ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl22c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
2dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA... 74 4e-10
3emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
5gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipie... 44 0.36
6gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, co... 44 0.36
7emb|CR847524.5| Zebrafish DNA sequence from clone DKEY-77M9 in l... 44 0.36
8gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosom... 44 0.36
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
10dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
11gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, compl... 44 0.36
12emb|BX088721.5| Zebrafish DNA sequence from clone DKEY-14M2 in l... 44 0.36
13gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, com... 42 1.4
14ref|NM_191533.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
15gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, com... 42 1.4
16emb|AL513479.12| Human DNA sequence from clone RP11-329N22 on ch... 42 1.4
17gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.4
18gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, com... 42 1.4
19dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete... 42 1.4
21dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.4
22dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23ref|XM_314279.2| Anopheles gambiae str. PEST ENSANGP00000018670 ... 42 1.4
24ref|XM_311658.2| Anopheles gambiae str. PEST ENSANGP00000014931 ... 42 1.4
25gb|AC130536.4| Mus musculus BAC clone RP23-369M17 from 13, compl... 42 1.4
26emb|CT486008.9| Mouse DNA sequence from clone RP24-112G3 on chro... 42 1.4
27gb|AC131187.4| Mus musculus BAC clone RP24-250M7 from 13, comple... 42 1.4
28gb|BC056534.1| Danio rerio tissue inhibitor of metalloproteinase... 40 5.7
29ref|XM_521089.1| PREDICTED: Pan troglodytes similar to C-1-tetra... 40 5.7
30ref|XM_465731.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
31ref|XM_464325.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
32ref|XM_450190.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
33ref|XM_471783.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
34ref|XM_416060.1| PREDICTED: Gallus gallus similar to protein pho... 40 5.7
35gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.7
36ref|XM_854820.1| PREDICTED: Canis familiaris similar to zinc fin... 40 5.7
37ref|XM_538605.2| PREDICTED: Canis familiaris similar to zinc fin... 40 5.7
38emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 i... 40 5.7
39ref|XM_844526.1| PREDICTED: Canis familiaris similar to EEA1 (Ea... 40 5.7
40gb|AC115752.8| Mus musculus chromosome 19, clone RP23-18M16, com... 40 5.7
41ref|XM_505514.1| Yarrowia lipolytica CLIB122, YALI0F16940g predi... 40 5.7
42emb|BX021318.1|CNS08OM2 Single read from an extremity of a full-... 40 5.7
43emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
44gb|AC008759.9| Homo sapiens chromosome 19 clone CTD-3116E22, com... 40 5.7
45dbj|AK122974.1| Homo sapiens cDNA FLJ16721 fis, clone UTERU30016... 40 5.7
46gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, compl... 40 5.7
47dbj|AK146782.1| Mus musculus 17 days embryo heart cDNA, RIKEN fu... 40 5.7
48dbj|AK153406.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.7
49dbj|AK151170.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.7
50emb|BX248308.11| Zebrafish DNA sequence from clone DKEY-247M21 i... 40 5.7
51ref|NM_001029162.2| Caenorhabditis elegans C02C6.2a (C02C6.2) mR... 40 5.7
52gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 5.7
53dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
54dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
55gb|AE004958.1| Pseudomonas aeruginosa PAO1, section 519 of 529 o... 40 5.7
56gb|AE004476.1| Pseudomonas aeruginosa PAO1, section 37 of 529 of... 40 5.7
57gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR c... 40 5.7
58dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
59dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
60dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
61dbj|AK120695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
62ref|XM_315491.2| Anopheles gambiae str. PEST ENSANGP00000021218 ... 40 5.7
63dbj|AK109723.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
64dbj|AK072013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
65emb|AL840629.24| Mouse DNA sequence from clone RP23-334A5 on chr... 40 5.7
66dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
67emb|Z79596.1|CEC02C6 Caenorhabditis elegans Cosmid C02C6, comple... 40 5.7
68emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 5.7
69dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.7
70emb|AL645974.7| Mouse DNA sequence from clone RP23-249M13 on chr... 40 5.7 
>dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D01, full
           insert sequence
          Length = 2343

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 92/110 (83%), Gaps = 9/110 (8%)
 Strand = Plus / Plus

                                                                       
Query: 250 atgatgatcccggcgaggcacatgccgtcgtcgatgatcggccggagcagcggcggcgcg 309
           |||||||||||||||||||| |||||||||   ||||||||||||| |      ||||| 
Sbjct: 495 atgatgatcccggcgaggcatatgccgtcg---atgatcggccggaac------ggcgca 545

                                                             
Query: 310 ccctacggatcctcatcagcactgtcgctcggccagccaaacctgctgga 359
            | |||||||||||||| |||||||| ||| ||||||||||| |||||||
Sbjct: 546 gcgtacggatcctcatcggcactgtcactcagccagccaaacttgctgga 595



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 52  gttgcgtggcaagcaagatatatata 77
           ||||| ||||||||||||||||||||
Sbjct: 306 gttgcttggcaagcaagatatatata 331
to top
>dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA for GL2-type
           homeodomain protein, complete cds
          Length = 3063

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 92/110 (83%), Gaps = 9/110 (8%)
 Strand = Plus / Plus

                                                                       
Query: 250 atgatgatcccggcgaggcacatgccgtcgtcgatgatcggccggagcagcggcggcgcg 309
           |||||||||||||||||||| |||||||||   ||||||||||||| |      ||||| 
Sbjct: 257 atgatgatcccggcgaggcatatgccgtcg---atgatcggccggaac------ggcgca 307

                                                             
Query: 310 ccctacggatcctcatcagcactgtcgctcggccagccaaacctgctgga 359
            | |||||||||||||| |||||||| ||| ||||||||||| |||||||
Sbjct: 308 gcgtacggatcctcatcggcactgtcactcagccagccaaacttgctgga 357



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 52 gttgcgtggcaagcaagatatatata 77
          ||||| ||||||||||||||||||||
Sbjct: 68 gttgcttggcaagcaagatatatata 93
to top
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
              complete sequence
          Length = 166951

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 42/46 (91%), Gaps = 3/46 (6%)
 Strand = Plus / Minus

                                                            
Query: 250    atgatgatcccggcgaggcacatgccgtcgtcgatgatcggccgga 295
              |||||||||||||||||||| ||||   ||||||||||||||||||
Sbjct: 113372 atgatgatcccggcgaggcatatgc---cgtcgatgatcggccgga 113330



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 52     gttgcgtggcaagcaagatatatata 77
              ||||| ||||||||||||||||||||
Sbjct: 113561 gttgcttggcaagcaagatatatata 113536
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 42/46 (91%), Gaps = 3/46 (6%)
 Strand = Plus / Minus

                                                              
Query: 250      atgatgatcccggcgaggcacatgccgtcgtcgatgatcggccgga 295
                |||||||||||||||||||| ||||   ||||||||||||||||||
Sbjct: 31940506 atgatgatcccggcgaggcatatgc---cgtcgatgatcggccgga 31940464



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 52       gttgcgtggcaagcaagatatatata 77
                ||||| ||||||||||||||||||||
Sbjct: 31940695 gttgcttggcaagcaagatatatata 31940670



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 403      atcccggtgcgcgcggcgga 422
                ||||||||||||||||||||
Sbjct: 14239265 atcccggtgcgcgcggcgga 14239284
to top
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940117D9, complete sequence
          Length = 143368

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 277  tcgtcgatgatcggccggagcagcgg 302
            |||||||||||| |||||||||||||
Sbjct: 8137 tcgtcgatgatctgccggagcagcgg 8162
to top
>gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, complete sequence
          Length = 172228

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 136   agagatgcagatgtgtgtgtga 157
             ||||||||||||||||||||||
Sbjct: 34198 agagatgcagatgtgtgtgtga 34177
to top
>emb|CR847524.5| Zebrafish DNA sequence from clone DKEY-77M9 in linkage group 14,
             complete sequence
          Length = 149148

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 31    agatctgctgctgctcgtgctg 52
             ||||||||||||||||||||||
Sbjct: 51879 agatctgctgctgctcgtgctg 51858
to top
>gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosome 5, complete
           sequence
          Length = 184560

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 136 agagatgcagatgtgtgtgtga 157
           ||||||||||||||||||||||
Sbjct: 278 agagatgcagatgtgtgtgtga 299
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 34      tctgctgctgctcgtgctgttg 55
               ||||||||||||||||||||||
Sbjct: 1868877 tctgctgctgctcgtgctgttg 1868856
to top
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0001H02
          Length = 147160

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 34    tctgctgctgctcgtgctgttg 55
             ||||||||||||||||||||||
Sbjct: 69355 tctgctgctgctcgtgctgttg 69334
to top
>gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, complete sequence
          Length = 182420

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 74    tatacccctctctccatatata 95
             ||||||||||||||||||||||
Sbjct: 35521 tatacccctctctccatatata 35542
to top
>emb|BX088721.5| Zebrafish DNA sequence from clone DKEY-14M2 in linkage group 14, complete
              sequence
          Length = 231054

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 31     agatctgctgctgctcgtgctg 52
              ||||||||||||||||||||||
Sbjct: 109893 agatctgctgctgctcgtgctg 109872
to top
>gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, complete sequence
          Length = 158043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 147   tgtgtgtgtgaagaaatggaa 167
             |||||||||||||||||||||
Sbjct: 44498 tgtgtgtgtgaagaaatggaa 44478
to top
>ref|NM_191533.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 840

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 289 ggccggagcagcggcggcgcg 309
           |||||||||||||||||||||
Sbjct: 465 ggccggagcagcggcggcgcg 445
to top
>gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, complete sequence
          Length = 226006

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 147  tgtgtgtgtgaagaaatggaa 167
            |||||||||||||||||||||
Sbjct: 3955 tgtgtgtgtgaagaaatggaa 3935
to top
>emb|AL513479.12| Human DNA sequence from clone RP11-329N22 on chromosome 1, complete
             sequence
          Length = 193826

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 374   gcctcctgcagcaccacctcc 394
             |||||||||||||||||||||
Sbjct: 32465 gcctcctgcagcaccacctcc 32445
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 36      tgctgctgctcgtgctgttgc 56
               |||||||||||||||||||||
Sbjct: 3207361 tgctgctgctcgtgctgttgc 3207341
to top
>gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, complete sequence
          Length = 196977

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 147  tgtgtgtgtgaagaaatggaa 167
            |||||||||||||||||||||
Sbjct: 8712 tgtgtgtgtgaagaaatggaa 8732
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 289      ggccggagcagcggcggcgcg 309
                |||||||||||||||||||||
Sbjct: 33318286 ggccggagcagcggcggcgcg 33318266
to top
>gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete sequence
          Length = 182627

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 67    agatatatatacccctctctccatatata 95
             |||||||||||| |||||||| |||||||
Sbjct: 99617 agatatatatacacctctctctatatata 99589
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 260     cggcgaggcacatgccgtcgt 280
               |||||||||||||||||||||
Sbjct: 1437005 cggcgaggcacatgccgtcgt 1437025
to top
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1070A12
          Length = 148449

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 289    ggccggagcagcggcggcgcg 309
              |||||||||||||||||||||
Sbjct: 111533 ggccggagcagcggcggcgcg 111513
to top
>ref|XM_314279.2| Anopheles gambiae str. PEST ENSANGP00000018670
           (ENSANGG00000016181), partial mRNA
          Length = 576

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 381 gcagcaccacctcctggagca 401
           |||||||||||||||||||||
Sbjct: 164 gcagcaccacctcctggagca 184
to top
>ref|XM_311658.2| Anopheles gambiae str. PEST ENSANGP00000014931
           (ENSANGG00000012442), partial mRNA
          Length = 585

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 381 gcagcaccacctcctggagca 401
           |||||||||||||||||||||
Sbjct: 173 gcagcaccacctcctggagca 193
to top
>gb|AC130536.4| Mus musculus BAC clone RP23-369M17 from 13, complete sequence
          Length = 188021

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   agatgcagatgtgtgtgtgaa 158
             |||||||||||||||||||||
Sbjct: 10334 agatgcagatgtgtgtgtgaa 10314
to top
>emb|CT486008.9| Mouse DNA sequence from clone RP24-112G3 on chromosome 17, complete
             sequence
          Length = 129106

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 145   gatgtgtgtgtgaagaaatggaagg 169
             |||||||||||||||||||| ||||
Sbjct: 24942 gatgtgtgtgtgaagaaatgcaagg 24918
to top
>gb|AC131187.4| Mus musculus BAC clone RP24-250M7 from 13, complete sequence
          Length = 159288

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    agatgcagatgtgtgtgtgaa 158
              |||||||||||||||||||||
Sbjct: 128679 agatgcagatgtgtgtgtgaa 128659
to top
>gb|BC056534.1| Danio rerio tissue inhibitor of metalloproteinase 2, like, mRNA
           (cDNA clone MGC:65967 IMAGE:6791963), complete cds
          Length = 1899

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  tctgctgctgctcgtgctgt 53
           ||||||||||||||||||||
Sbjct: 123 tctgctgctgctcgtgctgt 142
to top
>ref|XM_521089.1| PREDICTED: Pan troglodytes similar to C-1-tetrahydrofolate
           synthase, cytoplasmic (C1-THF synthase) (LOC465665),
           mRNA
          Length = 1154

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 373 cgcctcctgcagcaccacct 392
           ||||||||||||||||||||
Sbjct: 406 cgcctcctgcagcaccacct 387
to top
>ref|XM_465731.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 591

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 cggccggagcagcggcggcg 307
           ||||||||||||||||||||
Sbjct: 240 cggccggagcagcggcggcg 259
to top
>ref|XM_464325.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1266

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 cggagcagcggcggcgcgcc 311
           ||||||||||||||||||||
Sbjct: 860 cggagcagcggcggcgcgcc 841
to top
>ref|XM_450190.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1314

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 gcagcaccacctcctggagc 400
           ||||||||||||||||||||
Sbjct: 397 gcagcaccacctcctggagc 378
to top
>ref|XM_471783.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1509

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 atcccggtgcgcgcggcgga 422
           ||||||||||||||||||||
Sbjct: 864 atcccggtgcgcgcggcgga 845
to top
>ref|XM_416060.1| PREDICTED: Gallus gallus similar to protein phosphatase 1H (PP2C
           domain containing) (LOC417819), mRNA
          Length = 4480

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 379 ctgcagcaccacctcctggagcag 402
           |||||||||||| |||||||||||
Sbjct: 635 ctgcagcaccacatcctggagcag 658
to top
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940128D9, complete sequence
          Length = 128585

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    ctgctgctgctcgtgctgtt 54
             ||||||||||||||||||||
Sbjct: 29660 ctgctgctgctcgtgctgtt 29641
to top
>ref|XM_854820.1| PREDICTED: Canis familiaris similar to zinc finger protein 608,
           transcript variant 2 (LOC481484), mRNA
          Length = 6033

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  tgctgctgctcgtgctgttg 55
           ||||||||||||||||||||
Sbjct: 682 tgctgctgctcgtgctgttg 663
to top
>ref|XM_538605.2| PREDICTED: Canis familiaris similar to zinc finger protein 608,
           transcript variant 1 (LOC481484), mRNA
          Length = 6002

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  tgctgctgctcgtgctgttg 55
           ||||||||||||||||||||
Sbjct: 651 tgctgctgctcgtgctgttg 632
to top
>emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 in linkage group 9,
              complete sequence
          Length = 210207

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    tgtactacaccatctttgtt 122
              ||||||||||||||||||||
Sbjct: 114370 tgtactacaccatctttgtt 114351
to top
>ref|XM_844526.1| PREDICTED: Canis familiaris similar to EEA1 (Early Endosome Antigen,
            Rab effector) homolog family member (eea-1) (LOC607741),
            mRNA
          Length = 4722

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 378  cctgcagcaccacctcctgg 397
            ||||||||||||||||||||
Sbjct: 1513 cctgcagcaccacctcctgg 1494
to top
>gb|AC115752.8| Mus musculus chromosome 19, clone RP23-18M16, complete sequence
          Length = 214925

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    cggccggagcagcggcggcg 307
              ||||||||||||||||||||
Sbjct: 137427 cggccggagcagcggcggcg 137446
to top
>ref|XM_505514.1| Yarrowia lipolytica CLIB122, YALI0F16940g predicted mRNA
          Length = 4749

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 371  agcgcctcctgcagcaccacctcctggagcag 402
            ||||||||||||||| |||||| ||| |||||
Sbjct: 1314 agcgcctcctgcagctccacctgctgtagcag 1283
to top
>emb|BX021318.1|CNS08OM2 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA31CD12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 691

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 ggggaaggagagagatgcag 145
           ||||||||||||||||||||
Sbjct: 226 ggggaaggagagagatgcag 207
to top
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09,
             complete sequence
          Length = 146506

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   atcccggtgcgcgcggcgga 422
             ||||||||||||||||||||
Sbjct: 77030 atcccggtgcgcgcggcgga 77049
to top
>gb|AC008759.9| Homo sapiens chromosome 19 clone CTD-3116E22, complete sequence
          Length = 206395

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   ggaggggaaggagagagatg 142
             ||||||||||||||||||||
Sbjct: 60977 ggaggggaaggagagagatg 60996
to top
>dbj|AK122974.1| Homo sapiens cDNA FLJ16721 fis, clone UTERU3001632, weakly  similar
            to Homo sapiens zinc finger protein 135 (clone pHZ-17)
            (ZNF135)
          Length = 4409

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  ggaggggaaggagagagatg 142
            ||||||||||||||||||||
Sbjct: 3505 ggaggggaaggagagagatg 3486
to top
>gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, complete sequence
          Length = 174372

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 132   ggagagagatgcagatgtgtgtgt 155
             |||||||||| |||||||||||||
Sbjct: 53868 ggagagagatccagatgtgtgtgt 53891
to top
>dbj|AK146782.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:I920054O10 product:MOB protein homolog
           [Rattus norvegicus], full insert sequence
          Length = 3606

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 cggccggagcagcggcggcg 307
           ||||||||||||||||||||
Sbjct: 30  cggccggagcagcggcggcg 49
to top
>dbj|AK153406.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830155M21 product:Mob protein
           homolog [Homo sapiens], full insert sequence
          Length = 2176

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 cggccggagcagcggcggcg 307
           ||||||||||||||||||||
Sbjct: 15  cggccggagcagcggcggcg 34
to top
>dbj|AK151170.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830026F10 product:Mob protein
           homolog [Homo sapiens], full insert sequence
          Length = 2176

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 cggccggagcagcggcggcg 307
           ||||||||||||||||||||
Sbjct: 15  cggccggagcagcggcggcg 34
to top
>emb|BX248308.11| Zebrafish DNA sequence from clone DKEY-247M21 in linkage group 21,
             complete sequence
          Length = 171606

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gagatgcagatgtgtgtgtg 156
             ||||||||||||||||||||
Sbjct: 50526 gagatgcagatgtgtgtgtg 50507
to top
>ref|NM_001029162.2| Caenorhabditis elegans C02C6.2a (C02C6.2) mRNA, complete cds
          Length = 2508

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  atgcagatgtgtgtgtgaag 159
            ||||||||||||||||||||
Sbjct: 1902 atgcagatgtgtgtgtgaag 1883
to top
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    tgatcggccggagcagcggc 303
              ||||||||||||||||||||
Sbjct: 549958 tgatcggccggagcagcggc 549977
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 381      gcagcaccacctcctggagc 400
                ||||||||||||||||||||
Sbjct: 21149734 gcagcaccacctcctggagc 21149715
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 288      cggccggagcagcggcggcg 307
                ||||||||||||||||||||
Sbjct: 17080320 cggccggagcagcggcggcg 17080301



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 292     cggagcagcggcggcgcgcc 311
               ||||||||||||||||||||
Sbjct: 4483061 cggagcagcggcggcgcgcc 4483042
to top
>gb|AE004958.1| Pseudomonas aeruginosa PAO1, section 519 of 529 of the complete genome
          Length = 15773

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 352   ctgctggacggcagcaaccagcgc 375
             ||||||||||||| ||||||||||
Sbjct: 13795 ctgctggacggcatcaaccagcgc 13818
to top
>gb|AE004476.1| Pseudomonas aeruginosa PAO1, section 37 of 529 of the complete genome
          Length = 11930

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 366  caaccagcgcctcctgcagcacca 389
            |||||||||||| |||||||||||
Sbjct: 8004 caaccagcgcctgctgcagcacca 7981
to top
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
             putative defense response protein, and putative alliin
             lyase genes, complete cds; and unknown genes
          Length = 106618

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   ttagctatattggctagcagcaag 229
             ||||||||||||||||| ||||||
Sbjct: 60365 ttagctatattggctaggagcaag 60388
to top
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0483C08
          Length = 143855

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   cggccggagcagcggcggcg 307
             ||||||||||||||||||||
Sbjct: 61693 cggccggagcagcggcggcg 61674
to top
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0677G01
          Length = 137031

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    cggccggagcagcggcggcg 307
              ||||||||||||||||||||
Sbjct: 131576 cggccggagcagcggcggcg 131557
to top
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1297_C09
          Length = 163378

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   cggagcagcggcggcgcgcc 311
             ||||||||||||||||||||
Sbjct: 18440 cggagcagcggcggcgcgcc 18421
to top
>dbj|AK120695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170G11, full
           insert sequence
          Length = 1727

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 atcccggtgcgcgcggcgga 422
           ||||||||||||||||||||
Sbjct: 892 atcccggtgcgcgcggcgga 873
to top
>ref|XM_315491.2| Anopheles gambiae str. PEST ENSANGP00000021218 (ENSANGG00000018729),
            partial mRNA
          Length = 3450

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   atctgctgctgctcgtgctg 52
            ||||||||||||||||||||
Sbjct: 3266 atctgctgctgctcgtgctg 3285
to top
>dbj|AK109723.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-B05, full
           insert sequence
          Length = 2057

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 gcagcaccacctcctggagc 400
           ||||||||||||||||||||
Sbjct: 544 gcagcaccacctcctggagc 525
to top
>dbj|AK072013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104K15, full
           insert sequence
          Length = 1418

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 gcagcaccacctcctggagc 400
           ||||||||||||||||||||
Sbjct: 417 gcagcaccacctcctggagc 398
to top
>emb|AL840629.24| Mouse DNA sequence from clone RP23-334A5 on chromosome 4, complete
              sequence
          Length = 214140

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    gtgtgtgtgaagaaatggaa 167
              ||||||||||||||||||||
Sbjct: 189383 gtgtgtgtgaagaaatggaa 189364
to top
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0705E11
          Length = 140729

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   gcagcaccacctcctggagc 400
             ||||||||||||||||||||
Sbjct: 20491 gcagcaccacctcctggagc 20472
to top
>emb|Z79596.1|CEC02C6 Caenorhabditis elegans Cosmid C02C6, complete sequence
          Length = 43379

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   atgcagatgtgtgtgtgaag 159
             ||||||||||||||||||||
Sbjct: 11580 atgcagatgtgtgtgtgaag 11561
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 371     agcgcctcctgcagcaccacctcctggagcag 402
               ||||||||||||||| |||||| ||| |||||
Sbjct: 2279380 agcgcctcctgcagctccacctgctgtagcag 2279411
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 374     gcctcctgcagcaccacctc 393
               ||||||||||||||||||||
Sbjct: 2551930 gcctcctgcagcaccacctc 2551949
to top
>emb|AL645974.7| Mouse DNA sequence from clone RP23-249M13 on chromosome 11, complete
             sequence
          Length = 136134

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    tctgctgctgctcgtgctgt 53
             ||||||||||||||||||||
Sbjct: 35819 tctgctgctgctcgtgctgt 35838


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,200,090
Number of Sequences: 3902068
Number of extensions: 5200090
Number of successful extensions: 111640
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110854
Number of HSP's gapped (non-prelim): 782
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top