ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl22b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
3dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
4dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA... 52 0.002
5gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, co... 44 0.44
6ref|XM_852677.1| PREDICTED: Canis familiaris similar to discs la... 44 0.44
7ref|XM_852594.1| PREDICTED: Canis familiaris similar to discs la... 44 0.44
8ref|XM_843878.1| PREDICTED: Canis familiaris similar to discs la... 44 0.44
9ref|XM_852476.1| PREDICTED: Canis familiaris similar to discs la... 44 0.44
10ref|XM_852435.1| PREDICTED: Canis familiaris similar to discs la... 44 0.44
11ref|XM_852393.1| PREDICTED: Canis familiaris similar to discs la... 44 0.44
12ref|XM_852353.1| PREDICTED: Canis familiaris similar to discs la... 44 0.44
13emb|CR847524.5| Zebrafish DNA sequence from clone DKEY-77M9 in l... 44 0.44
14gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosom... 44 0.44
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
16dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
17gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, compl... 44 0.44
18emb|BX088721.5| Zebrafish DNA sequence from clone DKEY-14M2 in l... 44 0.44
19gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, com... 42 1.7
20gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, com... 42 1.7
21gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.7
22gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, com... 42 1.7
23gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete... 42 1.7
24dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.7
25gb|AC130536.4| Mus musculus BAC clone RP23-369M17 from 13, compl... 42 1.7
26emb|CT486008.9| Mouse DNA sequence from clone RP24-112G3 on chro... 42 1.7
27gb|AC131187.4| Mus musculus BAC clone RP24-250M7 from 13, comple... 42 1.7
28gb|BC056534.1| Danio rerio tissue inhibitor of metalloproteinase... 40 6.9
29gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.9
30ref|XM_854820.1| PREDICTED: Canis familiaris similar to zinc fin... 40 6.9
31ref|XM_538605.2| PREDICTED: Canis familiaris similar to zinc fin... 40 6.9
32emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 i... 40 6.9
33emb|BX021318.1|CNS08OM2 Single read from an extremity of a full-... 40 6.9
34gb|AC008759.9| Homo sapiens chromosome 19 clone CTD-3116E22, com... 40 6.9
35dbj|AK122974.1| Homo sapiens cDNA FLJ16721 fis, clone UTERU30016... 40 6.9
36gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, compl... 40 6.9
37emb|BX248308.11| Zebrafish DNA sequence from clone DKEY-247M21 i... 40 6.9
38ref|NM_001029162.2| Caenorhabditis elegans C02C6.2a (C02C6.2) mR... 40 6.9
39emb|AL935286.14| Zebrafish DNA sequence from clone CH211-198E14 ... 40 6.9
40gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR c... 40 6.9
41ref|XM_315491.2| Anopheles gambiae str. PEST ENSANGP00000021218 ... 40 6.9
42emb|AL840629.24| Mouse DNA sequence from clone RP23-334A5 on chr... 40 6.9
43emb|Z79596.1|CEC02C6 Caenorhabditis elegans Cosmid C02C6, comple... 40 6.9
44emb|AL645974.7| Mouse DNA sequence from clone RP23-249M13 on chr... 40 6.9 
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
              complete sequence
          Length = 166951

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 472    atgatgatcccggcgaggcacatgccgtcg 501
              |||||||||||||||||||| |||||||||
Sbjct: 113372 atgatgatcccggcgaggcatatgccgtcg 113343



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 274    gttgcgtggcaagcaagatatatata 299
              ||||| ||||||||||||||||||||
Sbjct: 113561 gttgcttggcaagcaagatatatata 113536
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 472      atgatgatcccggcgaggcacatgccgtcg 501
                |||||||||||||||||||| |||||||||
Sbjct: 31940506 atgatgatcccggcgaggcatatgccgtcg 31940477



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 274      gttgcgtggcaagcaagatatatata 299
                ||||| ||||||||||||||||||||
Sbjct: 31940695 gttgcttggcaagcaagatatatata 31940670
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>dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D01, full
           insert sequence
          Length = 2343

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 472 atgatgatcccggcgaggcacatgccgtcg 501
           |||||||||||||||||||| |||||||||
Sbjct: 495 atgatgatcccggcgaggcatatgccgtcg 524



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 274 gttgcgtggcaagcaagatatatata 299
           ||||| ||||||||||||||||||||
Sbjct: 306 gttgcttggcaagcaagatatatata 331
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>dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA for GL2-type
           homeodomain protein, complete cds
          Length = 3063

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 472 atgatgatcccggcgaggcacatgccgtcg 501
           |||||||||||||||||||| |||||||||
Sbjct: 257 atgatgatcccggcgaggcatatgccgtcg 286



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 274 gttgcgtggcaagcaagatatatata 299
           ||||| ||||||||||||||||||||
Sbjct: 68  gttgcttggcaagcaagatatatata 93
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>gb|AC114671.14| Mus musculus chromosome 5, clone RP24-199D21, complete sequence
          Length = 172228

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 358   agagatgcagatgtgtgtgtga 379
             ||||||||||||||||||||||
Sbjct: 34198 agagatgcagatgtgtgtgtga 34177
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>ref|XM_852677.1| PREDICTED: Canis familiaris similar to discs large
           homolog-associated protein 1 isoform beta, transcript
           variant 13 (LOC480194), mRNA
          Length = 2917

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 cacgcagcgcaactccttccag 140
           ||||||||||||||||||||||
Sbjct: 148 cacgcagcgcaactccttccag 169
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>ref|XM_852594.1| PREDICTED: Canis familiaris similar to discs large
           homolog-associated protein 1 isoform beta, transcript
           variant 12 (LOC480194), mRNA
          Length = 2941

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 cacgcagcgcaactccttccag 140
           ||||||||||||||||||||||
Sbjct: 148 cacgcagcgcaactccttccag 169
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>ref|XM_843878.1| PREDICTED: Canis familiaris similar to discs large
           homolog-associated protein 1 isoform beta, transcript
           variant 5 (LOC480194), mRNA
          Length = 2971

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 cacgcagcgcaactccttccag 140
           ||||||||||||||||||||||
Sbjct: 148 cacgcagcgcaactccttccag 169
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>ref|XM_852476.1| PREDICTED: Canis familiaris similar to discs large
           homolog-associated protein 1 isoform beta, transcript
           variant 10 (LOC480194), mRNA
          Length = 2914

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 cacgcagcgcaactccttccag 140
           ||||||||||||||||||||||
Sbjct: 148 cacgcagcgcaactccttccag 169
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>ref|XM_852435.1| PREDICTED: Canis familiaris similar to discs large
           homolog-associated protein 1 isoform beta, transcript
           variant 9 (LOC480194), mRNA
          Length = 2926

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 cacgcagcgcaactccttccag 140
           ||||||||||||||||||||||
Sbjct: 148 cacgcagcgcaactccttccag 169
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>ref|XM_852393.1| PREDICTED: Canis familiaris similar to discs large
           homolog-associated protein 1 isoform beta, transcript
           variant 8 (LOC480194), mRNA
          Length = 2887

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 cacgcagcgcaactccttccag 140
           ||||||||||||||||||||||
Sbjct: 148 cacgcagcgcaactccttccag 169
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>ref|XM_852353.1| PREDICTED: Canis familiaris similar to discs large
           homolog-associated protein 1 isoform beta, transcript
           variant 7 (LOC480194), mRNA
          Length = 2938

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 cacgcagcgcaactccttccag 140
           ||||||||||||||||||||||
Sbjct: 148 cacgcagcgcaactccttccag 169
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>emb|CR847524.5| Zebrafish DNA sequence from clone DKEY-77M9 in linkage group 14,
             complete sequence
          Length = 149148

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 253   agatctgctgctgctcgtgctg 274
             ||||||||||||||||||||||
Sbjct: 51879 agatctgctgctgctcgtgctg 51858
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>gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosome 5, complete
           sequence
          Length = 184560

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 358 agagatgcagatgtgtgtgtga 379
           ||||||||||||||||||||||
Sbjct: 278 agagatgcagatgtgtgtgtga 299
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 256     tctgctgctgctcgtgctgttg 277
               ||||||||||||||||||||||
Sbjct: 1868877 tctgctgctgctcgtgctgttg 1868856
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>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0001H02
          Length = 147160

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 256   tctgctgctgctcgtgctgttg 277
             ||||||||||||||||||||||
Sbjct: 69355 tctgctgctgctcgtgctgttg 69334
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>gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, complete sequence
          Length = 182420

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 296   tatacccctctctccatatata 317
             ||||||||||||||||||||||
Sbjct: 35521 tatacccctctctccatatata 35542
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>emb|BX088721.5| Zebrafish DNA sequence from clone DKEY-14M2 in linkage group 14, complete
              sequence
          Length = 231054

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 253    agatctgctgctgctcgtgctg 274
              ||||||||||||||||||||||
Sbjct: 109893 agatctgctgctgctcgtgctg 109872
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>gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, complete sequence
          Length = 158043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 369   tgtgtgtgtgaagaaatggaa 389
             |||||||||||||||||||||
Sbjct: 44498 tgtgtgtgtgaagaaatggaa 44478
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>gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, complete sequence
          Length = 226006

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 369  tgtgtgtgtgaagaaatggaa 389
            |||||||||||||||||||||
Sbjct: 3955 tgtgtgtgtgaagaaatggaa 3935
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 258     tgctgctgctcgtgctgttgc 278
               |||||||||||||||||||||
Sbjct: 3207361 tgctgctgctcgtgctgttgc 3207341
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>gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, complete sequence
          Length = 196977

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 369  tgtgtgtgtgaagaaatggaa 389
            |||||||||||||||||||||
Sbjct: 8712 tgtgtgtgtgaagaaatggaa 8732
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>gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete sequence
          Length = 182627

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 289   agatatatatacccctctctccatatata 317
             |||||||||||| |||||||| |||||||
Sbjct: 99617 agatatatatacacctctctctatatata 99589
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 482     cggcgaggcacatgccgtcgt 502
               |||||||||||||||||||||
Sbjct: 1437005 cggcgaggcacatgccgtcgt 1437025
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>gb|AC130536.4| Mus musculus BAC clone RP23-369M17 from 13, complete sequence
          Length = 188021

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   agatgcagatgtgtgtgtgaa 380
             |||||||||||||||||||||
Sbjct: 10334 agatgcagatgtgtgtgtgaa 10314
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>emb|CT486008.9| Mouse DNA sequence from clone RP24-112G3 on chromosome 17, complete
             sequence
          Length = 129106

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 367   gatgtgtgtgtgaagaaatggaagg 391
             |||||||||||||||||||| ||||
Sbjct: 24942 gatgtgtgtgtgaagaaatgcaagg 24918
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>gb|AC131187.4| Mus musculus BAC clone RP24-250M7 from 13, complete sequence
          Length = 159288

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 360    agatgcagatgtgtgtgtgaa 380
              |||||||||||||||||||||
Sbjct: 128679 agatgcagatgtgtgtgtgaa 128659
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>gb|BC056534.1| Danio rerio tissue inhibitor of metalloproteinase 2, like, mRNA
           (cDNA clone MGC:65967 IMAGE:6791963), complete cds
          Length = 1899

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tctgctgctgctcgtgctgt 275
           ||||||||||||||||||||
Sbjct: 123 tctgctgctgctcgtgctgt 142
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>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940128D9, complete sequence
          Length = 128585

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ctgctgctgctcgtgctgtt 276
             ||||||||||||||||||||
Sbjct: 29660 ctgctgctgctcgtgctgtt 29641
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>ref|XM_854820.1| PREDICTED: Canis familiaris similar to zinc finger protein 608,
           transcript variant 2 (LOC481484), mRNA
          Length = 6033

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tgctgctgctcgtgctgttg 277
           ||||||||||||||||||||
Sbjct: 682 tgctgctgctcgtgctgttg 663
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>ref|XM_538605.2| PREDICTED: Canis familiaris similar to zinc finger protein 608,
           transcript variant 1 (LOC481484), mRNA
          Length = 6002

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tgctgctgctcgtgctgttg 277
           ||||||||||||||||||||
Sbjct: 651 tgctgctgctcgtgctgttg 632
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>emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 in linkage group 9,
              complete sequence
          Length = 210207

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    tgtactacaccatctttgtt 344
              ||||||||||||||||||||
Sbjct: 114370 tgtactacaccatctttgtt 114351
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>emb|BX021318.1|CNS08OM2 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA31CD12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 691

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 348 ggggaaggagagagatgcag 367
           ||||||||||||||||||||
Sbjct: 226 ggggaaggagagagatgcag 207
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>gb|AC008759.9| Homo sapiens chromosome 19 clone CTD-3116E22, complete sequence
          Length = 206395

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   ggaggggaaggagagagatg 364
             ||||||||||||||||||||
Sbjct: 60977 ggaggggaaggagagagatg 60996
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>dbj|AK122974.1| Homo sapiens cDNA FLJ16721 fis, clone UTERU3001632, weakly  similar
            to Homo sapiens zinc finger protein 135 (clone pHZ-17)
            (ZNF135)
          Length = 4409

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  ggaggggaaggagagagatg 364
            ||||||||||||||||||||
Sbjct: 3505 ggaggggaaggagagagatg 3486
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>gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, complete sequence
          Length = 174372

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 354   ggagagagatgcagatgtgtgtgt 377
             |||||||||| |||||||||||||
Sbjct: 53868 ggagagagatccagatgtgtgtgt 53891
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>emb|BX248308.11| Zebrafish DNA sequence from clone DKEY-247M21 in linkage group 21,
             complete sequence
          Length = 171606

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   gagatgcagatgtgtgtgtg 378
             ||||||||||||||||||||
Sbjct: 50526 gagatgcagatgtgtgtgtg 50507
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>ref|NM_001029162.2| Caenorhabditis elegans C02C6.2a (C02C6.2) mRNA, complete cds
          Length = 2508

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 362  atgcagatgtgtgtgtgaag 381
            ||||||||||||||||||||
Sbjct: 1902 atgcagatgtgtgtgtgaag 1883
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>emb|AL935286.14| Zebrafish DNA sequence from clone CH211-198E14 in linkage group 22,
             complete sequence
          Length = 211297

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   cgtcctagatctctctctct 224
             ||||||||||||||||||||
Sbjct: 96913 cgtcctagatctctctctct 96932
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>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
             putative defense response protein, and putative alliin
             lyase genes, complete cds; and unknown genes
          Length = 106618

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 428   ttagctatattggctagcagcaag 451
             ||||||||||||||||| ||||||
Sbjct: 60365 ttagctatattggctaggagcaag 60388
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>ref|XM_315491.2| Anopheles gambiae str. PEST ENSANGP00000021218 (ENSANGG00000018729),
            partial mRNA
          Length = 3450

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 255  atctgctgctgctcgtgctg 274
            ||||||||||||||||||||
Sbjct: 3266 atctgctgctgctcgtgctg 3285
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>emb|AL840629.24| Mouse DNA sequence from clone RP23-334A5 on chromosome 4, complete
              sequence
          Length = 214140

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    gtgtgtgtgaagaaatggaa 389
              ||||||||||||||||||||
Sbjct: 189383 gtgtgtgtgaagaaatggaa 189364
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>emb|Z79596.1|CEC02C6 Caenorhabditis elegans Cosmid C02C6, complete sequence
          Length = 43379

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   atgcagatgtgtgtgtgaag 381
             ||||||||||||||||||||
Sbjct: 11580 atgcagatgtgtgtgtgaag 11561
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>emb|AL645974.7| Mouse DNA sequence from clone RP23-249M13 on chromosome 11, complete
             sequence
          Length = 136134

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tctgctgctgctcgtgctgt 275
             ||||||||||||||||||||
Sbjct: 35819 tctgctgctgctcgtgctgt 35838


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,731,323
Number of Sequences: 3902068
Number of extensions: 9731323
Number of successful extensions: 111425
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111186
Number of HSP's gapped (non-prelim): 239
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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