Clone Information

BLAST Search Result

Clone Name	bastl22b08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AP1B1_MOUSE (O35643) AP-1 complex subunit beta-1 (Adapter-relate...	155	4e-38
2	AP1B1_RAT (P52303) AP-1 complex subunit beta-1 (Adapter-related ...	155	4e-38
3	AP1B1_HUMAN (Q10567) AP-1 complex subunit beta-1 (Adapter-relate...	155	4e-38
4	AP2B1_RAT (P62944) AP-2 complex subunit beta-1 (Adapter-related ...	155	5e-38
5	AP2B1_MOUSE (Q9DBG3) AP-2 complex subunit beta-1 (Adapter-relate...	155	5e-38
6	AP2B1_HUMAN (P63010) AP-2 complex subunit beta-1 (Adapter-relate...	155	5e-38
7	AP2B1_BOVIN (P63009) AP-2 complex subunit beta-1 (Adapter-relate...	114	2e-25
8	AP1B1_SCHPO (O43079) AP-1 complex subunit beta-1 (Beta(1)-adapti...	112	4e-25
9	AP1B1_YEAST (P36000) AP-1 complex subunit beta-1 (Beta(1)-adapti...	100	1e-21
10	AP3B1_CANFA (Q7YRF1) AP-3 complex subunit beta-1 (Adapter-relate...	78	1e-14
11	AP3B1_MOUSE (Q9Z1T1) AP-3 complex subunit beta-1 (Adapter-relate...	77	2e-14
12	AP3B1_HUMAN (O00203) AP-3 complex subunit beta-1 (Adapter-relate...	77	2e-14
13	AP3B2_MOUSE (Q9JME5) AP-3 complex subunit beta-2 (Adapter-relate...	70	2e-12
14	AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-relate...	70	2e-12
15	AP2B_SCHPO (O43005) AP-2 complex subunit beta (Beta-adaptin) (Cl...	67	3e-11
16	AP4B1_HUMAN (Q9Y6B7) AP-4 complex subunit beta-1 (Adapter-relate...	64	3e-10
17	AP3B_SCHPO (O13939) AP-3 complex subunit beta (Beta-adaptin) (Ad...	63	4e-10
18	AP4B1_MOUSE (Q9WV76) AP-4 complex subunit beta-1 (Adapter-relate...	62	6e-10
19	AP3B_ASHGO (Q759E2) AP-3 complex subunit beta (Beta-adaptin) (Ad...	57	2e-08
20	AP3B_YEAST (P46682) AP-3 complex subunit beta (Beta-adaptin) (Ad...	54	2e-07
21	AP3D_DROME (P54362) AP-3 complex subunit delta (Delta-adaptin) (...	37	0.033
22	AP2B_YEAST (P27351) AP-2 complex subunit beta (Beta-adaptin) (Cl...	35	0.13
23	AP3D1_BOVIN (Q865S1) AP-3 complex subunit delta-1 (Adapter-relat...	33	0.28
24	AP3D1_HUMAN (O14617) AP-3 complex subunit delta-1 (Adapter-relat...	33	0.28
25	AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-relat...	33	0.37
26	AP4E1_HUMAN (Q9UPM8) AP-4 complex subunit epsilon-1 (Adapter-rel...	33	0.48
27	AP4E1_MOUSE (Q80V94) AP-4 complex subunit epsilon-1 (Adapter-rel...	33	0.48
28	COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (B...	32	0.63
29	COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (B...	32	0.82
30	ATIN_BHV1P (P30020) Alpha trans-inducing protein (Alpha-TIF)	31	1.4
31	ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (1...	31	1.8
32	ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (1...	31	1.8
33	ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (1...	31	1.8
34	FEN1A_ORYSA (Q9SXQ6) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a)	30	3.1
35	RRF_WIGBR (Q8D2G5) Ribosome recycling factor (Ribosome-releasing...	30	4.1
36	KINH_STRPU (P35978) Kinesin heavy chain	30	4.1
37	KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-as...	29	5.3
38	VCOM_ADEM1 (O10442) Minor core protein (Protein V) (pV)	29	5.3
39	RENBP_PIG (P17560) N-acylglucosamine 2-epimerase (EC 5.1.3.8) (G...	29	5.3
40	RNZ_BRAJA (Q89NF8) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNa...	29	6.9
41	1433_HELAN (O65352) 14-3-3-like protein	29	6.9
42	KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-as...	29	6.9
43	ROCK1_RABIT (O77819) Rho-associated protein kinase 1 (EC 2.7.11....	28	9.1
44	ROCK1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.11....	28	9.1
45	DPOLA_ORYSA (O48653) DNA polymerase alpha catalytic subunit (EC ...	28	9.1
46	TARSH_HUMAN (Q7Z7G0) Target of Nesh-SH3 precursor (Tarsh) (Nesh-...	28	9.1
47	ROCK1_BOVIN (Q8MIT6) Rho-associated protein kinase 1 (EC 2.7.11....	28	9.1
48	ROCK1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.11....	28	9.1
49	NOLA1_HUMAN (Q9NY12) H/ACA ribonucleoprotein complex subunit 1 (...	28	9.1
50	LEA2_CICAR (O49817) Late embryogenesis abundant protein 2 (CapLE...	28	9.1
51	KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-as...	28	9.1
52	ATRIP_DROME (Q9VVN4) ATR-interacting protein mus304 (Mutagen-sen...	28	9.1
53	NELFA_HUMAN (Q9H3P2) Negative elongation factor A (NELF-A) (Wolf...	28	9.1
54	MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia p...	28	9.1

>AP1B1_MOUSE (O35643) AP-1 complex subunit beta-1 (Adapter-related protein|
           complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor
           protein complex AP-1 beta-1 subunit) (Golgi adaptor
           HA1/AP1 adaptin beta subunit) (Clathrin assembly protein
           complex 1 beta larg
          Length = 943

 Score =  155 bits (393), Expect = 4e-38
 Identities = 77/92 (83%), Positives = 87/92 (94%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           DSKYF+TTKKGEI ELK ELNS  K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N
Sbjct: 3   DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
           LELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD
Sbjct: 63  LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKD 94

to top

>AP1B1_RAT (P52303) AP-1 complex subunit beta-1 (Adapter-related protein|
           complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor
           protein complex AP-1 beta-1 subunit) (Golgi adaptor
           HA1/AP1 adaptin beta subunit) (Clathrin assembly protein
           complex 1 beta large
          Length = 949

 Score =  155 bits (393), Expect = 4e-38
 Identities = 77/92 (83%), Positives = 87/92 (94%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           DSKYF+TTKKGEI ELK ELNS  K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N
Sbjct: 3   DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
           LELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD
Sbjct: 63  LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKD 94

to top

>AP1B1_HUMAN (Q10567) AP-1 complex subunit beta-1 (Adapter-related protein|
           complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor
           protein complex AP-1 beta-1 subunit) (Golgi adaptor
           HA1/AP1 adaptin beta subunit) (Clathrin assembly protein
           complex 1 beta larg
          Length = 949

 Score =  155 bits (393), Expect = 4e-38
 Identities = 77/92 (83%), Positives = 87/92 (94%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           DSKYF+TTKKGEI ELK ELNS  K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N
Sbjct: 3   DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
           LELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD
Sbjct: 63  LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKD 94

to top

>AP2B1_RAT (P62944) AP-2 complex subunit beta-1 (Adapter-related protein|
           complex 2 beta-1 subunit) (Beta-adaptin) (Plasma
           membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin
           assembly protein complex 2 beta large chain) (AP105B)
          Length = 937

 Score =  155 bits (392), Expect = 5e-38
 Identities = 77/92 (83%), Positives = 87/92 (94%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N
Sbjct: 3   DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
           LELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD
Sbjct: 63  LELKKLVYLYLMNYAKSQPDMAIMAVNSFVKD 94

to top

>AP2B1_MOUSE (Q9DBG3) AP-2 complex subunit beta-1 (Adapter-related protein|
           complex 2 beta-1 subunit) (Beta-adaptin) (Plasma
           membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin
           assembly protein complex 2 beta large chain) (AP105B)
          Length = 937

 Score =  155 bits (392), Expect = 5e-38
 Identities = 77/92 (83%), Positives = 87/92 (94%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N
Sbjct: 3   DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
           LELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD
Sbjct: 63  LELKKLVYLYLMNYAKSQPDMAIMAVNSFVKD 94

to top

>AP2B1_HUMAN (P63010) AP-2 complex subunit beta-1 (Adapter-related protein|
           complex 2 beta-1 subunit) (Beta-adaptin) (Plasma
           membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin
           assembly protein complex 2 beta large chain) (AP105B)
          Length = 937

 Score =  155 bits (392), Expect = 5e-38
 Identities = 77/92 (83%), Positives = 87/92 (94%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N
Sbjct: 3   DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
           LELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD
Sbjct: 63  LELKKLVYLYLMNYAKSQPDMAIMAVNSFVKD 94

to top

>AP2B1_BOVIN (P63009) AP-2 complex subunit beta-1 (Adapter-related protein|
           complex 2 beta-1 subunit) (Beta-adaptin) (Plasma
           membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin
           assembly protein complex 2 beta large chain) (AP105B)
           (Fragment)
          Length = 236

 Score =  114 bits (284), Expect = 2e-25
 Identities = 56/62 (90%), Positives = 61/62 (98%)
 Frame = +1

Query: 286 AVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFV 465
           AVKKVIAAMTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FV
Sbjct: 1   AVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFV 60

Query: 466 KD 471
           KD
Sbjct: 61  KD 62

to top

>AP1B1_SCHPO (O43079) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin|
           assembly protein large beta-1 chain) (Clathrin assembly
           protein complex 1 beta-1 large chain)
          Length = 683

 Score =  112 bits (281), Expect = 4e-25
 Identities = 60/91 (65%), Positives = 69/91 (75%)
 Frame = +1

Query: 199 SKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENL 378
           S  F   KK E  EL++ L SQY  +R DAVK+ IAAMTVGKDVSSLF DV+  + T ++
Sbjct: 8   SSRFKAFKKSETSELQKGLVSQYAYERIDAVKRTIAAMTVGKDVSSLFPDVLKNLATRDI 67

Query: 379 ELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
            LKKLVYLYLINYAK+ PDL ILAVNTFVKD
Sbjct: 68  TLKKLVYLYLINYAKTHPDLCILAVNTFVKD 98

to top

>AP1B1_YEAST (P36000) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin|
           assembly protein large beta-1 chain) (Clathrin assembly
           protein complex 1 beta-1 large chain)
          Length = 726

 Score =  100 bits (250), Expect = 1e-21
 Identities = 50/83 (60%), Positives = 64/83 (77%)
 Frame = +1

Query: 223 KGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYL 402
           KGE+ EL+  L SQY   RKDA+KK I  MT+GKDVSSLF DV+  + T ++E KKLVYL
Sbjct: 25  KGELSELRTGLVSQYPQTRKDAIKKTIQQMTLGKDVSSLFPDVLKNIATIDVEQKKLVYL 84

Query: 403 YLINYAKSQPDLAILAVNTFVKD 471
           Y++NYA++ P+L ILAVNTF+ D
Sbjct: 85  YVMNYAETHPELCILAVNTFITD 107

to top

>AP3B1_CANFA (Q7YRF1) AP-3 complex subunit beta-1 (Adapter-related protein|
           complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor
           protein complex AP-3 beta-1 subunit) (Clathrin assembly
           protein complex 3 beta-1 large chain)
          Length = 1091

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = +1

Query: 133 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 309
           AGGG+    G+ A      SG    + S  KK E  +LK+ L S     + DA+K+++  
Sbjct: 12  AGGGEATELGQEATSTVSPSGAFGLFSSDLKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69

Query: 310 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTF 462
           +  GK+ S LF  VV  + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF
Sbjct: 70  IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTF 120

to top

>AP3B1_MOUSE (Q9Z1T1) AP-3 complex subunit beta-1 (Adapter-related protein|
           complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor
           protein complex AP-3 beta-1 subunit) (Clathrin assembly
           protein complex 3 beta-1 large chain)
          Length = 1105

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = +1

Query: 133 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 309
           +GGG+    G+ A      SG    + S  KK E  +LK+ L S     + DA+K+++  
Sbjct: 12  SGGGEAAELGQEATSTISPSGAFGLFSSDWKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69

Query: 310 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTF 462
           +  GK+ S LF  VV  + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF
Sbjct: 70  IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTF 120

to top

>AP3B1_HUMAN (O00203) AP-3 complex subunit beta-1 (Adapter-related protein|
           complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor
           protein complex AP-3 beta-1 subunit) (Clathrin assembly
           protein complex 3 beta-1 large chain)
          Length = 1094

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = +1

Query: 133 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 309
           +GGG+    G+ A      SG    + S  KK E  +LK+ L S     + DA+K+++  
Sbjct: 12  SGGGEATELGQEATSTISPSGAFGLFSSDLKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69

Query: 310 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTF 462
           +  GK+ S LF  VV  + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF
Sbjct: 70  IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTF 120

to top

>AP3B2_MOUSE (Q9JME5) AP-3 complex subunit beta-2 (Adapter-related protein|
           complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor
           protein complex AP-3 beta-2 subunit) (Clathrin assembly
           protein complex 3 beta-2 large chain)
          Length = 1082

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
 Frame = +1

Query: 190 GHDSK---YFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 360
           GHD      FS+  K    +LKE L++     + +A+K+++A +  GK+ S LF  VV  
Sbjct: 23  GHDPASGGIFSSDYKRH-DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKN 81

Query: 361 MQTENLELKKLVYLYLINYAKSQPDLAILAVNTF 462
           +  +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF
Sbjct: 82  VACKNIEVKKLVYVYLVRYAEEQQDLALLSISTF 115

to top

>AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-related protein|
           complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor
           protein complex AP-3 beta-2 subunit) (AP-3 complex
           beta-2 subunit) (Clathrin assembly protein complex 3
           beta-2 large chain) (Neu
          Length = 1082

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
 Frame = +1

Query: 190 GHDSK---YFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 360
           GHD      FS+  K    +LKE L++     + +A+K+++A +  GK+ S LF  VV  
Sbjct: 23  GHDPASGGIFSSDYKRH-DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKN 81

Query: 361 MQTENLELKKLVYLYLINYAKSQPDLAILAVNTF 462
           +  +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF
Sbjct: 82  VACKNIEVKKLVYVYLVRYAEEQQDLALLSISTF 115

to top

>AP2B_SCHPO (O43005) AP-2 complex subunit beta (Beta-adaptin) (Clathrin|
           assembly protein large beta chain) (Clathrin assembly
           protein complex 2 beta large chain)
          Length = 677

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 37/91 (40%), Positives = 53/91 (58%)
 Frame = +1

Query: 199 SKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENL 378
           S +FS+T    +     +   +  +KR  A+KK IA ++ G D+SSLF  V++ M++ NL
Sbjct: 5   SSHFSSTAADLLAVFSSDNKDKSANKRISALKKAIAGISYGYDMSSLFPSVISSMESNNL 64

Query: 379 ELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
           ELKKL YLYL  YA  +P  A  AV   + D
Sbjct: 65  ELKKLCYLYLKIYASVKPTEAKRAVKLILND 95

to top

>AP4B1_HUMAN (Q9Y6B7) AP-4 complex subunit beta-1 (Adapter-related protein|
           complex 4 beta 1 subunit) (Beta subunit of AP-4) (AP-4
           adapter complex beta subunit)
          Length = 739

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
 Frame = +1

Query: 232 IPELKEELNSQY----KDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVY 399
           + ELK+ L + +    + + ++ +++VI  MT G D+S +F ++V    T ++  KKLVY
Sbjct: 10  VKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATVDIVQKKLVY 69

Query: 400 LYLINYAKSQPDLAILAVNTFVKD 471
           LY+  YA  +PDLA+LA+NT  KD
Sbjct: 70  LYMCTYAPLKPDLALLAINTLCKD 93

to top

>AP3B_SCHPO (O13939) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related|
           protein complex 3 beta subunit) (Clathrin assembly
           protein large beta chain) (Clathrin assembly protein
           complex 3 beta large chain)
          Length = 745

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 31/77 (40%), Positives = 51/77 (66%)
 Frame = +1

Query: 238 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINY 417
           +L   LNS     + +A+  ++A M  G+++S  F DVV  + +EN E+++LV++YL+ Y
Sbjct: 37  DLLRLLNSNSDAGKLEAINFILAQMMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQY 96

Query: 418 AKSQPDLAILAVNTFVK 468
           A+  PDLA+L+VNT  K
Sbjct: 97  AEFNPDLALLSVNTVQK 113

to top

>AP4B1_MOUSE (Q9WV76) AP-4 complex subunit beta-1 (Adapter-related protein|
           complex 4 beta-1 subunit) (Beta subunit of AP-4) (AP-4
           adapter complex beta subunit)
          Length = 739

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
 Frame = +1

Query: 232 IPELKEELNSQY----KDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVY 399
           + ELK+ L + +    + + ++ +++VI  MT G D+S +F ++V    T ++  KKLVY
Sbjct: 10  VKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGLDMSDVFMEMVKASATVDIVQKKLVY 69

Query: 400 LYLINYAKSQPDLAILAVNTFVKD 471
           LY+  YA  +PDLA+LA+NT  KD
Sbjct: 70  LYMGTYAPLKPDLALLAINTLCKD 93

to top

>AP3B_ASHGO (Q759E2) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related|
           protein complex 3 beta subunit) (Clathrin assembly
           protein large beta chain) (Clathrin assembly protein
           complex 3 beta large chain)
          Length = 781

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 27/91 (29%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGK---DVSSLFTDVVNCMQ 366
           +S YF  +K  +   L   LNS+Y  + +D +K+V++ M  G    ++ + F D+V  + 
Sbjct: 32  ESSYFHYSKSIDSESLPGLLNSRYTREVRDGMKRVMSLMGSGDSSIELETHFADIVKNIG 91

Query: 367 TENLELKKLVYLYLINYAKSQPDLAILAVNT 459
           +++++++++V +YL+ YA++ P+LA+L++N+
Sbjct: 92  SDDVKVRRMVSVYLLRYAETNPNLALLSINS 122

to top

>AP3B_YEAST (P46682) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related|
           protein complex 3 beta subunit) (Clathrin assembly
           protein large beta chain) (Clathrin assembly protein
           complex 3 beta large chain)
          Length = 809

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKD---VSSLFTDVVNCMQ 366
           +S Y   ++     +L   LNS+   + +DA+K++I+ M    D   V   F DVV  + 
Sbjct: 32  ESSYTYYSQNINPQQLVTLLNSRNSREVRDAMKRIISIMASDDDSIDVQLYFADVVKNIT 91

Query: 367 TENLELKKLVYLYLINYAKSQPDLAILAVNTFVK 468
           T + ++K+L++LYL+ +A++ P+L +L++N+  K
Sbjct: 92  TNDTKVKRLIHLYLLRFAENDPNLTLLSINSLQK 125

to top

>AP3D_DROME (P54362) AP-3 complex subunit delta (Delta-adaptin) (Garnet|
           protein) (Delta adaptin subunit of AP-3)
          Length = 1034

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 24/93 (25%), Positives = 42/93 (45%)
 Frame = +1

Query: 193 HDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTE 372
           +++KY ST     I E+K+EL       + +AV K+     +G D+S    +++  M + 
Sbjct: 32  NEAKYISTC----IEEIKQELRQDNISVKCNAVAKLTYIQMLGYDISWAGFNIIEVMSSS 87

Query: 373 NLELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
               K++ YL          +L +L  N   KD
Sbjct: 88  RFTCKRIGYLAASQCFHPDSELLMLTTNMIRKD 120

to top

>AP2B_YEAST (P27351) AP-2 complex subunit beta (Beta-adaptin) (Clathrin|
           assembly protein large beta chain) (Clathrin assembly
           protein complex 2 beta large chain)
          Length = 700

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
 Frame = +1

Query: 196 DSKYFSTTKKGEI-PELKEELNSQYKD---KRKDAVKKVIAAMTVGK--DVSSLFTDVVN 357
           D K F+  K  EI  +L+     ++K    +RK+A++K+IA + +G   ++S LF++++ 
Sbjct: 3   DQKVFARYKANEIVTDLQHFGVKKFKSNITRRKNALRKIIANLVLGNYGEMSVLFSELLK 62

Query: 358 CMQTE-NLELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
             Q E +LE+K++ + Y+      +P  A  A+   + D
Sbjct: 63  FWQIEDDLEVKRICHEYIRVIGALKPQQAREALPFIMDD 101

to top

>AP3D1_BOVIN (Q865S1) AP-3 complex subunit delta-1 (Adapter-related protein|
           complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3
           complex delta subunit) (Delta-adaptin)
          Length = 1207

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 23/92 (25%), Positives = 39/92 (42%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           ++KY S      I E+K+EL       + +AV K+     +G D+S    +++  M    
Sbjct: 32  EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
              K++ YL          D+ +L  N   KD
Sbjct: 88  FTFKRIGYLAASQCFHEGTDVIMLTTNQIRKD 119

to top

>AP3D1_HUMAN (O14617) AP-3 complex subunit delta-1 (Adapter-related protein|
           complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3
           complex delta subunit) (Delta-adaptin)
          Length = 1153

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 23/92 (25%), Positives = 39/92 (42%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           ++KY S      I E+K+EL       + +AV K+     +G D+S    +++  M    
Sbjct: 32  EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
              K++ YL          D+ +L  N   KD
Sbjct: 88  FTFKRIGYLAASQSFHEGTDVIMLTTNQIRKD 119

to top

>AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-related protein|
           complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3
           complex delta subunit) (Delta-adaptin) (mBLVR1)
          Length = 1199

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 23/92 (25%), Positives = 39/92 (42%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           ++KY S      I E+K+EL       + +AV K+     +G D+S    +++  M    
Sbjct: 32  EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87

Query: 376 LELKKLVYLYLINYAKSQPDLAILAVNTFVKD 471
              K++ YL          D+ +L  N   KD
Sbjct: 88  FTFKRVGYLAASQCFHEGTDVIMLTTNQIRKD 119

to top

>AP4E1_HUMAN (Q9UPM8) AP-4 complex subunit epsilon-1 (Adapter-related protein|
           complex 4 epsilon-1 subunit) (Epsilon subunit of AP-4)
           (AP-4 adapter complex epsilon subunit)
          Length = 1137

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +1

Query: 280 KDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNT 459
           K+ + ++I    +G D S  +   +   Q  NL  K++ YL +  +     +L +L VNT
Sbjct: 78  KECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNT 137

Query: 460 FVKD 471
            VKD
Sbjct: 138 VVKD 141

to top

>AP4E1_MOUSE (Q80V94) AP-4 complex subunit epsilon-1 (Adapter-related protein|
           complex 4 epsilon-1 subunit) (Epsilon subunit of AP-4)
           (AP-4 adapter complex epsilon subunit)
          Length = 1122

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +1

Query: 280 KDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNT 459
           K+ + ++I    +G D S  +   +   Q  NL  K++ YL +  +     +L +L VNT
Sbjct: 77  KECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNT 136

Query: 460 FVKD 471
            VKD
Sbjct: 137 VVKD 140

to top

>COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 940

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
 Frame = +1

Query: 232 IPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLY- 405
           +  LK  L S+    +  A+K ++  +  G  + S+   V+   M + N ELKKL+Y Y 
Sbjct: 17  VDALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVMPSRNKELKKLLYYYW 76

Query: 406 ----LINYAKSQPDLAILAVNTFVKD 471
                 N   +     ILA N+F  D
Sbjct: 77  EVCPKYNNDGTMKQEMILACNSFRND 102

to top

>COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 973

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +1

Query: 238 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLY 405
           + ++ L     +++ D +K ++  M  G  +  L   ++   M ++N ELKKL+Y Y
Sbjct: 27  DFQKALEKGSDEQKIDTMKSILVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFY 83

to top

>ATIN_BHV1P (P30020) Alpha trans-inducing protein (Alpha-TIF)|
          Length = 504

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -3

Query: 95  ARGGGRPACLRDGMGLDSARGSQAGVRAC 9
           ARGG  P+ +R G+GL  ARGS     AC
Sbjct: 439 ARGGPGPSPVRSGLGLSRARGSPGPGPAC 467

to top

>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 182 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 57
           +PR  +  N  ++P  A  PG   GG R A G   P   R G
Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267

to top

>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 182 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 57
           +PR  +  N  ++P  A  PG   GG R A G   P   R G
Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267

to top

>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 182 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 57
           +PR  +  N  ++P  A  PG   GG R A G   P   R G
Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267

to top

>FEN1A_ORYSA (Q9SXQ6) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a)|
          Length = 380

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
 Frame = +1

Query: 226 GEIPELKEELNSQYKDKRKDAVKKVIAAMTVG-KDVSSLFTD-VVNCMQTENLELKKLVY 399
           G+ P+LK++  ++   KR+DA K++  A+  G KD    F+   V   +  N E K+L+ 
Sbjct: 88  GKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLR 147

Query: 400 LYLINY----AKSQPDLAILAVNTFV 465
           L  +       +++ + A L +N  V
Sbjct: 148 LMGVPVVEAPCEAEAECAALCINDMV 173

to top

>RRF_WIGBR (Q8D2G5) Ribosome recycling factor (Ribosome-releasing factor)|
           (RRF)
          Length = 185

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
 Frame = +1

Query: 277 RKDA---VKKVIAAMTVGKDVSSLFTDVVNCMQTENLE-LKKLVYL 402
           R+DA   +KK+I A T+GKD    F +V+  +    +E  KK++ L
Sbjct: 132 RRDANEKIKKLIKAKTIGKDEDKKFQEVIQNLTNSRIEDTKKILKL 177

to top

>KINH_STRPU (P35978) Kinesin heavy chain|
          Length = 1031

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 152  HRSPPPAAEPGVRDGGLRYARGGGRP 75
            H  P P    G+R GG    RGGG P
Sbjct: 925  HPPPSPGGSTGIRGGGYSGIRGGGSP 950

to top

>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated|
           protein 10.4) (High sulfur keratin-associated protein
           10.4) (Keratin-associated protein 18-4)
           (Keratin-associated protein 18.4)
          Length = 401

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
 Frame = +3

Query: 285 CCQESDC------SNDCWKRCLIIVYGCCELYAD*ELGAEKTSILISHQLC*KSTRPSDT 446
           CCQ+S C      S+ C + C + V  CC+      + +E +S       C  +   S  
Sbjct: 208 CCQQSSCQPACCTSSSCQQACCVPV--CCKTVCCKPVCSEDSSSCCQQSSCQPACCTSSP 265

Query: 447 CREHIC 464
           C++  C
Sbjct: 266 CQQACC 271

to top

>VCOM_ADEM1 (O10442) Minor core protein (Protein V) (pV)|
          Length = 228

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 24  RLAPPRRVQSHPIAQTGRPPATARISEASITNPGLRSRRR 143
           R  PP  V+ HP  +  RPPA      A I+ P  R RRR
Sbjct: 130 RAVPPVGVRYHPSIEVARPPA------ARISPPRRRRRRR 163

to top

>RENBP_PIG (P17560) N-acylglucosamine 2-epimerase (EC 5.1.3.8) (GlcNAc|
           2-epimerase) (N-acetyl-D-glucosamine 2-epimerase) (AGE)
           (Renin-binding protein) (RnBP)
          Length = 402

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
 Frame = +3

Query: 18  HTRLAPPRRVQSHPIAQTGRPPATAR--ISEASITNPGLRSRRR*PVCIWQVGSPGRYER 191
           H R+APP +  +  + + GRP    R   SE   T             +W+V +  RY+ 
Sbjct: 94  HARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNE--------LWRVTAEARYQS 145

Query: 192 ARLQVL--LHHQKGGDPRAQGGAQLP 263
             + ++  + H    DP   G  QLP
Sbjct: 146 EAVDMMDQIVHWVREDPSGLGRPQLP 171

to top

>RNZ_BRAJA (Q89NF8) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3|
           endonuclease)
          Length = 301

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -3

Query: 152 HRSPPPAAEPGVRDGGLRYARGGGRPACLRDGMGLD 45
           H  P   A  GV DG LR     GRP  + DG  +D
Sbjct: 157 HLLPDRLASLGVPDGPLRGELAQGRPVVIEDGRTID 192

to top

>1433_HELAN (O65352) 14-3-3-like protein|
          Length = 259

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
 Frame = +1

Query: 178 GDMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN 357
           G  SG DSK F    KG+      E  +   D+RK A +  ++A    +D+++      +
Sbjct: 117 GSASGGDSKVFYLKMKGDYYRYLAEFKT--GDERKLAAENTLSAYKAAQDIANAELAPTH 174

Query: 358 CMQTENLELKKLVYLYLI--------NYAKSQPDLAILAVNTFVKD 471
            ++   L L   V+ Y I        N AK   D AI  ++T  +D
Sbjct: 175 PIRL-GLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGED 219

to top

>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated|
           protein 10.2) (High sulfur keratin-associated protein
           10.2) (Keratin-associated protein 18-2)
           (Keratin-associated protein 18.2)
          Length = 255

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
 Frame = +3

Query: 285 CCQESDC------SNDCWKRCLIIVYGCCELYAD*ELGAEKTSILISHQLC*KSTRPSDT 446
           CCQ+S C      S+ C + C + V  CC+        +E +S       C  +   S  
Sbjct: 120 CCQQSSCQPACCASSSCQQSCRVPV--CCKAVCCVPTCSESSSSCCQQSSCQPACCTSSP 177

Query: 447 CREHIC 464
           C++  C
Sbjct: 178 CQQSCC 183

to top

>ROCK1_RABIT (O77819) Rho-associated protein kinase 1 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           1) (p160 ROCK-1) (p160ROCK) (cAMP-dependent protein
           kinase ROCK-I) (CePKA) (Corneal epithelial
           Rho-associated-Ser/Thr kinase 1) (HEB
          Length = 1354

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 300
           +YFST  K ++ ELKEE+    ++K ++ +KK+
Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 878

to top

>ROCK1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           1) (p160 ROCK-1) (p160ROCK) (NY-REN-35 antigen)
          Length = 1354

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 300
           +YFST  K ++ ELKEE+    ++K ++ +KK+
Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 878

to top

>DPOLA_ORYSA (O48653) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1534

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -3

Query: 224 FLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVRDGGLRYARG 87
           F+V +K+  S    S +R   P+T  + P  A+P + D G    +G
Sbjct: 852 FIVPDKFARSKEFNSTKRKMNPDTEAARPDEADPSIDDEGHHVDQG 897

to top

>TARSH_HUMAN (Q7Z7G0) Target of Nesh-SH3 precursor (Tarsh) (Nesh-binding|
           protein) (NeshBP) (ABI gene family member 3-binding
           protein)
          Length = 1075

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +3

Query: 36  PRRVQSHPIAQTGRPPATARISEASITNPGLRSRRR 143
           PRR    P   TG+P +   IS   IT P LRS  R
Sbjct: 716 PRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPR 751

to top

>ROCK1_BOVIN (Q8MIT6) Rho-associated protein kinase 1 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           1) (p160 ROCK-1) (p160ROCK) (Fragment)
          Length = 441

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 300
           +YFST  K ++ ELKEE+    ++K ++ +KK+
Sbjct: 257 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 285

to top

>ROCK1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           1) (p160 ROCK-1) (p160ROCK) (Fragment)
          Length = 1003

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 300
           +YFST  K ++ ELKEE+    ++K ++ +KK+
Sbjct: 499 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 527

to top

>NOLA1_HUMAN (Q9NY12) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar|
           protein family A member 1) (snoRNP protein GAR1)
          Length = 217

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/48 (39%), Positives = 20/48 (41%)
 Frame = -3

Query: 164 LPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDGMGLDSARGSQAG 21
           LP     P P  E G   GG R  RGGGR    R G      RG + G
Sbjct: 152 LPLQRFLPRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG 199

to top

>LEA2_CICAR (O49817) Late embryogenesis abundant protein 2 (CapLEA-2)|
          Length = 155

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +1

Query: 184 MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSS 336
           M+ HD  Y +   KG   E   ++    +DK + A +K   A    KD +S
Sbjct: 1   MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTS 51

to top

>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated|
           protein 10.5) (High sulfur keratin-associated protein
           10.5) (Keratin-associated protein 18-5)
           (Keratin-associated protein 18.5)
          Length = 271

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +3

Query: 285 CCQESDC------SNDCWKRCLIIVYGCCELYAD*ELGAEKTSILISHQLC*KSTRPSDT 446
           CCQ+S C      S+ C + C + V  CC+        +E +S    H  C  +   S  
Sbjct: 110 CCQQSSCQPTCCASSSCQQSCCVPV--CCKPVCCVPTCSEDSSSCCQHSSCQPTCCTSSP 167

Query: 447 CRE 455
           C++
Sbjct: 168 CQQ 170

to top

>ATRIP_DROME (Q9VVN4) ATR-interacting protein mus304 (Mutagen-sensivite protein|
           304)
          Length = 846

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/64 (23%), Positives = 31/64 (48%)
 Frame = +1

Query: 196 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 375
           DSK  +  K GE+  L++EL    +  +   ++K+  A    +D +    +    +  ++
Sbjct: 201 DSKERNEIKSGEVSLLRDELKHLRQQLQASKMEKLALADETNRDCNKKVAEAAKQIAAKD 260

Query: 376 LELK 387
           +ELK
Sbjct: 261 IELK 264

to top

>NELFA_HUMAN (Q9H3P2) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn|
           syndrome candidate 2 protein)
          Length = 549

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 227 PFLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVR 114
           P L    YL S P + P  +Y+P++   P P++    R
Sbjct: 338 PALPSTSYLPSTPSVVPASSYIPSSETPPAPSSREASR 375

to top

>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -3

Query: 191  PLISPRRAYLPNTHRSP--PPAAEPGVRDGGLRYARGGG 81
            P + PR A  P   R P  P  A  G+R  G R+   GG
Sbjct: 2449 PPLGPRYAVFPKDQRGPYPPDVASMGMRPHGFRFGFPGG 2487


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,137,441
Number of Sequences: 219361
Number of extensions: 1083990
Number of successful extensions: 4277
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 4014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4269
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result