ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22b02 |
|---|---|
| Clone Library Name | barley_pub |
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 211 bits (537), Expect = 9e-55 Identities = 102/141 (72%), Positives = 122/141 (86%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 D NNG RG+VG EA+LEQWL T+LP +TTGE+KF VTF+W V+K+G+PGAIIVKNNHA+ Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKNNHAA 118 Query: 434 EFFLKTITLDNVPGRGTIVFV 496 EFFLKTITLDNVPG G +VFV Sbjct: 119 EFFLKTITLDNVPGHGAVVFV 139
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 205 bits (522), Expect = 5e-53 Identities = 101/142 (71%), Positives = 122/142 (85%), Gaps = 1/142 (0%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 D NNG RGKVGAEA+LEQW L ++LP +TTGE++F VTFDW VDKLGVPGAIIVKN+H++ Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKNHHSN 120 Query: 434 EFFLKTITLDNVPGR-GTIVFV 496 EFFLKTITLD+VPGR G +VF+ Sbjct: 121 EFFLKTITLDDVPGRAGAVVFL 142
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 199 bits (505), Expect = 4e-51 Identities = 97/142 (68%), Positives = 117/142 (82%), Gaps = 1/142 (0%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 D +NGGRGKVGAEA LEQW+ T+LP +TTGE+KF +TFDW V+KLGVPGAI+V N H+S Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSS 120 Query: 434 EFFLKTITLDNVPGR-GTIVFV 496 EF LKTITL +VPGR G + FV Sbjct: 121 EFLLKTITLHDVPGRSGNLTFV 142
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 150 bits (380), Expect = 1e-36 Identities = 78/141 (55%), Positives = 102/141 (72%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 433 D NN GRG VG+EANLEQ L T+LP ++ GE+K V F+W +DK GVPGAII+KN+H++ Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKNHHST 118 Query: 434 EFFLKTITLDNVPGRGTIVFV 496 +FFLKTITL +VPG TIVFV Sbjct: 119 KFFLKTITLHDVPGCDTIVFV 139
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 132 bits (331), Expect = 7e-31 Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 1/142 (0%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 250 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 251 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHA 430 D G GK+ A LE WL T++ IT GE+ F+VTFDW D+ GVPGA I+KN H Sbjct: 63 YD---GLEGKLSNPAYLESWL--TDITPITAGESTFSVTFDWDRDEFGVPGAFIIKNLHL 117 Query: 431 SEFFLKTITLDNVPGRGTIVFV 496 +EFFLK++TL++VP G I FV Sbjct: 118 NEFFLKSLTLEDVPNYGKIHFV 139
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 128 bits (321), Expect = 1e-29 Identities = 64/137 (46%), Positives = 92/137 (67%), Gaps = 3/137 (2%) Frame = +2 Query: 95 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 265 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 266 GGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEFFL 445 G +GK+G A+LE W+ T + +T GE+ F VTFD+ D G PGA +++N+H SEF L Sbjct: 69 GSKGKLGKAAHLEDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNSHFSEFLL 125 Query: 446 KTITLDNVPGRGTIVFV 496 K++TL++VPG G + ++ Sbjct: 126 KSLTLEDVPGHGRVHYI 142
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 122 bits (306), Expect = 5e-28 Identities = 67/143 (46%), Positives = 92/143 (64%), Gaps = 5/143 (3%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 248 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNH 427 D NG +GK A LE +LL L + GE F VTFDW+ ++ GVPGA ++KN H Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL--TLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKNMH 117 Query: 428 ASEFFLKTITLDNVPGRGTIVFV 496 +EFFLK++TL++VP G + FV Sbjct: 118 INEFFLKSLTLEDVPNHGKVHFV 140
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 120 bits (301), Expect = 2e-27 Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 6/147 (4%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLGR--GVTCQL 235 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 236 ISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIV 415 +S+T D +NGGRGK+G A+LE+ L + GE+ F V F+W + G+PGA++V Sbjct: 63 VSATARDPSNGGRGKLGKPAHLEE--LVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119 Query: 416 KNNHASEFFLKTITLDNVPGRGTIVFV 496 N++ SEFFLKT+TLD VPG+GT+VFV Sbjct: 120 TNSNRSEFFLKTLTLDGVPGKGTVVFV 146
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 114 bits (284), Expect = 2e-25 Identities = 63/143 (44%), Positives = 87/143 (60%), Gaps = 5/143 (3%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 248 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNH 427 D NG +GK A LE L T P E F VTFDW+ ++ GVPGA I+KN H Sbjct: 61 QGDPTNGLQGKHSNPAYLENSLF-TLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKNMH 118 Query: 428 ASEFFLKTITLDNVPGRGTIVFV 496 +EFFLK++TL++VP G + FV Sbjct: 119 INEFFLKSLTLEDVPNHGKVHFV 141
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 106 bits (264), Expect = 4e-23 Identities = 67/154 (43%), Positives = 92/154 (59%), Gaps = 19/154 (12%) Frame = +2 Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 214 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 215 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLG 394 R V+ QLIS+T D N G+GKVG + LE L +LP + GE+ F + F+W ++G Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGESAFNIHFEWD-HEMG 118 Query: 395 VPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFV 496 +PGA +KN EFFLK++TL++VP GTI FV Sbjct: 119 IPGAFYIKNYMQVEFFLKSLTLEDVPNHGTIRFV 152
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 103 bits (256), Expect = 3e-22 Identities = 66/163 (40%), Positives = 92/163 (56%), Gaps = 19/163 (11%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 187 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 188 MDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVT 367 +D +T LGR V QLIS+T N G+GKVG + LE ++ +LP + GE+ F + Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGESAFNIQ 114 Query: 368 FDWSVDKLGVPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFV 496 F+W + +G+PGA +KN EF+LK++TL++VP +GTI FV Sbjct: 115 FEWD-ESMGIPGAFYIKNYMQVEFYLKSLTLEDVPNQGTIRFV 156
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 101 bits (251), Expect = 1e-21 Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 14/150 (9%) Frame = +2 Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 226 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 227 CQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGA 406 QLIS+T D G+GK+G LE + ++LP + G++ F + F+W D +G+PGA Sbjct: 63 LQLISATKPDAT--GKGKLGKATFLEGII--SSLPTLGAGQSAFKIHFEWD-DDMGIPGA 117 Query: 407 IIVKNNHASEFFLKTITLDNVPGRGTIVFV 496 +KN +EFFL ++TLD++P G+I FV Sbjct: 118 FYIKNFMQTEFFLVSLTLDDIPNHGSIYFV 147
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 98.2 bits (243), Expect = 1e-20 Identities = 57/128 (44%), Positives = 81/128 (63%) Frame = +2 Query: 113 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAE 292 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG + Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKD 61 Query: 293 ANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEFFLKTITLDNVP 472 LE + T+LP + GE+ F + F+W +G+PGA +KN EFFLK++TL+ + Sbjct: 62 TFLEG--INTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKNYMQVEFFLKSLTLEAIS 118 Query: 473 GRGTIVFV 496 +GTI FV Sbjct: 119 NQGTIRFV 126
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 95.1 bits (235), Expect = 9e-20 Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 15/149 (10%) Frame = +2 Query: 95 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 229 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 QLIS+T D N G+GK+G LE + T+LP + G++ F + F+W D G+ GA Sbjct: 61 QLISATKADAN--GKGKLGKATFLEGII--TSLPTLGAGQSAFKINFEWD-DGSGILGAF 115 Query: 410 IVKNNHASEFFLKTITLDNVPGRGTIVFV 496 +KN +EFFL ++TL+++P G+I FV Sbjct: 116 YIKNFMQTEFFLVSLTLEDIPNHGSIHFV 144
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 92.4 bits (228), Expect = 6e-19 Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 22/151 (14%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 +G +KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 403 + QLIS+T D G GKVG E LE+ L PT LP + ++ F++ F+W G+PG Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKHL-PT-LPTLGARQDAFSIFFEWDAS-FGIPG 121 Query: 404 AIIVKNNHASEFFLKTITLDNVPGRGTIVFV 496 A +KN EFFL ++ L+++P GTI FV Sbjct: 122 AFYIKNFMTDEFFLVSVKLEDIPNHGTIEFV 152
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 92.0 bits (227), Expect = 8e-19 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 22/151 (14%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 403 QLIS+T D G GKVG + LE+ L +LP + ++ F V F+W + G+P Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL--PSLPNLGDRQDAFNVYFEWD-ENFGIPE 121 Query: 404 AIIVKNNHASEFFLKTITLDNVPGRGTIVFV 496 A +KN SEFFL ++TL+++P GTI FV Sbjct: 122 AFYIKNFMQSEFFLVSLTLEDIPNHGTIHFV 152
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 87.8 bits (216), Expect = 1e-17 Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 13/144 (9%) Frame = +2 Query: 104 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 244 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 245 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNN 424 T D GG+GK+G NL + LP + GE + V F+W D G+PGA +KN Sbjct: 64 TKAD---GGKGKIGKSTNLRGKI---TLPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKNF 116 Query: 425 HASEFFLKTITLDNVPGRGTIVFV 496 +EF+LK++ L+++P GTI FV Sbjct: 117 MQNEFYLKSLILEDIPNHGTIHFV 140
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 85.1 bits (209), Expect = 9e-17 Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 21/149 (14%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 229 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 +LIS+T D + G+GKV EA LE L T++P + ++ F+V F+W +G PGA Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIPTLGDKQSAFSVHFEWD-SNMGTPGAF 122 Query: 410 IVKN-NHASEFFLKTITLDNVPGRGTIVF 493 ++N EFFL ++TLD+VP G+I F Sbjct: 123 YIENFMQGGEFFLVSLTLDDVPNVGSIKF 151
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 43.1 bits (100), Expect = 4e-04 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 1/115 (0%) Frame = +2 Query: 122 LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANL 301 L+ ++ + RK D + A +D + +++GR V +LIS+ H + ++ Sbjct: 80 LRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKI--HPRTKKPMQSGRVSI 137 Query: 302 EQWLLPTNLPFITTGENKFAVTFDWSVDK-LGVPGAIIVKNNHASEFFLKTITLD 463 + W G++ T +++VD G PGAI V N H EFFL++I ++ Sbjct: 138 KDWCQKRG----AKGDH-VVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVE 187
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 42.4 bits (98), Expect = 7e-04 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%) Frame = +2 Query: 134 VVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWL 313 V + R+ D D A +D + + +GR V +L+S T D G K A L W Sbjct: 72 VTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVS-TETDPRKGTPKKSKPSA-LVGWF 129 Query: 314 LPTNLPFITTGENKFAVTFDWSVDK-LGVPGAIIVKNNHASEFFLKTITLDNVP 472 ++ + T +++VD G PGA+ V N H EF++++I ++ P Sbjct: 130 DKKDVK-----AERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFP 178
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 40.8 bits (94), Expect = 0.002 Identities = 16/34 (47%), Positives = 25/34 (73%) Frame = +2 Query: 395 VPGAIIVKNNHASEFFLKTITLDNVPGRGTIVFV 496 +PGA +KN EF+LK++TL+++P GTI F+ Sbjct: 1 IPGAFYIKNFMQVEFYLKSLTLEDIPNHGTIHFI 34
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 35.4 bits (80), Expect = 0.085 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -3 Query: 273 RPPLLWSTLVELMSWQVTPRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 R P L++ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 108 RPPVRSLTMPPTP 70 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 34.7 bits (78), Expect = 0.14 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = -3 Query: 318 GRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMR 139 G+ + R SAP+ + + + ++++S RS +PS+ +SLKS R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 138 TTEPLRWAPR-RPPVR 94 T +P R+APR PPVR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>CAGE_HELPY (Q48252) CAG pathogenicity island protein 23 (Protein picB)| Length = 983 Score = 32.3 bits (72), Expect = 0.72 Identities = 23/70 (32%), Positives = 32/70 (45%) Frame = +2 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 QLI++ DHN+ G A L + TN F +NK D+S +GV G+ Sbjct: 742 QLINAFGKDHNDPN----GLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSS 797 Query: 410 IVKNNHASEF 439 + NN S F Sbjct: 798 FLDNNDVSPF 807
>CAGE_HELPJ (Q9ZLT4) CAG pathogenicity island protein 23 (Protein picB)| Length = 983 Score = 32.3 bits (72), Expect = 0.72 Identities = 23/70 (32%), Positives = 32/70 (45%) Frame = +2 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 QLI++ DHN+ G A L + TN F +NK D+S +GV G+ Sbjct: 742 QLINAFGKDHNDPN----GLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSS 797 Query: 410 IVKNNHASEF 439 + NN S F Sbjct: 798 FLDNNDVSPF 807
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 31.2 bits (69), Expect = 1.6 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = -3 Query: 309 HCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTE 130 H S P+ P P L ST+ + + V ++S TP A +SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 129 PLRWAPRRPP 100 P+ AP PP Sbjct: 188 PVTEAPTSPP 197
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 2.1 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 2.1 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -3 Query: 225 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 V P P S +PS AP L SS + ++ W R PP + +PP P+I Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSI 611
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.0 bits (66), Expect = 3.6 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -3 Query: 408 MAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPRPPLLWSTLVELMSW 229 +APGTP + ++S++T + HCS + P P + WS L + W Sbjct: 2528 VAPGTPQVQVEESELT--------LEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 228 Q 226 Q Sbjct: 2576 Q 2576
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 3.6 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -3 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 T P PP M+ +TP P S+ T P+ T +P + ++ T P P Sbjct: 1498 TTPSPP---------MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1547 Query: 108 RPPVRSLTMPPT 73 PP + T+PPT Sbjct: 1548 TPPTSTTTLPPT 1559 Score = 29.6 bits (65), Expect = 4.7 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -3 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT----PSMTVAPKSLKSSAFLRMRTTEPLRWA 115 T P PP + +T + TP P ++ T P+ T +P + TT P Sbjct: 1584 TTPSPPTITTTTPPPTT---TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640 Query: 114 PRRPPVRSLTMPPT 73 P PP + T PPT Sbjct: 1641 PSPPPTTTTTPPPT 1654 Score = 29.3 bits (64), Expect = 6.1 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -3 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 T P PP+ +T + TP P ++ P+ T +P + ++ T P P Sbjct: 1452 TTPSPPISTTTTPPPTT---TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 1508 Query: 108 RPPVRSLTMPPT 73 PP + T+PPT Sbjct: 1509 TPPASTTTLPPT 1520
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 4.7 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 140 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 4.7 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 4.7 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -2 Query: 187 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 6.1 Identities = 22/74 (29%), Positives = 30/74 (40%) Frame = -3 Query: 288 APTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 AP PP + + V M V +P SSV P+ T +L S P AP+ Sbjct: 1480 APVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA-TAPSSTLPPSQSSFAHVPSPAPPAPQ 1538 Query: 108 RPPVRSLTMPPTPN 67 P +L+ P N Sbjct: 1539 HPSAAALSSAPADN 1552
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 29.3 bits (64), Expect = 6.1 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -3 Query: 285 PTFPRP-PLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 P P+P P ++ + S P P++S P+ T +PK T+P + Sbjct: 84 PATPKPTPPTYTPSPKPKSPVYPPPPKASTPPTYTPSPKP---------PATKPPTYPTP 134 Query: 108 RPPVRSLTMPPTPNIF 61 +PP T PPTP ++ Sbjct: 135 KPPA---TKPPTPPVY 147
>PROML_BRARE (Q9W735) Prominin-like protein (Fragment)| Length = 713 Score = 29.3 bits (64), Expect = 6.1 Identities = 21/83 (25%), Positives = 36/83 (43%) Frame = +2 Query: 146 RKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTN 325 RKNA F DF T++ T ++ GV C ++ N+ G + L+ +N Sbjct: 144 RKNADCFEDFLTTLLLTTTFIITAGVLCAYAANQNLSSQLKGMRR----------LVKSN 193 Query: 326 LPFITTGENKFAVTFDWSVDKLG 394 L + T N+ D+ + + G Sbjct: 194 LKDLHTFANQTPAQIDYLISRYG 216
>RMT2_ASHGO (Q759W1) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 413 Score = 29.3 bits (64), Expect = 6.1 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Frame = +2 Query: 287 AEANLEQWLLPTNLPFI----TTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 436 A A + L T L +I T N+ V DW D + V A IVKN +E Sbjct: 191 ATAAHQDTYLQTELEYIPGALVTKHNRDGVMMDWETDIMRVAAASIVKNREPAE 244
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 7.9 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +2 Query: 44 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 163 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.9 bits (63), Expect = 7.9 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -3 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 28.9 bits (63), Expect = 7.9 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -3 Query: 285 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPL-RWAPR 109 PT + PL E+ TP P S P APK +K+ A L + P +P Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPA 1304 Query: 108 RPPVRSLTMPP 76 R P +L PP Sbjct: 1305 RQPPAALAKPP 1315
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 7.9 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -2 Query: 187 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 65 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,276,492 Number of Sequences: 219361 Number of extensions: 925662 Number of successful extensions: 3842 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3658 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3790 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
