ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22a07 |
|---|---|
| Clone Library Name | barley_pub |
>CFI_MAIZE (Q08704) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 231 Score = 161 bits (407), Expect = 9e-40 Identities = 80/114 (70%), Positives = 90/114 (78%) Frame = +2 Query: 125 VVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXXXXXXXXXX 304 VVFPP+ARPPGSA +HFL GAGVRG+EIGG+FIKFTAIGVYL+ Sbjct: 11 VVFPPVARPPGSAGSHFLGGAGVRGVEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTAD 70 Query: 305 XXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYT 466 SDAAFFRDVVTG+FEKFTRVTMILPLTG QY++KVTENCVA+WKAAG+YT Sbjct: 71 ELA-SDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWKAAGLYT 123
>CFI_VITVI (P51117) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 234 Score = 139 bits (351), Expect = 3e-33 Identities = 69/123 (56%), Positives = 85/123 (69%) Frame = +2 Query: 98 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXX 277 +V+ ++V+ V+FPP +PPGS + FL GAGVRG+EI G F+KFTAIGVYL+ Sbjct: 6 SVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLA 65 Query: 278 XXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAG 457 S FFRDVVTG FEKFT+VT ILPLTG QYSDKV+ENCVA+WK+ G Sbjct: 66 VKWKGKTVEELADS-VDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVG 124 Query: 458 VYT 466 +YT Sbjct: 125 IYT 127
>CFI_ELAUM (O65333) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 256 Score = 137 bits (346), Expect = 1e-32 Identities = 69/125 (55%), Positives = 85/125 (68%) Frame = +2 Query: 92 TMAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXX 271 T +V+E++V+ V+FPP +PPGS+ FL GAGVRG+EI G FIKFTAIGVYL+ Sbjct: 5 TKSVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPS 64 Query: 272 XXXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKA 451 S FFRD+VTG EKFTRVT ILPLTG QYS+KV+ENCVA WK+ Sbjct: 65 LAVKWKGKSAQELTES-VEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKS 123 Query: 452 AGVYT 466 G+Y+ Sbjct: 124 LGIYS 128
>CFI_DIACA (Q43754) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 221 Score = 133 bits (335), Expect = 2e-31 Identities = 65/122 (53%), Positives = 81/122 (66%) Frame = +2 Query: 101 VSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXX 280 +++++V+ VFPP +PPGS FL GAGVRG+EI G FIKFTAI VY++ Sbjct: 4 ITQIQVESHVFPPEVKPPGSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAV 63 Query: 281 XXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGV 460 S FF+D+VTG FEKFT+VTMILPLTG QYS+KV ENCVA+WK+ G Sbjct: 64 KWKGKTADELTDS-VDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGT 122 Query: 461 YT 466 YT Sbjct: 123 YT 124
>CFI_CALCH (Q42663) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (Fragment) Length = 237 Score = 132 bits (332), Expect = 4e-31 Identities = 67/125 (53%), Positives = 81/125 (64%) Frame = +2 Query: 92 TMAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXX 271 T + L+V+ +VFP +PPGS ++ FL GAGVRGMEI G+F+KFT IGVYL+ Sbjct: 4 TPLTTGLQVESIVFPSSVKPPGSTNSLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPL 63 Query: 272 XXXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKA 451 S FFRD+VTG FEKFT+VTMILPLTG QYS+KV+E CV WKA Sbjct: 64 LAAKRKGKTVAELLDS-VEFFRDIVTGPFEKFTQVTMILPLTGKQYSEKVSEMCVGVWKA 122 Query: 452 AGVYT 466 G YT Sbjct: 123 LGTYT 127
>CFI_IPOPU (O22604) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 241 Score = 132 bits (331), Expect = 6e-31 Identities = 65/121 (53%), Positives = 80/121 (66%) Frame = +2 Query: 101 VSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXX 280 V+E++V+ VFP +PPG+A L GAG RG+ I G F+KFTAIGVYL+ Sbjct: 7 VAEVKVESYVFPATVKPPGTAKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAV 66 Query: 281 XXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGV 460 S FFRD+VTG FEK TR+TMILPL+G QYS+KVTENCVA+WKAAG+ Sbjct: 67 KWNGKSVEELTDS-VQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVTENCVAFWKAAGM 125 Query: 461 Y 463 Y Sbjct: 126 Y 126
>CFIA_PETHY (P11650) Chalcone--flavonone isomerase A (EC 5.5.1.6) (Chalcone| isomerase A) Length = 241 Score = 130 bits (328), Expect = 1e-30 Identities = 67/124 (54%), Positives = 80/124 (64%) Frame = +2 Query: 95 MAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXX 274 ++V++++V+ F P P GS + FLAGAG RG+EI G F+KFTAIGVYL+ Sbjct: 5 VSVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFL 64 Query: 275 XXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAA 454 S FFRDVVTG FEKFTRVTMILPLTG QYS+KV ENCVA+WK Sbjct: 65 AEKWKGKTPQELTDS-VEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGI 123 Query: 455 GVYT 466 G YT Sbjct: 124 GTYT 127
>CFIB_PETHY (P11651) Chalcone--flavonone isomerase B (EC 5.5.1.6) (Chalcone| isomerase B) Length = 220 Score = 125 bits (315), Expect = 4e-29 Identities = 61/125 (48%), Positives = 80/125 (64%) Frame = +2 Query: 92 TMAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXX 271 +++V++++V+ VFPP +PP S FL GAG RG+++ G F+KFT IGVYL+ Sbjct: 4 SVSVTKVQVENYVFPPTVKPPASTKTLFLGGAGHRGLDVEGKFVKFTVIGVYLEESAVQF 63 Query: 272 XXXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKA 451 S FFRD+VTG FEKFTRV ILPLTG Q+S+KV ENCVA+WKA Sbjct: 64 LAPKWKGKSAEELIHS-VDFFRDIVTGPFEKFTRVRFILPLTGKQFSEKVAENCVAHWKA 122 Query: 452 AGVYT 466 G Y+ Sbjct: 123 TGTYS 127
>CHI_ARALP (Q9LKC3) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 244 Score = 123 bits (309), Expect = 2e-28 Identities = 62/123 (50%), Positives = 79/123 (64%) Frame = +2 Query: 98 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXX 277 +V++L+VD V F P + P S++ FL GAGVRG++I G F+ FT IGVYL+ Sbjct: 13 SVTKLQVDSVTFDPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSLS 72 Query: 278 XXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAG 457 S FFR++VTG FEKF +VTM LPLTG QYS+KVTENCVA WK+ G Sbjct: 73 VKWKGKTTEELSES-VPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLG 131 Query: 458 VYT 466 +YT Sbjct: 132 IYT 134
>CFI_ARATH (P41088) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (TRANSPARENT TESTA 5 protein) Length = 246 Score = 121 bits (303), Expect = 1e-27 Identities = 63/123 (51%), Positives = 77/123 (62%) Frame = +2 Query: 98 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXX 277 AV++L VD V F P + P S++ FL GAGVRG++I G F+ FT IGVYL+ Sbjct: 15 AVTKLHVDSVTFVPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLS 74 Query: 278 XXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAG 457 S FFR++VTG FEKF +VTM LPLTG QYS+KVTENCVA WK G Sbjct: 75 VKWKGKTTEELTES-IPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKQLG 133 Query: 458 VYT 466 +YT Sbjct: 134 LYT 136
>CFI_RAPSA (O22651) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 247 Score = 120 bits (300), Expect = 2e-27 Identities = 62/120 (51%), Positives = 74/120 (61%) Frame = +2 Query: 107 ELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXXXX 286 +L+VD V FPP P S++ FL GAGVRG+EI G F+ FT IGVYL Sbjct: 15 KLQVDSVTFPPSVISPASSNTLFLGGAGVRGLEIQGKFVIFTVIGVYLDPVSVPSLSVKW 74 Query: 287 XXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYT 466 S FFR++V G FEKF +VTM LPLTG QYS+KVTENCVA WK+ G+YT Sbjct: 75 EGKTTEELTES-VPFFREIVIGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYT 133
>CFI_PUELO (Q43056) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 224 Score = 98.2 bits (243), Expect = 9e-21 Identities = 50/121 (41%), Positives = 69/121 (57%) Frame = +2 Query: 101 VSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXX 280 +S ++V+ + FP + P S +FL GAG RG+ I G FIKFT IGVYL+ Sbjct: 10 ISAVQVEFLEFPAVVTSPASGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAA 69 Query: 281 XXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGV 460 + F+RD+++G FEK R + ILPL+G +YS KV ENCVA+ K+ G Sbjct: 70 KWKGKPSEELVET-LDFYRDIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGT 128 Query: 461 Y 463 Y Sbjct: 129 Y 129
>CFI_PHAVU (P14298) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 221 Score = 95.5 bits (236), Expect = 6e-20 Identities = 49/121 (40%), Positives = 71/121 (58%) Frame = +2 Query: 101 VSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXX 280 +++++V+ + FP + P +A +FL GAG RG+ I G FIKFTAIGVYL+ Sbjct: 7 ITDVQVEFLHFPAVVTSPATAKTYFLGGAGERGLTIEGKFIKFTAIGVYLE-DKAVASLA 65 Query: 281 XXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGV 460 + F+RD+++G FEK R + IL L+G +YS KV ENCVA+ K+ G Sbjct: 66 TKWKGKPSEELINTLDFYRDIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGT 125 Query: 461 Y 463 Y Sbjct: 126 Y 126
>CFI1_MEDSA (P28012) Chalcone--flavonone isomerase 1 (EC 5.5.1.6) (Chalcone| isomerase 1) Length = 222 Score = 90.9 bits (224), Expect = 1e-18 Identities = 46/122 (37%), Positives = 70/122 (57%) Frame = +2 Query: 98 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXX 277 +++ + V+ + +P + P + ++FL GAG RG+ I G+FIKFTAIGVYL+ Sbjct: 4 SITAITVENLEYPAVVTSPVTGKSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLA 63 Query: 278 XXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAG 457 + F+RD+++G FEK R + I L+G +YS KV ENCVA+ K+ G Sbjct: 64 AKWKGKSSEELLET-LDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVG 122 Query: 458 VY 463 Y Sbjct: 123 TY 124
>CFI_PEA (P41089) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 223 Score = 84.7 bits (208), Expect = 1e-16 Identities = 46/111 (41%), Positives = 60/111 (54%) Frame = +2 Query: 131 FPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXXXXXXXXXXXX 310 FP + P + + FL GAG RG+ I G FIKFT IGVYL+ Sbjct: 17 FPAVVTSPVTENHIFLGGAGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKLEELL 76 Query: 311 XXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVY 463 D F+RD+++G FEK R + I L+G +YS KV ENCVA+ K+ G Y Sbjct: 77 ETLD--FYRDIISGPFEKLIRRSKIKELSGPEYSRKVMENCVAHLKSVGTY 125
>CFI2_MEDSA (P28013) Chalcone--flavonone isomerase 2 (EC 5.5.1.6) (Chalcone| isomerase 2) (Fragment) Length = 197 Score = 82.4 bits (202), Expect = 5e-16 Identities = 43/99 (43%), Positives = 58/99 (58%) Frame = +2 Query: 167 AHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXXXXXXXXXXXXXXSDAAFFRDVV 346 ++FL GAG RG+ I G+FIKFTAIGVYL+ + F+RD++ Sbjct: 2 SYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLET-LDFYRDII 60 Query: 347 TGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVY 463 +G FEK R + I L+G +YS KV ENCVA+ K+ G Y Sbjct: 61 SGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTY 99
>CFI_SOYBN (O81980) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (Fragment) Length = 172 Score = 62.4 bits (150), Expect = 6e-10 Identities = 32/79 (40%), Positives = 43/79 (54%) Frame = +2 Query: 227 FTAIGVYLQXXXXXXXXXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMILPLTGAQ 406 +T IGVYL+ + F+RD+++G FEK R + ILPL GA+ Sbjct: 1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHT-LHFYRDIISGPFEKLIRGSKILPLAGAE 59 Query: 407 YSDKVTENCVAYWKAAGVY 463 YS KV ENCVA+ K+ G Y Sbjct: 60 YSKKVMENCVAHMKSVGTY 78
>FA53C_MOUSE (Q8BXQ8) Protein FAM53C| Length = 393 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -3 Query: 252 CRYTPMAVNLMKWPPISIPRTPAPARKWAWAEPGGRASGG 133 CR + V+L +W P+ PAP++ W + G A GG Sbjct: 118 CRSLSVPVDLSRWQPVW---RPAPSKLWTPIKHRGNAGGG 154
>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2| Length = 913 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +3 Query: 3 PVRPRLARSHPPTPAPIVCSLRAIRPSIHIP 95 PV+P +A P PAP+ +A +P IH P Sbjct: 59 PVQPVVAAPKPAAPAPVAARPQAPQPRIHQP 89
>DUS8_HUMAN (Q13202) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC| 3.1.3.16) (Dual specificity protein phosphatase hVH-5) Length = 625 Score = 29.6 bits (65), Expect = 4.0 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = -3 Query: 213 PPISIPRTPAPARKWAWAEPGGRASGG 133 PP+ P TP+P W ++ G + +GG Sbjct: 510 PPLDSPGTPSPDGPWCFSPEGAQGAGG 536
>FAS_CHICK (P12276) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 9/55 (16%) Frame = +2 Query: 44 CPHRLLATCHPSVDTHTMA---------VSELEVDGVVFPPLARPPGSAHAHFLA 181 CP ++ CH S DT T++ V++L+ DGV + R + H++++A Sbjct: 632 CPPNVVPACHNSEDTVTVSGPLDSVSEFVTKLKKDGVFAKEVRRAGVAFHSYYMA 686
>IF2_TREPA (O83861) Translation initiation factor IF-2| Length = 842 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -2 Query: 115 LQLRHGHGMCIDGRMARSEQTMGAGVGGCDLARRG 11 ++LR +G C +GR+ S G G+ + RRG Sbjct: 494 MELRANYGCCAEGRIIESRIDHGRGIVASVIVRRG 528
>GRP3_DAUCA (P37705) Glycine-rich protein A3| Length = 195 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +2 Query: 131 FPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVY 247 +PP GS+ H GV GM GG A GV+ Sbjct: 81 YPPAGHHSGSSAPHHSGHGGVAGMVAGGRAAAAAAYGVH 119 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,791,697 Number of Sequences: 219361 Number of extensions: 658787 Number of successful extensions: 2709 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 2593 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2692 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
