ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl22b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide N-a... 60 3e-09
2OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide N-acetylglu... 36 0.040
3PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 32 0.58
4GLGA_RALSO (Q8XT73) Glycogen synthase (EC 2.4.1.21) (Starch [bac... 30 2.9
5PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane ... 30 3.8
6ITS3_SCHPO (O13853) Phosphatidylinositol-4-phosphate 5-kinase it... 29 6.4
7DAB2_MOUSE (P98078) Disabled homolog 2 (DOC-2) (Mitogen-responsi... 28 8.4
8OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide N-acetylglu... 28 8.4
9BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2 28 8.4
10OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide N-acetylgluco... 28 8.4

>SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SEC (EC 2.4.1.-)
           (Protein SECRET AGENT)
          Length = 977

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +2

Query: 329 NEEDHLALAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 454
           +++  LALAHQ YK G + QALEH N VY++NP RTDNLLL+
Sbjct: 52  DDDARLALAHQLYKGGDFKQALEHSNMVYQRNPLRTDNLLLI 93



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>OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc)
           (OGT)
          Length = 1151

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 21/57 (36%), Positives = 32/57 (56%)
 Frame = +2

Query: 284 PPVSLDARSKQLVGVNEEDHLALAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 454
           P V L+  S+ L  V E     LAH+ ++SG Y +A ++ N V++ +P     LLLL
Sbjct: 114 PTVVLNGVSETLKKVTE-----LAHRQFQSGNYVEAEKYCNLVFQSDPNNLPTLLLL 165



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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 22  IPASGEAPSFITALSPPPQNLSRPREISGPRWSRPPDLGFPRDA 153
           +P +G  P  +  +   P+N   P+  +GP +  PP  GFPR+A
Sbjct: 450 VPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQGGFPRNA 493



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>GLGA_RALSO (Q8XT73) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase)
          Length = 541

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -1

Query: 259 WPLGS--RPRAAADTEPYVVPAAHRRRRQVACVTTQREH 149
           WP+ +  RP +  DT P   PA  RRRR  A  TT R H
Sbjct: 492 WPMRTLARPASPPDTAPVGKPA--RRRRTTALSTTARAH 528



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>PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane intrinsic|
           protein 2.8) (OsPIP2.8)
          Length = 280

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 45  VVHHSTLPSSPKPLAPARDFGPALV*ATGS 134
           VVH +T+P +   + PAR  GPALV   G+
Sbjct: 204 VVHLATIPITGTGINPARSLGPALVLGLGT 233



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>ITS3_SCHPO (O13853) Phosphatidylinositol-4-phosphate 5-kinase its3 (EC|
           2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase)
           (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide
           kinase)
          Length = 742

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +1

Query: 10  RNSPIPASGEAPSFITALSPPPQNLSRPREISGPRWSRPP 129
           R+SPI ++ E PS  ++ SP  QNL    ++S P+ SR P
Sbjct: 118 RDSPIVSALEPPSSNSSSSPQLQNLK--HQLSSPQPSRAP 155



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>DAB2_MOUSE (P98078) Disabled homolog 2 (DOC-2) (Mitogen-responsive|
           phosphoprotein)
          Length = 766

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 37  EAPSFITALSPPPQNLSRPREISGPR-WSRPPDLGFP 144
           ++PSF T  SPPP  +  P     P  WS    LG P
Sbjct: 552 QSPSFATPASPPPPTVWCPTTSVAPNAWSSTSPLGNP 588



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>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1046

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 350 LAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 454
           LAH+ Y++G +  A  H   ++ + P  T  LLLL
Sbjct: 27  LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLL 61



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>BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2|
          Length = 803

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 12/58 (20%)
 Frame = +2

Query: 284 PPVSLDARSKQLVGVNEEDHLALA------------HQSYKSGKYSQALEHGNAVYEK 421
           PP SL+A++ +L  +  E    +             HQS K GK S+ L+H N + ++
Sbjct: 302 PPGSLEAKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKE 359



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>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1036

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 350 LAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 454
           LAH+ Y++G +  A  H   ++ + P  T  LLLL
Sbjct: 17  LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLL 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,186,372
Number of Sequences: 219361
Number of extensions: 1161759
Number of successful extensions: 4654
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4629
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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