Clone Name | bastl22b09 |
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Clone Library Name | barley_pub |
>SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SEC (EC 2.4.1.-) (Protein SECRET AGENT) Length = 977 Score = 59.7 bits (143), Expect = 3e-09 Identities = 26/42 (61%), Positives = 33/42 (78%) Frame = +2 Query: 329 NEEDHLALAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 454 +++ LALAHQ YK G + QALEH N VY++NP RTDNLLL+ Sbjct: 52 DDDARLALAHQLYKGGDFKQALEHSNMVYQRNPLRTDNLLLI 93
>OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc) (OGT) Length = 1151 Score = 36.2 bits (82), Expect = 0.040 Identities = 21/57 (36%), Positives = 32/57 (56%) Frame = +2 Query: 284 PPVSLDARSKQLVGVNEEDHLALAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 454 P V L+ S+ L V E LAH+ ++SG Y +A ++ N V++ +P LLLL Sbjct: 114 PTVVLNGVSETLKKVTE-----LAHRQFQSGNYVEAEKYCNLVFQSDPNNLPTLLLL 165
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 32.3 bits (72), Expect = 0.58 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +1 Query: 22 IPASGEAPSFITALSPPPQNLSRPREISGPRWSRPPDLGFPRDA 153 +P +G P + + P+N P+ +GP + PP GFPR+A Sbjct: 450 VPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQGGFPRNA 493
>GLGA_RALSO (Q8XT73) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 541 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 259 WPLGS--RPRAAADTEPYVVPAAHRRRRQVACVTTQREH 149 WP+ + RP + DT P PA RRRR A TT R H Sbjct: 492 WPMRTLARPASPPDTAPVGKPA--RRRRTTALSTTARAH 528
>PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane intrinsic| protein 2.8) (OsPIP2.8) Length = 280 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 45 VVHHSTLPSSPKPLAPARDFGPALV*ATGS 134 VVH +T+P + + PAR GPALV G+ Sbjct: 204 VVHLATIPITGTGINPARSLGPALVLGLGT 233
>ITS3_SCHPO (O13853) Phosphatidylinositol-4-phosphate 5-kinase its3 (EC| 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) Length = 742 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = +1 Query: 10 RNSPIPASGEAPSFITALSPPPQNLSRPREISGPRWSRPP 129 R+SPI ++ E PS ++ SP QNL ++S P+ SR P Sbjct: 118 RDSPIVSALEPPSSNSSSSPQLQNLK--HQLSSPQPSRAP 155
>DAB2_MOUSE (P98078) Disabled homolog 2 (DOC-2) (Mitogen-responsive| phosphoprotein) Length = 766 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +1 Query: 37 EAPSFITALSPPPQNLSRPREISGPR-WSRPPDLGFP 144 ++PSF T SPPP + P P WS LG P Sbjct: 552 QSPSFATPASPPPPTVWCPTTSVAPNAWSSTSPLGNP 588
>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit) Length = 1046 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 350 LAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 454 LAH+ Y++G + A H ++ + P T LLLL Sbjct: 27 LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLL 61
>BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2| Length = 803 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 12/58 (20%) Frame = +2 Query: 284 PPVSLDARSKQLVGVNEEDHLALA------------HQSYKSGKYSQALEHGNAVYEK 421 PP SL+A++ +L + E + HQS K GK S+ L+H N + ++ Sbjct: 302 PPGSLEAKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKE 359
>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit) Length = 1036 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 350 LAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 454 LAH+ Y++G + A H ++ + P T LLLL Sbjct: 17 LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLL 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,186,372 Number of Sequences: 219361 Number of extensions: 1161759 Number of successful extensions: 4654 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4348 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4629 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)