ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22a07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470129.1| Oryza sativa (japonica cultivar-group), mRNA Length = 916 Score = 442 bits (223), Expect = e-121 Identities = 334/371 (90%) Strand = Plus / Plus Query: 97 ggccgtgtcggagctggaggtcgacggcgtcgtcttcccgccgctcgcccgcccgccggg 156 ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||| Sbjct: 89 ggccgtgtcggaggtggaggtcgacggcgtcgtgttcccgccggtggcccgcccgccggg 148 Query: 157 ctccgcccacgcccacttcctcgccggcgcaggcgtgcgcgggatggagatcggcggcca 216 ||||| ||||||||||||||||||||||||||| ||| | || ||||||||| |||| | Sbjct: 149 ctccggccacgcccacttcctcgccggcgcaggtgtgaggggagtggagatcgccggcaa 208 Query: 217 cttcatcaagttcacggccatcggcgtgtacctgcaggccgacgccgccgtctccgcgct 276 |||||||||||||||||||||||||||||||||| ||| | ||| ||||| | ||||| Sbjct: 209 cttcatcaagttcacggccatcggcgtgtacctggaggagggcgcggccgtgccggcgct 268 Query: 277 cgccgccaagtgggccggcaagcccgccgccgatctcgcctccgacgccgccttcttccg 336 ||| ||||||||||||||| |||||| ||| |||||| ||||||||||||||||||| Sbjct: 269 ggccaagaagtgggccggcaagtccgccgacgagctcgccgccgacgccgccttcttccg 328 Query: 337 cgacgtcgtcaccggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgac 396 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || Sbjct: 329 cgacgtcgtcaccggcgatttcgagaagttcacgagggtgacgatgatcctgccgctcac 388 Query: 397 gggcgcgcagtactcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccgg 456 |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 389 cggcgagcagtactcggacaaggtgacggagaactgcgtcgcggcgtggaaggccgccgg 448 Query: 457 cgtgtacacgg 467 ||||||||||| Sbjct: 449 cgtgtacacgg 459
>dbj|AK104791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F07, full insert sequence Length = 834 Score = 442 bits (223), Expect = e-121 Identities = 334/371 (90%) Strand = Plus / Plus Query: 97 ggccgtgtcggagctggaggtcgacggcgtcgtcttcccgccgctcgcccgcccgccggg 156 ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||| Sbjct: 33 ggccgtgtcggaggtggaggtcgacggcgtcgtgttcccgccggtggcccgcccgccggg 92 Query: 157 ctccgcccacgcccacttcctcgccggcgcaggcgtgcgcgggatggagatcggcggcca 216 ||||| ||||||||||||||||||||||||||| ||| | || ||||||||| |||| | Sbjct: 93 ctccggccacgcccacttcctcgccggcgcaggtgtgaggggagtggagatcgccggcaa 152 Query: 217 cttcatcaagttcacggccatcggcgtgtacctgcaggccgacgccgccgtctccgcgct 276 |||||||||||||||||||||||||||||||||| ||| | ||| ||||| | ||||| Sbjct: 153 cttcatcaagttcacggccatcggcgtgtacctggaggagggcgcggccgtgccggcgct 212 Query: 277 cgccgccaagtgggccggcaagcccgccgccgatctcgcctccgacgccgccttcttccg 336 ||| ||||||||||||||| |||||| ||| |||||| ||||||||||||||||||| Sbjct: 213 ggccaagaagtgggccggcaagtccgccgacgagctcgccgccgacgccgccttcttccg 272 Query: 337 cgacgtcgtcaccggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgac 396 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || Sbjct: 273 cgacgtcgtcaccggcgatttcgagaagttcacgagggtgacgatgatcctgccgctcac 332 Query: 397 gggcgcgcagtactcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccgg 456 |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 333 cggcgagcagtactcggacaaggtgacggagaactgcgtcgcggcgtggaaggccgccgg 392 Query: 457 cgtgtacacgg 467 ||||||||||| Sbjct: 393 cgtgtacacgg 403
>dbj|AK061390.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C05, full insert sequence Length = 877 Score = 442 bits (223), Expect = e-121 Identities = 334/371 (90%) Strand = Plus / Plus Query: 97 ggccgtgtcggagctggaggtcgacggcgtcgtcttcccgccgctcgcccgcccgccggg 156 ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||| Sbjct: 63 ggccgtgtcggaggtggaggtcgacggcgtcgtgttcccgccggtggcccgcccgccggg 122 Query: 157 ctccgcccacgcccacttcctcgccggcgcaggcgtgcgcgggatggagatcggcggcca 216 ||||| ||||||||||||||||||||||||||| ||| | || ||||||||| |||| | Sbjct: 123 ctccggccacgcccacttcctcgccggcgcaggtgtgaggggagtggagatcgccggcaa 182 Query: 217 cttcatcaagttcacggccatcggcgtgtacctgcaggccgacgccgccgtctccgcgct 276 |||||||||||||||||||||||||||||||||| ||| | ||| ||||| | ||||| Sbjct: 183 cttcatcaagttcacggccatcggcgtgtacctggaggagggcgcggccgtgccggcgct 242 Query: 277 cgccgccaagtgggccggcaagcccgccgccgatctcgcctccgacgccgccttcttccg 336 ||| ||||||||||||||| |||||| ||| |||||| ||||||||||||||||||| Sbjct: 243 ggccaagaagtgggccggcaagtccgccgacgagctcgccgccgacgccgccttcttccg 302 Query: 337 cgacgtcgtcaccggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgac 396 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || Sbjct: 303 cgacgtcgtcaccggcgatttcgagaagttcacgagggtgacgatgatcctgccgctcac 362 Query: 397 gggcgcgcagtactcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccgg 456 |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 363 cggcgagcagtactcggacaaggtgacggagaactgcgtcgcggcgtggaaggccgccgg 422 Query: 457 cgtgtacacgg 467 ||||||||||| Sbjct: 423 cgtgtacacgg 433
>gb|AY108508.1| Zea mays PCO128559 mRNA sequence Length = 1173 Score = 389 bits (196), Expect = e-105 Identities = 330/374 (88%), Gaps = 3/374 (0%) Strand = Plus / Plus Query: 94 catggccgtgtcggagctggaggtcgacggcgtcgtcttcccgccgctcgcccgcccgcc 153 |||||||||| ||||| ||| ||||||||||||||||||||||||| | ||||||||||| Sbjct: 149 catggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgcc 208 Query: 154 gggctccgcccacgcccacttcctcgccggcgcaggcgtgcgcgggatggagatcggcgg 213 |||||||||| | | |||||||||| ||||||||||||||| || | |||||||| || Sbjct: 209 gggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggagg 268 Query: 214 ccacttcatcaagttcacggccatcggcgtgtacctgcaggccgacgccgccgtctccgc 273 | ||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||| Sbjct: 269 caacttcatcaagttcacggccatcggcgtgtacctggagg---acgcggccgtgcccgc 325 Query: 274 gctcgccgccaagtgggccggcaagcccgccgccgatctcgcctccgacgccgccttctt 333 ||| ||| ||||||| ||||||| | |||| ||| ||||||||||||||||||||||| Sbjct: 326 gctggccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttctt 385 Query: 334 ccgcgacgtcgtcaccggcgagttcgagaagttcacgagggtgacaatgatcctgccgct 393 ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 386 ccgcgacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgct 445 Query: 394 gacgggcgcgcagtactcggacaaggtgacggagaactgtgtcgcgtactggaaggccgc 453 |||||||| ||||||| |||| || |||||||||||||| || |||| |||||||||||| Sbjct: 446 gacgggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggccgc 505 Query: 454 cggcgtgtacacgg 467 |||| ||||||||| Sbjct: 506 cggcctgtacacgg 519
>gb|AF474923.1| Hordeum vulgare subsp. vulgare chalcone isomerase (CHI) gene, complete cds Length = 11475 Score = 375 bits (189), Expect = e-101 Identities = 189/189 (100%) Strand = Plus / Plus Query: 1 atcccgtgcgcccacgcctcgctagatcgcacccacctacccctgcccccatcgtctgct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6843 atcccgtgcgcccacgcctcgctagatcgcacccacctacccctgcccccatcgtctgct 6902 Query: 61 cgctacgtgccatccgtccgtcgatacacataccatggccgtgtcggagctggaggtcga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6903 cgctacgtgccatccgtccgtcgatacacataccatggccgtgtcggagctggaggtcga 6962 Query: 121 cggcgtcgtcttcccgccgctcgcccgcccgccgggctccgcccacgcccacttcctcgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6963 cggcgtcgtcttcccgccgctcgcccgcccgccgggctccgcccacgcccacttcctcgc 7022 Query: 181 cggcgcagg 189 ||||||||| Sbjct: 7023 cggcgcagg 7031 Score = 335 bits (169), Expect = 8e-89 Identities = 169/169 (100%) Strand = Plus / Plus Query: 183 gcgcaggcgtgcgcgggatggagatcggcggccacttcatcaagttcacggccatcggcg 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7145 gcgcaggcgtgcgcgggatggagatcggcggccacttcatcaagttcacggccatcggcg 7204 Query: 243 tgtacctgcaggccgacgccgccgtctccgcgctcgccgccaagtgggccggcaagcccg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7205 tgtacctgcaggccgacgccgccgtctccgcgctcgccgccaagtgggccggcaagcccg 7264 Query: 303 ccgccgatctcgcctccgacgccgccttcttccgcgacgtcgtcaccgg 351 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7265 ccgccgatctcgcctccgacgccgccttcttccgcgacgtcgtcaccgg 7313 Score = 234 bits (118), Expect = 2e-58 Identities = 118/118 (100%) Strand = Plus / Plus Query: 350 ggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgacgggcgcgcagtac 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7392 ggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgacgggcgcgcagtac 7451 Query: 410 tcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccggcgtgtacacgg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7452 tcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccggcgtgtacacgg 7509
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 163 bits (82), Expect = 6e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 350 ggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgacgggcgcgcagtac 409 ||||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 34091264 ggcgatttcgagaagttcacgagggtgacgatgatcctgccgctcaccggcgagcagtac 34091205 Query: 410 tcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccggcgtgtacacgg 467 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 34091204 tcggacaaggtgacggagaactgcgtcgcggcgtggaaggccgccggcgtgtacacgg 34091147 Score = 157 bits (79), Expect = 4e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 201 tggagatcggcggccacttcatcaagttcacggccatcggcgtgtacctgcaggccgacg 260 ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 34091489 tggagatcgccggcaacttcatcaagttcacggccatcggcgtgtacctggaggagggcg 34091430 Query: 261 ccgccgtctccgcgctcgccgccaagtgggccggcaagcccgccgccgatctcgcctccg 320 | ||||| | ||||| ||| ||||||||||||||| |||||| ||| |||||| ||| Sbjct: 34091429 cggccgtgccggcgctggccaagaagtgggccggcaagtccgccgacgagctcgccgccg 34091370 Query: 321 acgccgccttcttccgcgacgtcgtcaccgg 351 ||||||||||||||||||||||||||||||| Sbjct: 34091369 acgccgccttcttccgcgacgtcgtcaccgg 34091339 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Minus Query: 97 ggccgtgtcggagctggaggtcgacggcgtcgtcttcccgccgctcgcccgcccgccggg 156 ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||| Sbjct: 34091690 ggccgtgtcggaggtggaggtcgacggcgtcgtgttcccgccggtggcccgcccgccggg 34091631 Query: 157 ctccgcccacgcccacttcctcgccggcgcagg 189 ||||| ||||||||||||||||||||||||||| Sbjct: 34091630 ctccggccacgcccacttcctcgccggcgcagg 34091598
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 163 bits (82), Expect = 6e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 350 ggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgacgggcgcgcagtac 409 ||||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 34181736 ggcgatttcgagaagttcacgagggtgacgatgatcctgccgctcaccggcgagcagtac 34181677 Query: 410 tcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccggcgtgtacacgg 467 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 34181676 tcggacaaggtgacggagaactgcgtcgcggcgtggaaggccgccggcgtgtacacgg 34181619 Score = 157 bits (79), Expect = 4e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 201 tggagatcggcggccacttcatcaagttcacggccatcggcgtgtacctgcaggccgacg 260 ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 34181961 tggagatcgccggcaacttcatcaagttcacggccatcggcgtgtacctggaggagggcg 34181902 Query: 261 ccgccgtctccgcgctcgccgccaagtgggccggcaagcccgccgccgatctcgcctccg 320 | ||||| | ||||| ||| ||||||||||||||| |||||| ||| |||||| ||| Sbjct: 34181901 cggccgtgccggcgctggccaagaagtgggccggcaagtccgccgacgagctcgccgccg 34181842 Query: 321 acgccgccttcttccgcgacgtcgtcaccgg 351 ||||||||||||||||||||||||||||||| Sbjct: 34181841 acgccgccttcttccgcgacgtcgtcaccgg 34181811 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Minus Query: 97 ggccgtgtcggagctggaggtcgacggcgtcgtcttcccgccgctcgcccgcccgccggg 156 ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||| Sbjct: 34182162 ggccgtgtcggaggtggaggtcgacggcgtcgtgttcccgccggtggcccgcccgccggg 34182103 Query: 157 ctccgcccacgcccacttcctcgccggcgcagg 189 ||||| ||||||||||||||||||||||||||| Sbjct: 34182102 ctccggccacgcccacttcctcgccggcgcagg 34182070
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 163 bits (82), Expect = 6e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 350 ggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgacgggcgcgcagtac 409 ||||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 55076 ggcgatttcgagaagttcacgagggtgacgatgatcctgccgctcaccggcgagcagtac 55017 Query: 410 tcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccggcgtgtacacgg 467 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 55016 tcggacaaggtgacggagaactgcgtcgcggcgtggaaggccgccggcgtgtacacgg 54959 Score = 157 bits (79), Expect = 4e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 201 tggagatcggcggccacttcatcaagttcacggccatcggcgtgtacctgcaggccgacg 260 ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 55301 tggagatcgccggcaacttcatcaagttcacggccatcggcgtgtacctggaggagggcg 55242 Query: 261 ccgccgtctccgcgctcgccgccaagtgggccggcaagcccgccgccgatctcgcctccg 320 | ||||| | ||||| ||| ||||||||||||||| |||||| ||| |||||| ||| Sbjct: 55241 cggccgtgccggcgctggccaagaagtgggccggcaagtccgccgacgagctcgccgccg 55182 Query: 321 acgccgccttcttccgcgacgtcgtcaccgg 351 ||||||||||||||||||||||||||||||| Sbjct: 55181 acgccgccttcttccgcgacgtcgtcaccgg 55151 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Minus Query: 97 ggccgtgtcggagctggaggtcgacggcgtcgtcttcccgccgctcgcccgcccgccggg 156 ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||| Sbjct: 55502 ggccgtgtcggaggtggaggtcgacggcgtcgtgttcccgccggtggcccgcccgccggg 55443 Query: 157 ctccgcccacgcccacttcctcgccggcgcagg 189 ||||| ||||||||||||||||||||||||||| Sbjct: 55442 ctccggccacgcccacttcctcgccggcgcagg 55410
>gb|AF474922.1| Oryza sativa chalcone isomerase (Cfi) gene, complete cds Length = 2479 Score = 163 bits (82), Expect = 6e-37 Identities = 109/118 (92%) Strand = Plus / Plus Query: 350 ggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgacgggcgcgcagtac 409 ||||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 1443 ggcgatttcgagaagttcacgagggtgacgatgatcctgccgctcaccggcgagcagtac 1502 Query: 410 tcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccggcgtgtacacgg 467 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 1503 tcggacaaggtgacggagaactgcgtcgcggcgtggaaggccgccggcgtgtacacgg 1560 Score = 157 bits (79), Expect = 4e-35 Identities = 133/151 (88%) Strand = Plus / Plus Query: 201 tggagatcggcggccacttcatcaagttcacggccatcggcgtgtacctgcaggccgacg 260 ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 1219 tggagatcgccggcaacttcatcaagttcacggccatcggcgtgtacctggaggagggcg 1278 Query: 261 ccgccgtctccgcgctcgccgccaagtgggccggcaagcccgccgccgatctcgcctccg 320 | ||||| | ||||| ||| ||||||||||||||| |||||| ||| |||||| ||| Sbjct: 1279 cggccgtgccggcgctggccaagaagtgggccggcaagtccgccgacgagctcgccgccg 1338 Query: 321 acgccgccttcttccgcgacgtcgtcaccgg 351 ||||||||||||||||||||||||||||||| Sbjct: 1339 acgccgccttcttccgcgacgtcgtcaccgg 1369 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 97 ggccgtgtcggagctggaggtcgacggcgtcgtcttcccgccgctcgcccgcccgccggg 156 ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||| Sbjct: 1018 ggccgtgtcggaggtggaggtcgacggcgtcgtgttcccgccggtggcccgcccgccggg 1077 Query: 157 ctccgcccacgcccacttcctcgccggcgcagg 189 ||||| ||||||||||||||||||||||||||| Sbjct: 1078 ctccggccacgcccacttcctcgccggcgcagg 1110
>emb|Z22760.1|ZMCHIGNA Z.mays CHI gene Length = 2278 Score = 147 bits (74), Expect = 4e-32 Identities = 142/164 (86%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 185 gcaggcgtgcgcgggatggagatcggcggccacttcatcaagttcacggccatcggcgtg 244 ||||||||||| || | |||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 1147 gcaggcgtgcgaggcgtcgagatcggaggcaacttcatcaagttcacggccatcggcgtg 1206 Query: 245 tacctgcaggccgacgccgccgtctccgcgctcgccgccaagtgggccggcaagcccgcc 304 |||||| ||| |||| ||||| ||||||| ||| ||||||| ||||||| | ||| Sbjct: 1207 tacctggagg---acgcggccgtgcccgcgctggccaagaagtggggcggcaagacggcc 1263 Query: 305 gccgatctcgcctccgacgccgccttcttccgcgacgtcgtcac 348 | ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1264 gacgagctcgcctccgacgccgccttcttccgcgacgtcgtcac 1307 Score = 139 bits (70), Expect = 9e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 350 ggcgagttcgagaagttcacgagggtgacaatgatcctgccgctgacgggcgcgcagtac 409 ||||| || |||||||||||||||||||| |||||||| ||||||||||||| ||||||| Sbjct: 1405 ggcgactttgagaagttcacgagggtgacgatgatcctcccgctgacgggcgagcagtac 1464 Query: 410 tcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccggcgtgtacacgg 467 |||| || |||||||||||||| || |||| |||||||||||||||| ||||||||| Sbjct: 1465 gcggagaaagtgacggagaactgcgtggcgttctggaaggccgccggcctgtacacgg 1522 Score = 85.7 bits (43), Expect = 1e-13 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 100 cgtgtcggagctggaggtcgacggc-gtcgtcttcccgccgctcgcccgcccgccgggct 158 |||| ||||| ||| |||||||||| ||||||||||||||| | |||||||||||||||| Sbjct: 903 cgtgccggaggtggtggtcgacggccgtcgtcttcccgccggtggcccgcccgccgggct 962 Query: 159 ccgcccacgcccacttcctcgccggcgcagg 189 ||||| | | |||||||||| ||||||||| Sbjct: 963 ccgccggctcgcacttcctcggcggcgcagg 993
>dbj|AB187026.1| Triticum aestivum CHI gene for chalcone isomerase, partial cds Length = 394 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 403 gcagtactcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccggcgtgta 462 |||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||| Sbjct: 1 gcagtactcggacaaggtgacggagaactgcgtcgcctactggaaggccaccggcgtgta 60 Query: 463 cacgg 467 ||||| Sbjct: 61 cacgg 65
>dbj|AB234907.1| Verbena x hybrida mRNA for chalcone isomerase, complete cds, cultivar: Temari Violet Length = 853 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 172 cttcctcgccggcgcaggcgtgcgcgggatggagatcggcggccacttcatcaagttcac 231 |||||||| ||||||||| ||| | || ||||||||| || | |||||||||||||| Sbjct: 124 cttcctcggcggcgcaggggtgagaggcctggagatcgaagggaagttcatcaagttcac 183 Query: 232 ggccatcggcgtgtacctg 250 |||||| || ||||||||| Sbjct: 184 ggccattggtgtgtacctg 202
>emb|Y00852.1|PHCHI Petunia hybrida mRNA for chalcone flavanone isomerase Length = 759 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 380 atgatcctgccgctgacgggcgcgcagtactcggacaaggtgacggagaactgtgtcgcg 439 |||||| |||| |||||||| |||||||||||| |||||| ||||||| ||||| ||| Sbjct: 300 atgatcttgcccttgacgggcaagcagtactcggagaaggtggcggagaattgtgttgcg 359 Query: 440 tactggaagg 449 | ||||||| Sbjct: 360 cattggaagg 369
>emb|X14589.1|PHCHIA Petunia CHI-A gene for chalcone flavanone isomerase Length = 2399 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 380 atgatcctgccgctgacgggcgcgcagtactcggacaaggtgacggagaactgtgtcgcg 439 |||||| |||| |||||||| |||||||||||| |||||| ||||||| ||||| ||| Sbjct: 1719 atgatcttgcccttgacgggcaagcagtactcggagaaggtggcggagaattgtgttgcg 1778 Query: 440 tactggaagg 449 | ||||||| Sbjct: 1779 cattggaagg 1788
>gb|AF233637.1| Petunia x hybrida chalcone isomerase A (chiA) mRNA, complete cds Length = 726 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 393 tgacgggcgcgcagtactcggacaaggtgacggagaactgtgtcgcgtactggaagg 449 |||||||| |||||||||||| |||||| ||||||| ||||| ||| | ||||||| Sbjct: 308 tgacgggcaagcagtactcggagaaggtggcggagaattgtgttgcgcattggaagg 364
>ref|XM_549965.1| Oryza sativa (japonica cultivar-group), mRNA Length = 918 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 259 cgccgccgtctccgcgctcgccgc 282 |||||||||||||||||||||||| Sbjct: 681 cgccgccgtctccgcgctcgccgc 658
>gb|DQ120521.2| Camellia sinensis cultivar UPASI-10 chalcone isomerase mRNA, complete cds Length = 693 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 218 ttcatcaagttcacggccatcggcgtgtacct 249 ||||||||||||||||| ||||| |||||||| Sbjct: 142 ttcatcaagttcacggctatcggagtgtacct 173
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 318 ccgacgccgccttcttccgcgacgtcgtcaccggcg 353 |||| ||||| |||||||||||||||||| |||||| Sbjct: 3019113 ccgaggccgcgttcttccgcgacgtcgtctccggcg 3019148
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 306 ccgatctcgcctccgacgccgccttcttccgc 337 ||||||| ||||||| |||||||||||||||| Sbjct: 7275534 ccgatcttgcctccgccgccgccttcttccgc 7275565 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 5760519 ctagatcgcacccacctacc 5760538
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 259 cgccgccgtctccgcgctcgccgc 282 |||||||||||||||||||||||| Sbjct: 1264036 cgccgccgtctccgcgctcgccgc 1264013 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 aggccgacgccgccgtctccgcgctcgc 279 |||||| ||| ||||||||||||||||| Sbjct: 29182117 aggccggcgctgccgtctccgcgctcgc 29182090 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 28505564 ctagatcgcacccacctacc 28505583
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 318 ccgacgccgccttcttccgcgacgtcgtcaccggcg 353 |||| ||||| |||||||||||||||||| |||||| Sbjct: 5575657 ccgaagccgcgttcttccgcgacgtcgtctccggcg 5575622 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 tcgccgccaagtgggccggcaa 297 |||||||||||||||||||||| Sbjct: 9093291 tcgccgccaagtgggccggcaa 9093312
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 259 cgccgccgtctccgcgctcgccgc 282 |||||||||||||||||||||||| Sbjct: 57690 cgccgccgtctccgcgctcgccgc 57667
>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0062A09 Length = 173541 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 306 ccgatctcgcctccgacgccgccttcttccgc 337 ||||||| ||||||| |||||||||||||||| Sbjct: 9497 ccgatcttgcctccgccgccgccttcttccgc 9528
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 306 ccgatctcgcctccgacgccgccttcttccgc 337 ||||||| ||||||| |||||||||||||||| Sbjct: 127639 ccgatcttgcctccgccgccgccttcttccgc 127670
>dbj|AK103241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123H06, full insert sequence Length = 1603 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 306 ccgatctcgcctccgacgccgccttcttccgc 337 ||||||| ||||||| |||||||||||||||| Sbjct: 163 ccgatcttgcctccgccgccgccttcttccgc 194
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 322 cgccgccttcttccgcgacgtcgtcac 348 ||||||||||||||||||||| ||||| Sbjct: 96883 cgccgccttcttccgcgacgttgtcac 96857
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 322 cgccgccttcttccgcgacgtcgtcac 348 ||||||||||||||||||||| ||||| Sbjct: 29030225 cgccgccttcttccgcgacgttgtcac 29030199 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cgctagatcgcacccacctacc 41 |||||||||||||||||||||| Sbjct: 13512896 cgctagatcgcacccacctacc 13512917
>gb|AC131966.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0028C16, complete sequence Length = 151030 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cgctagatcgcacccacctacc 41 |||||||||||||||||||||| Sbjct: 23265 cgctagatcgcacccacctacc 23286
>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence Length = 166757 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cgctagatcgcacccacctacc 41 |||||||||||||||||||||| Sbjct: 130022 cgctagatcgcacccacctacc 130043
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cgctagatcgcacccacctacc 41 |||||||||||||||||||||| Sbjct: 3160390 cgctagatcgcacccacctacc 3160411 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgccgccgtctccgcgctcgccgc 282 ||||||||| |||||||||||||| Sbjct: 20218207 cgccgccgtgtccgcgctcgccgc 20218230 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 13252619 ctagatcgcacccacctacc 13252638
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 ccgccgccgatctcgcctccga 321 |||||||||||||||||||||| Sbjct: 5497588 ccgccgccgatctcgcctccga 5497609 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 cgccgccgtctccgcgctcgccgcc 283 |||||| |||||||||||||||||| Sbjct: 5696200 cgccgcggtctccgcgctcgccgcc 5696176 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 cgccgtctccgcgctcgccgc 282 ||||||||||||||||||||| Sbjct: 3599311 cgccgtctccgcgctcgccgc 3599291 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 cggagctggaggtcgacggcgtcg 128 |||||||||||||||| ||||||| Sbjct: 8505011 cggagctggaggtcgagggcgtcg 8504988
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 ccggcaagcccgccgccgatctcgcc 316 ||||||||||||||||||| |||||| Sbjct: 42824 ccggcaagcccgccgccgacctcgcc 42799
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cgctagatcgcacccacctacc 41 |||||||||||||||||||||| Sbjct: 3160311 cgctagatcgcacccacctacc 3160332 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgccgccgtctccgcgctcgccgc 282 ||||||||| |||||||||||||| Sbjct: 20229483 cgccgccgtgtccgcgctcgccgc 20229506 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 13259959 ctagatcgcacccacctacc 13259978
>emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018A10, complete sequence Length = 133238 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cgctagatcgcacccacctacc 41 |||||||||||||||||||||| Sbjct: 40690 cgctagatcgcacccacctacc 40711
>gb|AF028238.1|AF028238 Ipomoea purpurea chalcone isomerase (CHI-FL1) mRNA, complete cds Length = 912 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Plus Query: 403 gcagtactcggacaaggtgacggagaactgtgtcgcgtactggaaggccgccgg 456 |||||| ||||| ||||||||||| ||||| || || | |||||| |||||||| Sbjct: 322 gcagtattcggagaaggtgacggaaaactgcgttgctttctggaaagccgccgg 375
>dbj|AB080768.1| Ipomoea batatas chi mRNA for chalcone isomerase, complete cds Length = 770 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 222 tcaagttcacggccatcggcgtgtacctgcaggccgacgccg 263 ||||||||||||| || ||||||||| || | |||||||||| Sbjct: 154 tcaagttcacggcgataggcgtgtacttggaagccgacgccg 195
>gb|AC113509.14| Mus musculus chromosome 1, clone RP23-377L11, complete sequence Length = 193588 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tcgcacccacctacccctgcc 47 ||||||||||||||||||||| Sbjct: 169478 tcgcacccacctacccctgcc 169458
>gb|AC120366.9| Mus musculus chromosome 1, clone RP24-294P1, complete sequence Length = 156784 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 tcgcacccacctacccctgcc 47 ||||||||||||||||||||| Sbjct: 147564 tcgcacccacctacccctgcc 147584
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gccgccgtctccgcgctcgcc 280 ||||||||||||||||||||| Sbjct: 2766120 gccgccgtctccgcgctcgcc 2766100 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cttcccgccgctcgcccgcc 149 |||||||||||||||||||| Sbjct: 3327155 cttcccgccgctcgcccgcc 3327174
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 87877 cgcgggatggagatcggcggc 87857
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 ccggcaagcccgccgccgatc 311 ||||||||||||||||||||| Sbjct: 2659909 ccggcaagcccgccgccgatc 2659889
>gb|AC037441.12| Homo sapiens chromosome , clone RP11-87E22, complete sequence Length = 163147 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 194 cgcgggatggagatcggcggccact 218 ||||||| ||||||||||||||||| Sbjct: 97702 cgcgggaaggagatcggcggccact 97726
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 26722887 cgcgggatggagatcggcggc 26722907
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 6031794 cgcgggatggagatcggcggc 6031774 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 25898223 ctagatcgcacccacctacc 25898204
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 cgccgccttcttccgcgacgtcgtcaccg 350 ||||||||||| ||||||| ||||||||| Sbjct: 7752191 cgccgccttctcccgcgacttcgtcaccg 7752219 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ggccggcaagcccgccgccg 308 |||||||||||||||||||| Sbjct: 22903367 ggccggcaagcccgccgccg 22903348
>gb|DQ005575.1| Streptomyces cinnamonensis methylmalonic semialdehyde dehydrogenase (msdA) gene, complete cds Length = 2328 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gccgacgccgccgtctccgcg 274 ||||||||||||||||||||| Sbjct: 1204 gccgacgccgccgtctccgcg 1224
>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence Length = 87093 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 accggcgagttcgagaagttc 367 ||||||||||||||||||||| Sbjct: 22014 accggcgagttcgagaagttc 21994
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 cgccgccttcttccgcgacgtcgtcaccg 350 ||||||||||| ||||||| ||||||||| Sbjct: 88456 cgccgccttctcccgcgacttcgtcaccg 88484
>emb|BX649364.3| Human DNA sequence from clone RP5-997I15 on chromosome 1, complete sequence Length = 124581 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 136 gccgctcgcccgcccgccgggctccgccc 164 |||||| |||||||||||||| ||||||| Sbjct: 8477 gccgctggcccgcccgccggggtccgccc 8449
>emb|BX640519.2| Human DNA sequence from clone RP11-157L8 on chromosome 1, complete sequence Length = 186829 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 136 gccgctcgcccgcccgccgggctccgccc 164 |||||| |||||||||||||| ||||||| Sbjct: 128863 gccgctggcccgcccgccggggtccgccc 128891
>dbj|AK071588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103B10, full insert sequence Length = 1793 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 64 cgcgggatggagatcggcggc 44
>dbj|AK070818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068B12, full insert sequence Length = 1721 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 41 cgcgggatggagatcggcggc 21
>tpe|BN000065.1|HSA000065 TPA: TPA_inf: Homo sapiens SMP1 gene, RHD gene and RHCE gene Length = 315242 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 136 gccgctcgcccgcccgccgggctccgccc 164 |||||| |||||||||||||| ||||||| Sbjct: 292433 gccgctggcccgcccgccggggtccgccc 292461
>tpe|BN000556.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx27 gene for class III peroxidase 27 precursor, exons 1-3 Length = 1821 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 cgccgccttcttccgcgacgtcgtcaccg 350 ||||||||||| ||||||| ||||||||| Sbjct: 1713 cgccgccttctcccgcgacttcgtcaccg 1741
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 6098271 cgcgggatggagatcggcggc 6098251 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 26216921 ctagatcgcacccacctacc 26216902
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 26651057 cgcgggatggagatcggcggc 26651077
>emb|AL031284.9|HS469D22 Human DNA sequence from clone RP3-469D22 on chromosome 1p35.1-36.13, complete sequence Length = 84811 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 136 gccgctcgcccgcccgccgggctccgccc 164 |||||| |||||||||||||| ||||||| Sbjct: 62002 gccgctggcccgcccgccggggtccgccc 62030
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 48235 cgcgggatggagatcggcggc 48215
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cgcgggatggagatcggcggc 214 ||||||||||||||||||||| Sbjct: 76091 cgcgggatggagatcggcggc 76071
>gb|AF058302.1|AF058302 Streptomyces roseofulvus frenolicin biosynthetic gene cluster, complete sequence Length = 25306 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 cgccgccgtctccgcgctcgccgcc 283 |||||||| |||||||||||||||| Sbjct: 394 cgccgccgcctccgcgctcgccgcc 370
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 cgccgtctccgcgctcgccgc 282 ||||||||||||||||||||| Sbjct: 38494 cgccgtctccgcgctcgccgc 38514
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 gccgacgccgccgtctccgcgctcgccg 281 |||| |||| |||||||||||||||||| Sbjct: 11970 gccgccgcccccgtctccgcgctcgccg 11997
>gb|AC115015.8| Mus musculus chromosome 3, clone RP24-196A21, complete sequence Length = 137911 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 acccctgcccccatcgtctg 58 |||||||||||||||||||| Sbjct: 94827 acccctgcccccatcgtctg 94846
>ref|XM_479975.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2487 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 267 tctccgcgctcgccgccaagtgggccggcaagcccgccgc 306 ||||||| |||||||||||| | ||||||||||||||| Sbjct: 869 tctccgccatcgccgccaagtacgtcggcaagcccgccgc 908
>ref|XM_466485.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ggccggcaagcccgccgccg 308 |||||||||||||||||||| Sbjct: 114 ggccggcaagcccgccgccg 133
>ref|NM_197520.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.23), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgccgccgtctccgcgctcgccgc 282 ||||||||| |||||||||||||| Sbjct: 366 cgccgccgtgtccgcgctcgccgc 389
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 cgcctccgacgccgccttct 332 |||||||||||||||||||| Sbjct: 77790 cgcctccgacgccgccttct 77809
>gb|BC103748.1| Homo sapiens hypothetical protein LOC339983, mRNA (cDNA clone MGC:117272 IMAGE:6195512), complete cds Length = 1545 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgctcgcccgcccgcc 153 |||||||||||||||||||| Sbjct: 581 ccgccgctcgcccgcccgcc 600
>gb|BC093908.1| Homo sapiens hypothetical protein LOC339983, mRNA (cDNA clone MGC:120943 IMAGE:7939753), complete cds Length = 533 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgctcgcccgcccgcc 153 |||||||||||||||||||| Sbjct: 447 ccgccgctcgcccgcccgcc 466
>gb|BC093906.1| Homo sapiens hypothetical protein LOC339983, mRNA (cDNA clone MGC:120941 IMAGE:7939751), complete cds Length = 532 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgctcgcccgcccgcc 153 |||||||||||||||||||| Sbjct: 446 ccgccgctcgcccgcccgcc 465
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cttcccgccgctcgcccgcc 149 |||||||||||||||||||| Sbjct: 483686 cttcccgccgctcgcccgcc 483705
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 86409 ctagatcgcacccacctacc 86428
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 40660 ctagatcgcacccacctacc 40679
>ref|NM_148940.1| Mus musculus RIKEN cDNA 1700036D21 gene (1700036D21Rik), mRNA Length = 1204 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 ccacgcccacttcctcgccggcgcaggc 190 ||||| |||||||||||| ||||||||| Sbjct: 387 ccacggccacttcctcgctggcgcaggc 360
>gb|AC148017.3| Mus musculus BAC clone RP23-56O18 from chromosome 18, complete sequence Length = 152497 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cttcccgccgctcgcccgcccgcc 153 ||||| |||||||||||||||||| Sbjct: 144985 cttccagccgctcgcccgcccgcc 145008
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gccgccttcttccgcgacgt 342 |||||||||||||||||||| Sbjct: 491515 gccgccttcttccgcgacgt 491496
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gtcgtcaccggcgagttcga 360 |||||||||||||||||||| Sbjct: 2076060 gtcgtcaccggcgagttcga 2076079
>gb|AC126057.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026D16, complete sequence Length = 129166 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 126084 ctagatcgcacccacctacc 126065
>ref|XM_990557.1| PREDICTED: Mus musculus hypothetical protein LOC672012 (LOC672012), mRNA Length = 639 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cttcccgccgctcgcccgcccgcc 153 ||||| |||||||||||||||||| Sbjct: 150 cttccagccgctcgcccgcccgcc 173
>gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, complete sequence Length = 188544 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cccgccgctcgcccgcccgccggg 156 |||||||| ||||||||||||||| Sbjct: 171218 cccgccgcccgcccgcccgccggg 171241
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgccaagtgggccggcaagc 299 |||||||||||||||||||| Sbjct: 989298 cgccaagtgggccggcaagc 989279
>gb|AC127342.3| Mus musculus BAC clone RP23-191B18 from chromosome 18, complete sequence Length = 185210 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 cttcccgccgctcgcccgcccgcc 153 ||||| |||||||||||||||||| Sbjct: 140997 cttccagccgctcgcccgcccgcc 140974
>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence Length = 183554 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 163 ccacgcccacttcctcgccggcgcaggc 190 ||||| |||||||||||| ||||||||| Sbjct: 160093 ccacggccacttcctcgctggcgcaggc 160120
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ggccgccggcgtgtacacgg 467 |||||||||||||||||||| Sbjct: 1561 ggccgccggcgtgtacacgg 1542
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 98868 ctagatcgcacccacctacc 98887
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ggccggcaagcccgccgccg 308 |||||||||||||||||||| Sbjct: 3104150 ggccggcaagcccgccgccg 3104131 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 97 ggccgtgtcggagctggaggtcgacggcgtcg 128 |||||||||||| ||||| |||||| |||||| Sbjct: 935056 ggccgtgtcggacctggaagtcgacagcgtcg 935025
>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the 3' end of the OPRL1 gene for opiate receptor-like 1 protein, the GPR8 gene encoding a G protein-coupled receptor, the KIAA0835 gene encoding a protein similar to the myelin transcription factor 1 (MYT1), a novel gene, 7 CpG islands, ESTs, STSs and GSSs, complete sequence Length = 179888 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cccacctacccctgccccca 51 |||||||||||||||||||| Sbjct: 63192 cccacctacccctgccccca 63211
>emb|AL132868.24|HSA262P20 Human DNA sequence from clone RP11-262P20 on chromosome 4, complete sequence Length = 193444 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ccgccgctcgcccgcccgcc 153 |||||||||||||||||||| Sbjct: 7812 ccgccgctcgcccgcccgcc 7793
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0099J16, complete sequence Length = 133198 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 106743 ctagatcgcacccacctacc 106762
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 gtgggccggcaagcccgccgccga 309 ||||||||||||| |||||||||| Sbjct: 27612 gtgggccggcaagaccgccgccga 27635
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cttcccgccgctcgcccgcc 149 |||||||||||||||||||| Sbjct: 3058442 cttcccgccgctcgcccgcc 3058461
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgccgccgtctccgcgctcgccgc 282 |||||| ||||||||||||||||| Sbjct: 139945 cgccgcggtctccgcgctcgccgc 139968
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 cgccgtctccgcgctcgccgccaa 285 |||||||| ||||||||||||||| Sbjct: 47510 cgccgtctacgcgctcgccgccaa 47487
>ref|NM_205530.1| Gallus gallus replication factor C (activator 1) 2, 40kDa (RFC2), mRNA Length = 1310 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cggcgtcgtcttcccgccgc 140 |||||||||||||||||||| Sbjct: 29 cggcgtcgtcttcccgccgc 10
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgccgccgtctccgcgctcgccgc 282 ||||||||| |||||||||||||| Sbjct: 95942 cgccgccgtgtccgcgctcgccgc 95965
>dbj|AK094797.1| Homo sapiens cDNA FLJ37478 fis, clone BRAWH2013219, weakly similar to Homo sapiens N-acetyltransferase Camello 2 (CML2) mRNA Length = 2342 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgctcgcccgcccgcc 153 |||||||||||||||||||| Sbjct: 565 ccgccgctcgcccgcccgcc 584
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ccgcgacgtcgtcaccggcg 353 |||||||||||||||||||| Sbjct: 3425085 ccgcgacgtcgtcaccggcg 3425066
>emb|CR406136.1| Gallus gallus finished cDNA, clone ChEST858g18 Length = 1043 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cggcgtcgtcttcccgccgc 140 |||||||||||||||||||| Sbjct: 207 cggcgtcgtcttcccgccgc 226
>dbj|AK009801.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310044H10 product:HYPOTHETICAL 27.0 KDA PROTEIN homolog [Mus musculus], full insert sequence Length = 1578 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tcaagttcacggccatcggc 241 |||||||||||||||||||| Sbjct: 195 tcaagttcacggccatcggc 176
>dbj|AK006612.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700036D21 product:SERINE PROTEASE-LIKE 1 homolog [Mus musculus], full insert sequence Length = 1826 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 ccacgcccacttcctcgccggcgcaggc 190 ||||| |||||||||||| ||||||||| Sbjct: 420 ccacggccacttcctcgctggcgcaggc 393
>dbj|AB162857.1| Mus musculus TESSP-4 mRNA for testis specific serine protease 4, complete cds Length = 1839 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 ccacgcccacttcctcgccggcgcaggc 190 ||||| |||||||||||| ||||||||| Sbjct: 406 ccacggccacttcctcgctggcgcaggc 379
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 16551408 ctagatcgcacccacctacc 16551427 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 267 tctccgcgctcgccgccaagtgggccggcaagcccgccgc 306 ||||||| |||||||||||| | ||||||||||||||| Sbjct: 2030407 tctccgccatcgccgccaagtacgtcggcaagcccgccgc 2030368
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgcccacttcctcgccggcg 185 |||||||||||||||||||| Sbjct: 30595280 cgcccacttcctcgccggcg 30595299 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 20943901 ctagatcgcacccacctacc 20943920 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtctccgcgctcgccgcc 283 |||||||||||||||||||| Sbjct: 3655487 ccgtctccgcgctcgccgcc 3655506
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 22731210 ctagatcgcacccacctacc 22731229
>gb|AC151729.6| Mus musculus BAC clone RP24-74F2 from chromosome 9, complete sequence Length = 224139 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 aaggtgacggagaactgtgt 435 |||||||||||||||||||| Sbjct: 121242 aaggtgacggagaactgtgt 121261
>gb|AY189899.1| Pseudorabies virus strain Ea UL15 (UL15), UL17 (UL17), UL16 (UL16), and UL14 (UL14) genes, complete cds; and UL13 (UL13) gene, partial cds Length = 6671 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgccgccgtctccgcgctcgccgc 282 ||||||||||||||| |||||||| Sbjct: 4848 cgccgccgtctccgctctcgccgc 4871
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 aggccgacgccgccgtctccgcgctcgc 279 |||||| ||| ||||||||||||||||| Sbjct: 142483 aggccggcgctgccgtctccgcgctcgc 142456
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 32003 ctagatcgcacccacctacc 32022
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 aggccgacgccgccgtctccgcgctcgc 279 |||||| ||| ||||||||||||||||| Sbjct: 27904 aggccggcgctgccgtctccgcgctcgc 27877
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtctccgcgctcgccgcc 283 |||||||||||||||||||| Sbjct: 49715 ccgtctccgcgctcgccgcc 49734
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 274 gctcgccgccaagtgggccggcaagcccgccg 305 ||||||||||| | ||||||||| |||||||| Sbjct: 5547283 gctcgccgccatgcgggccggcaggcccgccg 5547252 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gccaagtgggccggcaagcc 300 |||||||||||||||||||| Sbjct: 2179193 gccaagtgggccggcaagcc 2179212
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 ctcgcctccgacgccgccttcttc 334 ||||||||||||||||||| |||| Sbjct: 1388906 ctcgcctccgacgccgcctccttc 1388929 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 cgacgccgccgtctccgcgctcgc 279 ||||||||||||||||||| |||| Sbjct: 1271852 cgacgccgccgtctccgcggtcgc 1271875
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgcccacttcctcgccggcg 185 |||||||||||||||||||| Sbjct: 93843 cgcccacttcctcgccggcg 93862
>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090E14 Length = 161119 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 70825 ctagatcgcacccacctacc 70844
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 56724 ctagatcgcacccacctacc 56743
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ggccggcaagcccgccgccg 308 |||||||||||||||||||| Sbjct: 23169 ggccggcaagcccgccgccg 23150
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 267 tctccgcgctcgccgccaagtgggccggcaagcccgccgc 306 ||||||| |||||||||||| | ||||||||||||||| Sbjct: 23937 tctccgccatcgccgccaagtacgtcggcaagcccgccgc 23898
>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0006O15 Length = 139723 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ggccggcaagcccgccgccg 308 |||||||||||||||||||| Sbjct: 136705 ggccggcaagcccgccgccg 136686
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 267 tctccgcgctcgccgccaagtgggccggcaagcccgccgc 306 ||||||| |||||||||||| | ||||||||||||||| Sbjct: 155605 tctccgccatcgccgccaagtacgtcggcaagcccgccgc 155566
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E02 Length = 159669 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctagatcgcacccacctacc 41 |||||||||||||||||||| Sbjct: 23232 ctagatcgcacccacctacc 23251
>dbj|AK106036.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D08, full insert sequence Length = 1324 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cgccgccgtctccgcgctcgccgc 282 ||||||||| |||||||||||||| Sbjct: 395 cgccgccgtgtccgcgctcgccgc 418
>dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139B06, full insert sequence Length = 1030 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ggccggcaagcccgccgccg 308 |||||||||||||||||||| Sbjct: 184 ggccggcaagcccgccgccg 203
>gb|AC154616.2| Mus musculus BAC clone RP23-319O9 from 14, complete sequence Length = 179927 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cccacgcccacttcctcgcc 181 |||||||||||||||||||| Sbjct: 122836 cccacgcccacttcctcgcc 122817
>dbj|AK060583.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H06, full insert sequence Length = 1094 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtctccgcgctcgccgcc 283 |||||||||||||||||||| Sbjct: 561 ccgtctccgcgctcgccgcc 580
>gb|AY895973.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 putative cleaveage stimulation factor subunit 1 gene, partial cds Length = 1518 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 gcaggccgacgccgccgtctccgc 273 |||||||| ||||||||||||||| Sbjct: 57 gcaggccgccgccgccgtctccgc 80
>gb|AC137513.3| Mus musculus BAC clone RP24-460O22 from 15, complete sequence Length = 179386 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cccgccgctcgcccgcccgccggg 156 |||||||| ||||||||||||||| Sbjct: 2032 cccgccgcccgcccgcccgccggg 2055
>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence Length = 256632 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 ccacgcccacttcctcgccggcgcaggc 190 ||||| |||||||||||| ||||||||| Sbjct: 130602 ccacggccacttcctcgctggcgcaggc 130575
>emb|Z69638.1|HSL174G8A Human DNA sequence from clone LA04NC01-174G8 on chromosome 4, complete sequence Length = 27974 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ccgccgctcgcccgcccgcc 153 |||||||||||||||||||| Sbjct: 23970 ccgccgctcgcccgcccgcc 23951
>ref|NM_178557.2| Homo sapiens hypothetical protein LOC339983 (FLJ37478), mRNA Length = 2342 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgctcgcccgcccgcc 153 |||||||||||||||||||| Sbjct: 565 ccgccgctcgcccgcccgcc 584
>dbj|AB047758.1| Mus musculus mRNA for serine protease-like 1, complete cds Length = 1204 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 ccacgcccacttcctcgccggcgcaggc 190 ||||| |||||||||||| ||||||||| Sbjct: 387 ccacggccacttcctcgctggcgcaggc 360
>gb|U12438.1|GGU12438 Gallus gallus Leghorn replication factor C/activator 1 subunit mRNA, complete cds Length = 1310 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cggcgtcgtcttcccgccgc 140 |||||||||||||||||||| Sbjct: 29 cggcgtcgtcttcccgccgc 10 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,633,525 Number of Sequences: 3902068 Number of extensions: 2633525 Number of successful extensions: 73447 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68337 Number of HSP's gapped (non-prelim): 5101 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
