ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22a11 |
|---|---|
| Clone Library Name | barley_pub |
>DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding| protein 1a) (DDB1a) Length = 1088 Score = 250 bits (639), Expect = 1e-66 Identities = 118/132 (89%), Positives = 125/132 (94%) Frame = +3 Query: 84 MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 263 MS+WNYVVTAHKPTSV+HSCVGNFT P +LNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG Sbjct: 1 MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 60 Query: 264 RIATVELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTRSMGDVSDRIGRPYGHGQI 443 RIAT+ELFRPH EAQDFLFIATERYKFCVLQWD E SEL+TR+MGDVSDRIGRP +GQI Sbjct: 61 RIATLELFRPHGEAQDFLFIATERYKFCVLQWDPESSELITRAMGDVSDRIGRPTDNGQI 120 Query: 444 GIIDPDCRLIGL 479 GIIDPDCRLIGL Sbjct: 121 GIIDPDCRLIGL 132
>DDB1_LYCES (Q6QNU4) DNA damage binding protein 1 (UV-damaged DNA-binding| protein 1) (High pigmentation protein 1) Length = 1090 Score = 246 bits (627), Expect = 3e-65 Identities = 114/132 (86%), Positives = 123/132 (93%) Frame = +3 Query: 84 MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 263 MS WNYVVTAHKPT+V+HSCVGNFTGP +LNLI+AKCTRIEIHLLTPQGLQPMLDVPIYG Sbjct: 1 MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60 Query: 264 RIATVELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTRSMGDVSDRIGRPYGHGQI 443 RIAT+ELFRPH E QD LFIATERYKFCVLQWD E SE++TR+MGDVSDRIGRP +GQI Sbjct: 61 RIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIGRPTDNGQI 120 Query: 444 GIIDPDCRLIGL 479 GIIDPDCRLIGL Sbjct: 121 GIIDPDCRLIGL 132
>DDB1_LYCCS (Q6E7D1) DNA damage binding protein 1 (UV-damaged DNA-binding| protein 1) Length = 1095 Score = 239 bits (611), Expect = 2e-63 Identities = 114/137 (83%), Positives = 123/137 (89%), Gaps = 5/137 (3%) Frame = +3 Query: 84 MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQ-----PMLD 248 MS WNYVVTAHKPT+V+HSCVGNFTGP +LNLI+AKCTRIEIHLLTPQGLQ PMLD Sbjct: 1 MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQCICLQPMLD 60 Query: 249 VPIYGRIATVELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTRSMGDVSDRIGRPY 428 VPIYGRIAT+ELFRPH E QD LFIATERYKFCVLQWD E SE++TR+MGDVSDRIGRP Sbjct: 61 VPIYGRIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIGRPT 120 Query: 429 GHGQIGIIDPDCRLIGL 479 +GQIGIIDPDCRLIGL Sbjct: 121 DNGQIGIIDPDCRLIGL 137
>DDB1B_ARATH (O49552) DNA damage binding protein 1b (UV-damaged DNA-binding| protein 1b) (DDB1b) Length = 1088 Score = 231 bits (588), Expect = 1e-60 Identities = 108/132 (81%), Positives = 119/132 (90%) Frame = +3 Query: 84 MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 263 MS WNY VTA KPT V+HSCVGNFT P +LNLIVAK TRIEIHLL+PQGLQ +LDVP+YG Sbjct: 1 MSVWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYG 60 Query: 264 RIATVELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTRSMGDVSDRIGRPYGHGQI 443 RIAT+ELFRPH EAQDFLF+ATERYKFCVLQWD E SEL+TR+MGDVSDRIGRP +GQI Sbjct: 61 RIATMELFRPHGEAQDFLFVATERYKFCVLQWDYESSELITRAMGDVSDRIGRPTDNGQI 120 Query: 444 GIIDPDCRLIGL 479 GIIDPDCR+IGL Sbjct: 121 GIIDPDCRVIGL 132
>DDB1_HUMAN (Q16531) DNA damage-binding protein 1 (Damage-specific DNA-binding| protein 1) (UV-damaged DNA-binding factor) (DDB p127 subunit) (DDBa) (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma pigmentosum group E-complementing protein) (XPCe) Length = 1140 Score = 144 bits (363), Expect = 1e-34 Identities = 68/132 (51%), Positives = 99/132 (75%), Gaps = 2/132 (1%) Frame = +3 Query: 90 TWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRI 269 ++NYVVTA KPT+V+ G+FT LNL++AK TR+EI+++T +GL+P+ +V +YG+I Sbjct: 2 SYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKI 61 Query: 270 ATVELFRPHNEAQDFLFIATERYKFCVLQW--DAEKSELLTRSMGDVSDRIGRPYGHGQI 443 A +ELFRP E++D LFI T +Y C+L++ E +++TR+ G+V DRIGRP G I Sbjct: 62 AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121 Query: 444 GIIDPDCRLIGL 479 GIIDP+CR+IGL Sbjct: 122 GIIDPECRMIGL 133
>DDB1_CERAE (P33194) DNA damage-binding protein 1 (Damage-specific DNA-binding| protein 1) (DDB p127 subunit) (DDBa) (UV-damaged DNA-binding protein 1) (UV-DDB 1) Length = 1140 Score = 142 bits (357), Expect = 6e-34 Identities = 67/132 (50%), Positives = 98/132 (74%), Gaps = 2/132 (1%) Frame = +3 Query: 90 TWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRI 269 ++NYVVTA KPT+V+ +FT LNL++AK TR+EI+++T +GL+P+ +V +YG+I Sbjct: 2 SYNYVVTAQKPTAVNGCVTAHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKI 61 Query: 270 ATVELFRPHNEAQDFLFIATERYKFCVLQW--DAEKSELLTRSMGDVSDRIGRPYGHGQI 443 A +ELFRP E++D LFI T +Y C+L++ E +++TR+ G+V DRIGRP G I Sbjct: 62 AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121 Query: 444 GIIDPDCRLIGL 479 GIIDP+CR+IGL Sbjct: 122 GIIDPECRMIGL 133
>DDB1_SCHPO (O13807) DNA damage-binding protein 1 (Damage-specific DNA-binding| protein 1) Length = 1072 Score = 61.6 bits (148), Expect = 1e-09 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Frame = +3 Query: 99 YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRIATV 278 YV HKP+S+ ++ F N+IVAK +E++ L + I+ +I V Sbjct: 3 YVTYLHKPSSIRNAVFCKFVNASSWNVIVAKVNCLEVYSYENNRLCLITSANIFAKIVNV 62 Query: 279 ELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTR-SMGDVSDRIGRPYGHGQIGIID 455 + F+P + D + +AT+ +++ L WDA + + + D S+R R G + ++D Sbjct: 63 KAFKPVSSPTDHIIVATDSFRYFTLFWDANDNTVSNGIKIQDCSERSLRESQSGPLLLVD 122 Query: 456 PDCRLIGL 479 P R+I L Sbjct: 123 PFQRVICL 130
>RSE1_ASPFU (Q4WLI5) Pre-mRNA-splicing factor rse1| Length = 1225 Score = 45.4 bits (106), Expect = 8e-05 Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 2/89 (2%) Frame = +3 Query: 99 YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 272 Y +T PT+++ + +G F G + ++ A +++ IH P QG + P+ ++G I Sbjct: 10 YSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIYSQDVFGIIR 69 Query: 273 TVELFRPHNEAQDFLFIATERYKFCVLQW 359 T+ FR ++D++ I ++ + ++++ Sbjct: 70 TLAAFRLAGSSKDYIIIGSDSGRITIIEY 98
>RSE1_EMENI (Q5B1X8) Pre-mRNA-splicing factor rse1| Length = 1226 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/89 (23%), Positives = 48/89 (53%), Gaps = 2/89 (2%) Frame = +3 Query: 99 YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 272 Y +T PT+++ + +G F G + ++ A +++ IH P QG + P+ ++G I Sbjct: 10 YSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVIPLYTQDVFGIIR 69 Query: 273 TVELFRPHNEAQDFLFIATERYKFCVLQW 359 T+ FR +D++ I ++ + ++++ Sbjct: 70 TLAAFRLAGSNKDYIIIGSDSGRITIIEY 98
>RSE1_USTMA (Q4PGM6) Pre-mRNA-splicing factor RSE1| Length = 1221 Score = 40.8 bits (94), Expect = 0.002 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%) Frame = +3 Query: 99 YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPI----YGR 266 Y +T SV+ + VG F+G Q +IVAK +R+E LL P +D + +G Sbjct: 7 YNLTLQASGSVNATVVGQFSGTRQQEIIVAKGSRLE--LLRPDTQTGKVDTVLSHDAFGV 64 Query: 267 IATVELFRPHNEAQDFLFIATERYKFCVLQWDAEKSEL 380 I ++ FR ++D++ + ++ + +L++ + + L Sbjct: 65 IRSLAAFRLTGGSKDYVIVGSDSGRIVILEYQPKTNSL 102
>RSE1_NEUCR (Q7RYR4) Pre-mRNA-splicing factor rse-1| Length = 1271 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/89 (23%), Positives = 48/89 (53%), Gaps = 2/89 (2%) Frame = +3 Query: 99 YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 272 Y +T PT+V+ + +G F+G + ++ A +R+ + P QG + +L I+G + Sbjct: 10 YSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIFGIVR 69 Query: 273 TVELFRPHNEAQDFLFIATERYKFCVLQW 359 + FR +D++ +AT+ + ++++ Sbjct: 70 AIASFRLAGSHKDYIILATDSGRITIIEY 98
>RSE1_MAGGR (Q52E49) Pre-mRNA-splicing factor RSE1| Length = 1229 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/89 (21%), Positives = 51/89 (57%), Gaps = 2/89 (2%) Frame = +3 Query: 99 YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 272 Y ++ P++++ + +G F+G + ++ A +R+ ++ P QG + P++ ++G I Sbjct: 10 YSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLMSHDVFGIIR 69 Query: 273 TVELFRPHNEAQDFLFIATERYKFCVLQW 359 + FR ++D+L IA++ + ++++ Sbjct: 70 DLASFRLAGSSKDYLIIASDSGRITIVEY 98
>RIK1_SCHPO (Q10426) Silencing protein rik1| Length = 1040 Score = 34.7 bits (78), Expect = 0.13 Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +3 Query: 177 LIVAKCTRIEIHLLTP-QGLQPMLDVPIYGRIATVELFRPHNEAQDFLFIATERYKFCVL 353 L++ + +I I+L + GLQ +P++ + + +RP +D+LF+ + + Sbjct: 28 LVLLQALKINIYLCSEVHGLQFFTSIPLFSTVKHIRPYRPPGLDRDYLFVVLNDDTYFSI 87 Query: 354 QWDAEKSELL 383 WD + +++ Sbjct: 88 YWDEDYQKVI 97
>RSE1_CRYNE (Q5KP25) Pre-mRNA-splicing factor RSE1| Length = 1217 Score = 34.7 bits (78), Expect = 0.13 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%) Frame = +3 Query: 105 VTAHKPTSVSHSCVGNFTG-PHQLNLIVAKCTRIEIHLL--TPQGLQPMLDVPIYGRIAT 275 +T PT+VS + VG+F+G Q L V T++EI L T L ++ +G I Sbjct: 6 LTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAFGTIRN 65 Query: 276 VELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTRSMGDVSDRIG-RPYGHGQIGII 452 + FR +D++ ++ + +L++ + +V + G R GQ + Sbjct: 66 IAGFRLAGMTKDYILATSDSGRLSILEFVISPTPHFESLYQEVFGKSGSRRIVPGQFLAV 125 Query: 453 DPDCR 467 DP R Sbjct: 126 DPKGR 130
>YR648_MIMIV (Q5UR09) Hypothetical protein R648| Length = 400 Score = 32.7 bits (73), Expect = 0.51 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 8/133 (6%) Frame = +3 Query: 96 NYVVTAHKPTSVSHSCVGNFTGPH----QLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 263 N + PT ++ +C GNF + + L + +H PQ + P++ + Sbjct: 135 NIAQNSSYPTGIAINCTGNFATTNGTLTKSGLFLTCSEHGTVHSYNPQ-VDPLVSFLVLN 193 Query: 264 RIAT--VELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTRSM--GDVSDRIGRPYG 431 T + +FR A D L++A + ++ ++ +D+ + LL GD SD I P Sbjct: 194 EQLTGEIHVFRGLAVAGDVLYLA-DFFQSKIMVFDSNYNRLLGFPFVDGDTSDPI--PIS 250 Query: 432 HGQIGIIDPDCRL 470 +G I++ C L Sbjct: 251 YGPTNIVNIGCYL 263
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 32.3 bits (72), Expect = 0.66 Identities = 27/77 (35%), Positives = 38/77 (49%) Frame = +1 Query: 247 TCPYMGGSRRSSSSALTMRPRTSSSLPRRGTSSASCSGTQKNQSFSLDPWEMFLIASAAP 426 T Y + +SSS+LT SSSL TSS+S + + N + S P L +S+A Sbjct: 60 TTSYNYNTSSASSSSLTSSSAASSSL----TSSSSLASSSTNSTTSASPTSSSLTSSSAT 115 Query: 427 TDMDRLGSSTLTVDLLA 477 + L SS+ T LA Sbjct: 116 S--SSLASSSTTSSSLA 130
>Y066_METJA (Q60377) Hypothetical protein MJ0066| Length = 480 Score = 31.2 bits (69), Expect = 1.5 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Frame = -3 Query: 440 LSMSVGAADAIRNISHGSSEKL*FFCVPLQDAELVPLRGNEEEVLGLIVRAEE--LDRRD 267 + ++V +++ I+N+ G K+ FF +D + + N EE L+VRA E +D + Sbjct: 181 VGLAVVSSEDIKNMEKGKVVKVRFFIKDNEDYKPGKIYDNLEEAFDLMVRANEGVIDNYE 240 Query: 266 PPIYGHVQHRLEALRR 219 G +++ E +++ Sbjct: 241 RNAIGFIKNTYEKIKK 256
>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2365 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = -3 Query: 353 QDAELVPLRGNEEEVLGLIVRAEELDRRDPPIYGH--VQHRLEALRRE 216 Q+ E +PLR N+ L ++ +RR PP GH ++ ++ALR + Sbjct: 2031 QELEKLPLRENKRVPLTALLNQSRGERRGPPSDGHEALEKEVQALRAQ 2078
>OGT_MYCTU (P0A696) Methylated-DNA--protein-cysteine methyltransferase (EC| 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) Length = 165 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 9/40 (22%) Frame = +3 Query: 384 TRSMGDVSDRIGRP---------YGHGQIGIIDPDCRLIG 476 TRS G+++D+IG P GH I II P R+IG Sbjct: 92 TRSYGEIADQIGAPGAARAVGLANGHNPIAIIVPCHRVIG 131
>OGT_MYCBO (P0A697) Methylated-DNA--protein-cysteine methyltransferase (EC| 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) Length = 165 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 9/40 (22%) Frame = +3 Query: 384 TRSMGDVSDRIGRP---------YGHGQIGIIDPDCRLIG 476 TRS G+++D+IG P GH I II P R+IG Sbjct: 92 TRSYGEIADQIGAPGAARAVGLANGHNPIAIIVPCHRVIG 131
>SNX41_SCHPO (O60107) Sorting nexin-41| Length = 586 Score = 29.6 bits (65), Expect = 4.3 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 253 PYMGGSRRSSSSALTMRPRTSSSLPRRGTSSASCSGTQKNQSF 381 P+ G RS+SSA+ + P+ S + +S + +Q N+SF Sbjct: 9 PFSGSDNRSASSAVNVEPKVEPSQHQGSSSVKENAISQPNESF 51
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 Query: 250 CPYMGGSRRSSSSALTMRPRTSSSLPRRGTSSAS 351 CP GGS ++ SA T T++ PRR +S+AS Sbjct: 1142 CPGEGGSTATTPSAATTPSITATPSPRRRSSAAS 1175
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 Query: 250 CPYMGGSRRSSSSALTMRPRTSSSLPRRGTSSAS 351 CP GGS ++ SA T T++ PRR +S+AS Sbjct: 1142 CPGEGGSTATTPSAATTPSITATPSPRRRSSAAS 1175
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 Query: 250 CPYMGGSRRSSSSALTMRPRTSSSLPRRGTSSAS 351 CP GGS ++ SA T T++ PRR +S+AS Sbjct: 1148 CPGEGGSAATTPSAATTPSITATPSPRRRSSAAS 1181
>PKHD1_HUMAN (Q8TCZ9) Polycystic kidney and hepatic disease 1 precursor| (Fibrocystin) (Polyductin) (Tigmin) Length = 4074 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -3 Query: 362 VPLQDAELVPLRGNEEEVLGLIVRAEELDRRDPPIYGHVQHRL 234 +PL A VP G EE ++V + R PP+ GH + +L Sbjct: 754 LPLITARSVPTEGTEEGSGLVLVTTQRRQRTSPPLGGHFRIQL 796
>CLPB_CHLPN (Q7AJA9) Chaperone clpB| Length = 866 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = -3 Query: 338 VPLRGNEEEVLGLIVRAEELDRRDPPIYGH----VQHRLEALRREEVDLDAG 195 +P+ E E+ LIV+ E + R P Y +Q ++ALR E L G Sbjct: 409 LPIDEKERELAALIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLG 460
>KCC4_YEAST (P25389) Probable serine/threonine-protein kinase KCC4 (EC| 2.7.11.1) Length = 1037 Score = 28.9 bits (63), Expect = 7.3 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Frame = +1 Query: 268 SRRSSSSALTMRPRTSSSLPRRGTS---SASCSGTQKNQSFSLDPWEMFLIASAAPTD 432 S SSSS+L + R+ S PRR TS S S ++K SF L S+ PTD Sbjct: 389 STLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLL---------SSNPTD 437
>GPDA_TROW8 (Q83I37) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 325 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -3 Query: 452 DDPNLSMSVGAADAIRNISHGSSEKL*FFCVPLQDAELVPLRGNEEEVLGLI 297 D+P++S+ A A NI G+ + F+C+P D + V + + ++ LI Sbjct: 148 DEPSVSVVASANIATANIVAGTLKCPGFYCIPSSDIKGVEICAASKNLVALI 199
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/65 (27%), Positives = 31/65 (47%) Frame = +1 Query: 268 SRRSSSSALTMRPRTSSSLPRRGTSSASCSGTQKNQSFSLDPWEMFLIASAAPTDMDRLG 447 S+ S++S + +++S TSS+S S + + + S S APT L Sbjct: 345 SKTSTTSTTSSSISSTTSSTTSSTSSSSTSSSTSSTTSSSTTSSQISTTSTAPTSSTSLS 404 Query: 448 SSTLT 462 SST++ Sbjct: 405 SSTIS 409
>GPDA_TROWT (Q83G27) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 339 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -3 Query: 452 DDPNLSMSVGAADAIRNISHGSSEKL*FFCVPLQDAELVPLRGNEEEVLGLI 297 D+P++S+ A A NI G+ + F+C+P D + V + + ++ LI Sbjct: 162 DEPSVSVVASANIATANIVAGTLKCPGFYCIPSSDIKGVEICAASKNLVALI 213
>CPSF1_DROME (Q9V726) Cleavage and polyadenylation specificity factor, 160 kDa| subunit (CPSF 160 kDa subunit) (CPSF-160) (dCPSF) Length = 1455 Score = 28.5 bits (62), Expect = 9.6 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 20/114 (17%) Frame = +3 Query: 114 HKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-------QGLQP----------- 239 H T+V S F NL+VA ++++ + P Q L P Sbjct: 9 HSATAVEFSIACRFFNNLDENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMRL 68 Query: 240 --MLDVPIYGRIATVELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTRSM 395 + +YG + +++ +D L I+ + K VLQ D + L T S+ Sbjct: 69 ECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSL 122
>FCMD_HUMAN (O75072) Fukutin (EC 2.-.-.-) (Fukuyama-type congenital muscular| dystrophy protein) Length = 461 Score = 28.5 bits (62), Expect = 9.6 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -3 Query: 416 DAIRNISHGSSEKL*FFCVP 357 + ++N SHGS+ + FFCVP Sbjct: 88 EQVKNTSHGSTSQCKFFCVP 107 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.127 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,446,092 Number of Sequences: 219361 Number of extensions: 1092832 Number of successful extensions: 3972 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3658 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3889 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
