |||||| |||||||| |||  ||| || ||||||||||||||||| || |||||||||||
Sbjct: 1089 ggttacctccaagaagtatactattgtggctgagaaggatcattacaaattcaaccgttt 1148

                                                                        
Query: 69   ggagaatttcatgattttgccaaatatggaaagcattgatgatatcaaatcagttcgata 128
            |||||||||||||||||||||||| ||||  || ||||||||||||| ||||||||| ||
Sbjct: 1149 ggagaatttcatgattttgccaaacatggctagtattgatgatatcacatcagttcggta 1208

                                                                        
Query: 129  tgatgtatgtggtgttgttcaaacagtaactccaaactccaaagccatggtaactttaac 188
            ||||||||| ||| |||||| ||||||||| ||||| |||||| | ||||| ||||||||
Sbjct: 1209 tgatgtatgcggtattgttcgaacagtaaccccaaattccaaatcaatggtgactttaac 1268

                                                                        
Query: 189  acatgggcctgaaaatgtaaagccgcggaggaaaatggtcagcgaaaatggaagattctg 248
            |||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||| ||
Sbjct: 1269 acatgggcctgaaaatgtaaagccacagaggaaactggtgagcgaaaatggaagattttg 1328

                                                                        
Query: 249  ctttgaggtttctactggtgaataccgattatctgctttacctgtagattccgaaggttc 308
            ||||||||||  | | ||||||||||| ||||||||  ||||||||||| ||||||||||
Sbjct: 1329 ctttgaggttcttgccggtgaataccgcttatctgccctacctgtagataccgaaggttc 1388

                                                                        
Query: 309  ttccagtcttttgttttctccaggatatatcgatgtctatgtcaagcgcccgttgcttga 368
            |||||||||| ||||||| ||||||| ||| |||||| |||||||  | || ||||||||
Sbjct: 1389 ttccagtcttatgttttcaccaggatttattgatgtcaatgtcaacagtccattgcttga 1448

                                                         
Query: 369  tgtacagttctctcagtcacaagtcaatgttcatggtaagatcct 413
            | || ||||||||||||||||||||||  ||||||||||| ||||
Sbjct: 1449 tatagagttctctcagtcacaagtcaaccttcatggtaaggtcct 1493
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  119 bits (60), Expect = 7e-24
 Identities = 105/120 (87%)
 Strand = Plus / Minus

                                                                            
Query: 265      ggtgaataccgattatctgctttacctgtagattccgaaggttcttccagtcttttgttt 324
                ||||||||||| ||||||||  ||||||||||| |||||||||||||||||||| |||||
Sbjct: 11028844 ggtgaataccgcttatctgccctacctgtagataccgaaggttcttccagtcttatgttt 11028785

                                                                            
Query: 325      tctccaggatatatcgatgtctatgtcaagcgcccgttgcttgatgtacagttctctcag 384
                || ||||||| ||| |||||| |||||||  | || ||||||||| || |||||||||||
Sbjct: 11028784 tcaccaggatttattgatgtcaatgtcaacagtccattgcttgatatagagttctctcag 11028725



 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                            
Query: 181      actttaacacatgggcctgaaaatgtaaagccgcggaggaaaatggtcagcgaaaatgga 240
                |||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||
Sbjct: 11029284 actttaacacatgggcctgaaaatgtaaagccacagaggaaactggtgagcgaaaatgga 11029225

                                 
Query: 241      agattctgctttgaggt 257
                ||||| |||||||||||
Sbjct: 11029224 agattttgctttgaggt 11029208



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 81       gattttgccaaatatggaaagcattgatgatatcaaatcagttcgatatgatgtatgtgg 140
                |||||||||||| ||||  || ||||||||||||| ||||||||| ||||||||||| ||
Sbjct: 11029465 gattttgccaaacatggctagtattgatgatatcacatcagttcggtatgatgtatgcgg 11029406

                                                         
Query: 141      tgttgttcaaacagtaactccaaactccaaagccatggtaa 181
                | |||||| ||||||||| ||||| |||||| | |||||||
Sbjct: 11029405 tattgttcgaacagtaaccccaaattccaaatcaatggtaa 11029365



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 9        ggttacatccaagaaatatgatatagttgctgagaaggatcattataagttcaaccgttt 68
                |||||| |||||||| |||  ||| || ||||||||||||||||| || |||||||||||
Sbjct: 11029635 ggttacctccaagaagtatactattgtggctgagaaggatcattacaaattcaaccgttt 11029576

                             
Query: 69       ggagaatttcatg 81
                |||||||||||||
Sbjct: 11029575 ggagaatttcatg 11029563



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 382      cagtcacaagtcaatgttcatggtaagatcct 413
                ||||||||||||||  ||||||||||| ||||
Sbjct: 11028596 cagtcacaagtcaaccttcatggtaaggtcct 11028565
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>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score =  119 bits (60), Expect = 7e-24
 Identities = 105/120 (87%)
 Strand = Plus / Minus

                                                                         
Query: 265   ggtgaataccgattatctgctttacctgtagattccgaaggttcttccagtcttttgttt 324
             ||||||||||| ||||||||  ||||||||||| |||||||||||||||||||| |||||
Sbjct: 57726 ggtgaataccgcttatctgccctacctgtagataccgaaggttcttccagtcttatgttt 57667

                                                                         
Query: 325   tctccaggatatatcgatgtctatgtcaagcgcccgttgcttgatgtacagttctctcag 384
             || ||||||| ||| |||||| |||||||  | || ||||||||| || |||||||||||
Sbjct: 57666 tcaccaggatttattgatgtcaatgtcaacagtccattgcttgatatagagttctctcag 57607



 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                         
Query: 181   actttaacacatgggcctgaaaatgtaaagccgcggaggaaaatggtcagcgaaaatgga 240
             |||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||
Sbjct: 58166 actttaacacatgggcctgaaaatgtaaagccacagaggaaactggtgagcgaaaatgga 58107

                              
Query: 241   agattctgctttgaggt 257
             ||||| |||||||||||
Sbjct: 58106 agattttgctttgaggt 58090



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                         
Query: 81    gattttgccaaatatggaaagcattgatgatatcaaatcagttcgatatgatgtatgtgg 140
             |||||||||||| ||||  || ||||||||||||| ||||||||| ||||||||||| ||
Sbjct: 58347 gattttgccaaacatggctagtattgatgatatcacatcagttcggtatgatgtatgcgg 58288

                                                      
Query: 141   tgttgttcaaacagtaactccaaactccaaagccatggtaa 181
             | |||||| ||||||||| ||||| |||||| | |||||||
Sbjct: 58287 tattgttcgaacagtaaccccaaattccaaatcaatggtaa 58247



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 9     ggttacatccaagaaatatgatatagttgctgagaaggatcattataagttcaaccgttt 68
             |||||| |||||||| |||  ||| || ||||||||||||||||| || |||||||||||
Sbjct: 58517 ggttacctccaagaagtatactattgtggctgagaaggatcattacaaattcaaccgttt 58458

                          
Query: 69    ggagaatttcatg 81
             |||||||||||||
Sbjct: 58457 ggagaatttcatg 58445



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 382   cagtcacaagtcaatgttcatggtaagatcct 413
             ||||||||||||||  ||||||||||| ||||
Sbjct: 57478 cagtcacaagtcaaccttcatggtaaggtcct 57447
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>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0487H02
          Length = 145491

 Score =  119 bits (60), Expect = 7e-24
 Identities = 105/120 (87%)
 Strand = Plus / Minus

                                                                          
Query: 265    ggtgaataccgattatctgctttacctgtagattccgaaggttcttccagtcttttgttt 324
              ||||||||||| ||||||||  ||||||||||| |||||||||||||||||||| |||||
Sbjct: 131686 ggtgaataccgcttatctgccctacctgtagataccgaaggttcttccagtcttatgttt 131627

                                                                          
Query: 325    tctccaggatatatcgatgtctatgtcaagcgcccgttgcttgatgtacagttctctcag 384
              || ||||||| ||| |||||| |||||||  | || ||||||||| || |||||||||||
Sbjct: 131626 tcaccaggatttattgatgtcaatgtcaacagtccattgcttgatatagagttctctcag 131567



 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                          
Query: 181    actttaacacatgggcctgaaaatgtaaagccgcggaggaaaatggtcagcgaaaatgga 240
              |||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||
Sbjct: 132126 actttaacacatgggcctgaaaatgtaaagccacagaggaaactggtgagcgaaaatgga 132067

                               
Query: 241    agattctgctttgaggt 257
              ||||| |||||||||||
Sbjct: 132066 agattttgctttgaggt 132050



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                          
Query: 81     gattttgccaaatatggaaagcattgatgatatcaaatcagttcgatatgatgtatgtgg 140
              |||||||||||| ||||  || ||||||||||||| ||||||||| ||||||||||| ||
Sbjct: 132307 gattttgccaaacatggctagtattgatgatatcacatcagttcggtatgatgtatgcgg 132248

                                                       
Query: 141    tgttgttcaaacagtaactccaaactccaaagccatggtaa 181
              | |||||| ||||||||| ||||| |||||| | |||||||
Sbjct: 132247 tattgttcgaacagtaaccccaaattccaaatcaatggtaa 132207



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                          
Query: 9      ggttacatccaagaaatatgatatagttgctgagaaggatcattataagttcaaccgttt 68
              |||||| |||||||| |||  ||| || ||||||||||||||||| || |||||||||||
Sbjct: 132477 ggttacctccaagaagtatactattgtggctgagaaggatcattacaaattcaaccgttt 132418

                           
Query: 69     ggagaatttcatg 81
              |||||||||||||
Sbjct: 132417 ggagaatttcatg 132405



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 382    cagtcacaagtcaatgttcatggtaagatcct 413
              ||||||||||||||  ||||||||||| ||||
Sbjct: 131438 cagtcacaagtcaaccttcatggtaaggtcct 131407
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>emb|BX323881.7| Zebrafish DNA sequence from clone CH211-274G13 in linkage group 14,
             complete sequence
          Length = 157039

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 131   atgtatgtggtgttgttcaaacagt 155
             |||||||||||||||||||||||||
Sbjct: 14745 atgtatgtggtgttgttcaaacagt 14769
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>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete
             sequence
          Length = 149561

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 40    gagaaggatcattataagttcaa 62
             |||||||||||||||||||||||
Sbjct: 25162 gagaaggatcattataagttcaa 25184
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>gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, complete genome
          Length = 149696

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 211   ccgcggaggaaaatggtcagcgaaaat 237
             |||||||| ||||||||||||||||||
Sbjct: 16986 ccgcggagaaaaatggtcagcgaaaat 17012
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>gb|BT014138.1| Lycopersicon esculentum clone 133257F, mRNA sequence
          Length = 1434

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 126  atatgatgtatgtggtgttgttcaaacagt 155
            ||||||||||||||||||||  ||||||||
Sbjct: 1303 atatgatgtatgtggtgttgcacaaacagt 1332
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>emb|AL928807.3| Mouse DNA sequence from clone RP23-97D20 on chromosome 2, complete
            sequence
          Length = 99202

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 156  aactccaaactccaaagccatg 177
            ||||||||||||||||||||||
Sbjct: 4911 aactccaaactccaaagccatg 4932
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>gb|AY520538.1| Homo sapiens DMC1 dosage suppressor of mck1 homolog, meiosis-specific
             homologous recombination (yeast) (DMC1) gene, complete cds
          Length = 54397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 38    ctgagaaggatcattataagttcaa 62
             ||||||| |||||||||||||||||
Sbjct: 24181 ctgagaaagatcattataagttcaa 24205
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>gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete sequence
          Length = 127300

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 318   tttgttttctccaggatatat 338
             |||||||||||||||||||||
Sbjct: 39073 tttgttttctccaggatatat 39053
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>emb|AL022320.23|HS199H16 Human DNA sequence from clone RP1-199H16 on chromosome 22q12-13,
             complete sequence
          Length = 85500

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 38    ctgagaaggatcattataagttcaa 62
             ||||||| |||||||||||||||||
Sbjct: 34268 ctgagaaagatcattataagttcaa 34244
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>emb|BX537340.15| Zebrafish DNA sequence from clone DKEYP-93A2 in linkage group 7,
             complete sequence
          Length = 192070

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    ttcatgattttgccaaatatg 96
             |||||||||||||||||||||
Sbjct: 25792 ttcatgattttgccaaatatg 25772
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>gb|AC112184.2| Homo sapiens chromosome 5 clone RP11-168A11, complete sequence
          Length = 173346

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 306   ttcttccagtcttttgttttctcca 330
             ||||||||||||||| |||||||||
Sbjct: 94039 ttcttccagtcttttattttctcca 94015
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>gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I18, complete sequence
          Length = 175561

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 306   ttcttccagtcttttgttttctcca 330
             ||||||||||||||| |||||||||
Sbjct: 12916 ttcttccagtcttttattttctcca 12892
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>emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 in linkage group 8,
              complete sequence
          Length = 209195

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     ttcatgattttgccaaatatg 96
              |||||||||||||||||||||
Sbjct: 119871 ttcatgattttgccaaatatg 119851
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>gb|AC171104.1| Drosophila melanogaster clone CH221-06A19, complete sequence
          Length = 125302

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cagttcgatatgatgtatgt 138
             ||||||||||||||||||||
Sbjct: 71344 cagttcgatatgatgtatgt 71325
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>gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atccaagaaatatgatatag 34
             ||||||||||||||||||||
Sbjct: 95951 atccaagaaatatgatatag 95932
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>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds
          Length = 660392

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   aagattctgctttgaggttt 259
             ||||||||||||||||||||
Sbjct: 82619 aagattctgctttgaggttt 82638
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>gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, complete sequence
          Length = 181654

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atccaagaaatatgatatag 34
             ||||||||||||||||||||
Sbjct: 95899 atccaagaaatatgatatag 95880
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>gb|AC130389.3| Drosophila melanogaster 3 BAC CH221-6A19 (Children's Hospital Oakland
             Research Institute Drosophila melanogaster sheared DNA BAC
             Library) complete sequence
          Length = 108834

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cagttcgatatgatgtatgt 138
             ||||||||||||||||||||
Sbjct: 54875 cagttcgatatgatgtatgt 54856
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>emb|AL122006.11|HSJ730H16 Human DNA sequence from clone RP4-730H16 on chromosome 1p13.1-13.3,
             complete sequence
          Length = 151391

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   ttccagtcttttgttttctc 328
             ||||||||||||||||||||
Sbjct: 48048 ttccagtcttttgttttctc 48067
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>gb|AC105293.2| Drosophila melanogaster 3L BAC RP98-45O17 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 190353

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cagttcgatatgatgtatgt 138
             ||||||||||||||||||||
Sbjct: 41161 cagttcgatatgatgtatgt 41142
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>gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atccaagaaatatgatatag 34
             ||||||||||||||||||||
Sbjct: 95951 atccaagaaatatgatatag 95932
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>gb|AC093501.4| Drosophila melanogaster 3L BAC RP98-48E9 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 173497

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  cagttcgatatgatgtatgt 138
            ||||||||||||||||||||
Sbjct: 8853 cagttcgatatgatgtatgt 8834
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>gb|AC018919.13| Homo sapiens 3 BAC RP11-88P6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166642

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   ggttcttccagtcttttgtt 323
             ||||||||||||||||||||
Sbjct: 97843 ggttcttccagtcttttgtt 97824
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>ref|XM_397260.2| PREDICTED: Apis mellifera similar to GA10703-PA (LOC413821), mRNA
          Length = 2740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 140  gtgttgttcaaacagtaact 159
            ||||||||||||||||||||
Sbjct: 1294 gtgttgttcaaacagtaact 1313
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>emb|BX322555.7| Zebrafish DNA sequence from clone DKEY-19D21 in linkage group 15,
              complete sequence
          Length = 209310

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     tcatgattttgccaaatatg 96
              ||||||||||||||||||||
Sbjct: 193090 tcatgattttgccaaatatg 193109
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 227     tcagcgaaaatggaagattctgctttga 254
               ||||||||||||||||||| ||| ||||
Sbjct: 2951027 tcagcgaaaatggaagattttgccttga 2951054
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>emb|BX469895.7| Zebrafish DNA sequence from clone DKEY-152C18 in linkage group 19,
              complete sequence
          Length = 179493

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tcatgattttgccaaatatg 96
              ||||||||||||||||||||
Sbjct: 116899 tcatgattttgccaaatatg 116880
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>emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 in linkage group 20,
              complete sequence
          Length = 201942

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     tcatgattttgccaaatatg 96
              ||||||||||||||||||||
Sbjct: 181225 tcatgattttgccaaatatg 181244
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>emb|AL121595.5|CNS01DRZ Human chromosome 14 DNA sequence BAC C-3225F7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171535

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   aagattctgctttgaggttt 259
             ||||||||||||||||||||
Sbjct: 76682 aagattctgctttgaggttt 76663
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>gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 of 83 of the complete
             sequence
          Length = 303512

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   cagttcgatatgatgtatgt 138
             ||||||||||||||||||||
Sbjct: 54875 cagttcgatatgatgtatgt 54856
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>dbj|AP000464.2| Homo sapiens genomic DNA, chromosome 11q, clone:P221, complete sequence
          Length = 68582

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gattttgccaaatatggaaa 100
             ||||||||||||||||||||
Sbjct: 64723 gattttgccaaatatggaaa 64742
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>dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-774J1, complete
             sequence
          Length = 167901

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gattttgccaaatatggaaa 100
             ||||||||||||||||||||
Sbjct: 87373 gattttgccaaatatggaaa 87392
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>gb|AE017195.1| Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence
          Length = 208369

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    atccaagaaatatgatatag 34
             ||||||||||||||||||||
Sbjct: 21786 atccaagaaatatgatatag 21805
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>emb|BX005095.6| Zebrafish DNA sequence from clone CH211-189B21, complete sequence
          Length = 138343

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gaatttcatgattttgccaa 91
             ||||||||||||||||||||
Sbjct: 48286 gaatttcatgattttgccaa 48267
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>dbj|AB017652.1| Homo sapiens genomic DNA, chromosome 11q23.2, clone:P221, complete
            sequence
          Length = 68582

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   gattttgccaaatatggaaa 100
            ||||||||||||||||||||
Sbjct: 3860 gattttgccaaatatggaaa 3841
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>gb|AC132328.3| Mus musculus BAC clone RP24-195C6 from 10, complete sequence
          Length = 146064

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    ttgatgatatcaaatcagtt 123
              ||||||||||||||||||||
Sbjct: 106260 ttgatgatatcaaatcagtt 106279


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,329,992
Number of Sequences: 3902068
Number of extensions: 4329992
Number of successful extensions: 79969
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79865
Number of HSP's gapped (non-prelim): 104
length of query: 413
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 391
effective length of database: 17,147,199,772
effective search space: 6704555110852
effective search space used: 6704555110852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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