ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl22a06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037K06, full insert sequence Length = 2936 Score = 119 bits (60), Expect = 9e-24 Identities = 129/152 (84%) Strand = Plus / Plus Query: 278 gtgagcacggtggccatcgcggtgagcgggagcaggagcagcaggcacgcgctcaggtgg 337 |||||||||||||| || ||||||| ||||||||||| ||||| |||||| |||| |||| Sbjct: 202 gtgagcacggtggcgattgcggtgaacgggagcaggaacagcaagcacgcactcaagtgg 261 Query: 338 gccctcgacaagttcgtgcccggcgggagggtcctcttccggatcctgcatgtccgtccg 397 || |||||||||||||| |||| || | ||||||||||| |||| |||||||||| || Sbjct: 262 gctctcgacaagttcgtccccgaaggaaaggtcctcttccagatcttgcatgtccgcccc 321 Query: 398 cccctcaccatggtgcccacgccaatgggcaa 429 || ||| |||||||| || ||||||||||| Sbjct: 322 accatcaagatggtgccaactccaatgggcaa 353
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 278 gtgagcacggtggccatcgcggtgagcgggagcaggagcagcaggcacgcgctcaggtgg 337 |||||||||||||| || ||||||| ||||||||||| ||||| |||||| |||| |||| Sbjct: 2145021 gtgagcacggtggcgattgcggtgaacgggagcaggaacagcaagcacgcactcaagtgg 2144962 Query: 338 gccctcgacaagttcgtgcccggcgggagggtcctcttccggatcctgcatgtccg 393 || |||||||||||||| |||| || | ||||||||||| |||| |||||||||| Sbjct: 2144961 gctctcgacaagttcgtccccgaaggaaaggtcctcttccagatcttgcatgtccg 2144906 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 28079787 gtctcctcctcctcctcgcc 28079768 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 21470444 tctcctcctcctcctcgccc 21470463 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 4074135 tctcctcctcctcctcgccc 4074116
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 278 gtgagcacggtggccatcgcggtgagcgggagcaggagcagcaggcacgcgctcaggtgg 337 |||||||||||||| || ||||||| ||||||||||| ||||| |||||| |||| |||| Sbjct: 4478 gtgagcacggtggcgattgcggtgaacgggagcaggaacagcaagcacgcactcaagtgg 4419 Query: 338 gccctcgacaagttcgtgcccggcgggagggtcctcttccggatcctgcatgtccg 393 || |||||||||||||| |||| || | ||||||||||| |||| |||||||||| Sbjct: 4418 gctctcgacaagttcgtccccgaaggaaaggtcctcttccagatcttgcatgtccg 4363
>gb|DQ483583.1| Gymnogyps californianus clone 6F microsatellite sequence Length = 355 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcctcctcctcg 115 ||||||||||| |||||||||||||||| Sbjct: 198 gtctcctgctgcctcctcctcctcctcg 171
>gb|DQ483827.1| Gymnogyps californianus clone 250F microsatellite sequence Length = 749 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 88 gtctcctgctgtctcctcctcctcctc 114 ||||||||||| ||||||||||||||| Sbjct: 68 gtctcctgctgcctcctcctcctcctc 94
>gb|DQ483826.1| Gymnogyps californianus clone 249F microsatellite sequence Length = 836 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcctcctcctc 114 |||||||||||||||||| |||||||| Sbjct: 498 gtctcctgctgtctcctcttcctcctc 472 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcctcctcct 113 ||||||||||| |||||||||||||| Sbjct: 199 gtctcctgctgcctcctcctcctcct 174
>gb|DQ483814.1| Gymnogyps californianus clone 237F microsatellite sequence Length = 852 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 88 gtctcctgctgtctcctcctcctcctc 114 ||||||||||| ||||||||||||||| Sbjct: 576 gtctcctgctgcctcctcctcctcctc 602
>gb|DQ483981.1| Gymnogyps californianus clone 147G microsatellite sequence Length = 636 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcctcctcctc 114 ||||||||||| ||||||||||||||| Sbjct: 363 gtctcctgctgcctcctcctcctcctc 337
>gb|AE005732.1| Caulobacter crescentus CB15 section 58 of 359 of the complete genome Length = 14719 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 440 gtctcgcaagtgcgcgacgacgt 462 ||||||||||||||||||||||| Sbjct: 14350 gtctcgcaagtgcgcgacgacgt 14328
>emb|AL772311.19| Mouse DNA sequence from clone RP23-87P16 on chromosome 4, complete sequence Length = 234393 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcctcctcctc 114 ||||||| ||||||||||||||||||| Sbjct: 106075 gtctcctcctgtctcctcctcctcctc 106049
>gb|DQ214609.1| Taeniopygia guttata clone 0064P0001G10 neuronal olfactomedin-related ER localized protein variant 3-like mRNA, complete sequence Length = 1228 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccggt 121 |||||||||||||||||||||| Sbjct: 179 ctcctcctcctcctcgcccggt 158
>ref|NM_189504.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3084 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 2045 ctgctgtctcctcctcctcctc 2024
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgcccgg 120 |||||||||||||||||||||| Sbjct: 704992 tctcctcctcctcctcgcccgg 705013
>gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C5, complete sequence Length = 126762 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgcccgg 120 |||||||||||||||||||||| Sbjct: 13940 tctcctcctcctcctcgcccgg 13961
>gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, complete sequence Length = 206840 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 191882 ctgctgtctcctcctcctcctc 191903
>gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete sequence Length = 163517 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 gagcgggagcaggagcagcagg 322 |||||||||||||||||||||| Sbjct: 143210 gagcgggagcaggagcagcagg 143189
>gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete sequence Length = 193320 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagcagg 322 |||||||||||||||||||||| Sbjct: 142749 gagcgggagcaggagcagcagg 142770
>gb|BT015239.1| Drosophila melanogaster RE02133 full insert cDNA Length = 4742 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagcagg 322 |||||||||||||||||||||| Sbjct: 2243 gagcgggagcaggagcagcagg 2264
>gb|DQ483494.1| Gymnogyps californianus clone 53D microsatellite sequence Length = 854 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcctcctcct 113 ||||||||||| |||||||||||||| Sbjct: 280 gtctcctgctgcctcctcctcctcct 255
>ref|XM_820511.1| Trypanosoma brucei TREU927 clone RPCI93-27C5 hypothetical protein (Tb927.3.2750) partial mRNA Length = 2616 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 tctcctcctcctcctcgcccgg 120 |||||||||||||||||||||| Sbjct: 928 tctcctcctcctcctcgcccgg 907
>gb|AC125404.4| Mus musculus BAC clone RP23-10A1 from 12, complete sequence Length = 209092 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 194341 ctgctgtctcctcctcctcctc 194362
>gb|AC073562.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-201H14, complete sequence Length = 235252 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 60864 ctgctgtctcctcctcctcctc 60843
>gb|AC091694.9| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-316F3, Complete Sequence, complete sequence Length = 213119 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 89 tctcctgctgtctcctcctcctcctc 114 |||||||||| ||||||||||||||| Sbjct: 145626 tctcctgctgcctcctcctcctcctc 145601
>ref|NM_001038883.1| Drosophila melanogaster CG33988-RA (CG33988), mRNA Length = 4726 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagcagg 322 |||||||||||||||||||||| Sbjct: 2243 gagcgggagcaggagcagcagg 2264
>gb|BT022875.1| Drosophila melanogaster IP12847 full insert cDNA Length = 3197 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagcagg 322 |||||||||||||||||||||| Sbjct: 707 gagcgggagcaggagcagcagg 728
>gb|BT022839.1| Drosophila melanogaster IP12947 full insert cDNA Length = 3197 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagcagg 322 |||||||||||||||||||||| Sbjct: 707 gagcgggagcaggagcagcagg 728
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 43149192 ctgctgtctcctcctcctcctc 43149171 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctcg 115 ||||||||||||||||||||| Sbjct: 34139822 gctgtctcctcctcctcctcg 34139802 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 296 gcggtgagcgggagcaggagcagcaggc 323 |||| |||| |||||||||||||||||| Sbjct: 42475476 gcggcgagcaggagcaggagcagcaggc 42475449
>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone BACR03B07, complete sequence Length = 170089 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 gagcgggagcaggagcagcagg 322 |||||||||||||||||||||| Sbjct: 65261 gagcgggagcaggagcagcagg 65240
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 36647 ctgctgtctcctcctcctcctc 36626
>dbj|AK100555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103M06, full insert sequence Length = 3218 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 1968 ctgctgtctcctcctcctcctc 1947
>gb|AC122547.11| Mus musculus chromosome 1, clone RP23-76P20, complete sequence Length = 232651 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 206298 ctgctgtctcctcctcctcctc 206277
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 gagcgggagcaggagcagcagg 322 |||||||||||||||||||||| Sbjct: 27414 gagcgggagcaggagcagcagg 27393
>gb|AC064793.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-369O21, complete sequence Length = 196933 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 86183 ctgctgtctcctcctcctcctc 86162
>gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complete sequence Length = 178801 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 63240 ctgctgtctcctcctcctcctc 63219
>gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosome 12, complete sequence Length = 217434 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ctgctgtctcctcctcctcctc 114 |||||||||||||||||||||| Sbjct: 51736 ctgctgtctcctcctcctcctc 51757
>emb|AL645542.13| Mouse DNA sequence from clone RP23-468A19 on chromosome 11, complete sequence Length = 166100 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 89 tctcctgctgtctcctcctcctcctc 114 |||||||||| ||||||||||||||| Sbjct: 84126 tctcctgctgcctcctcctcctcctc 84151
>ref|NM_001031401.1| Gallus gallus hematopoietic cell-specific Lyn substrate 1 (HCLS1), mRNA Length = 2586 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 1143 tgctgtctcctcctcctcctc 1123
>ref|NM_190982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctcg 115 ||||||||||||||||||||| Sbjct: 356 gctgtctcctcctcctcctcg 336
>ref|NM_194322.1| Homo sapiens otoferlin (OTOF), transcript variant 3, mRNA Length = 5124 Score = 42.1 bits (21), Expect = 1.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctcgcccggttcctc 126 ||||||||| || |||||||||||||||| ||||||| Sbjct: 3993 ctcctgctg-ctgctcctcctcctcgccctgttcctc 4028
>ref|NM_004802.2| Homo sapiens otoferlin (OTOF), transcript variant 2, mRNA Length = 4970 Score = 42.1 bits (21), Expect = 1.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctcgcccggttcctc 126 ||||||||| || |||||||||||||||| ||||||| Sbjct: 3839 ctcctgctg-ctgctcctcctcctcgccctgttcctc 3874
>ref|NM_194248.1| Homo sapiens otoferlin (OTOF), transcript variant 1, mRNA Length = 7172 Score = 42.1 bits (21), Expect = 1.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctcgcccggttcctc 126 ||||||||| || |||||||||||||||| ||||||| Sbjct: 6041 ctcctgctg-ctgctcctcctcctcgccctgttcctc 6076
>gb|AC164437.2| Mus musculus BAC clone RP23-105B9 from chromosome 14, complete sequence Length = 205044 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 ctcctgctgtctcctcctcctcctc 114 ||||| ||||||||||||||||||| Sbjct: 40483 ctccttctgtctcctcctcctcctc 40459
>gb|BC060618.1| Mus musculus RAB6B, member RAS oncogene family, mRNA (cDNA clone MGC:77988 IMAGE:6406134), complete cds Length = 4768 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctcctcgcccgg 120 ||||||||||||||||||||| Sbjct: 46 ctcctcctcctcctcgcccgg 66
>gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosome 9, complete sequence Length = 194871 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 ctgctgtctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 155012 ctgctgtctcctcctcctcct 155032
>gb|AC156634.2| Mus musculus BAC clone RP24-462L6 from chromosome 9, complete sequence Length = 112412 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 25377 tgctgtctcctcctcctcctc 25397
>gb|AC104868.8| Mus musculus chromosome 1, clone RP24-532K6, complete sequence Length = 182376 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 56443 tgctgtctcctcctcctcctc 56463
>ref|XM_993424.1| PREDICTED: Mus musculus triadin, transcript variant 1 (Trdn), mRNA Length = 1222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 ctcctgctgtctcctcctcct 110 ||||||||||||||||||||| Sbjct: 1062 ctcctgctgtctcctcctcct 1042
>ref|XM_919985.2| PREDICTED: Mus musculus triadin, transcript variant 6 (Trdn), mRNA Length = 1222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 ctcctgctgtctcctcctcct 110 ||||||||||||||||||||| Sbjct: 1062 ctcctgctgtctcctcctcct 1042
>ref|XM_898960.2| PREDICTED: Mus musculus triadin, transcript variant 3 (Trdn), mRNA Length = 1222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 ctcctgctgtctcctcctcct 110 ||||||||||||||||||||| Sbjct: 1062 ctcctgctgtctcctcctcct 1042
>emb|CR702150.2|CNS0G4QA Tetraodon nigroviridis full-length cDNA Length = 1091 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tctcctgctgtctcctcctcc 109 ||||||||||||||||||||| Sbjct: 23 tctcctgctgtctcctcctcc 3
>emb|CR701623.2|CNS0G4BN Tetraodon nigroviridis full-length cDNA Length = 1109 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tctcctgctgtctcctcctcc 109 ||||||||||||||||||||| Sbjct: 38 tctcctgctgtctcctcctcc 18
>emb|AL355144.16| Human DNA sequence from clone RP5-1027O11 on chromosome 1p22.1-22.3 Contains a novel gene, complete sequence Length = 135311 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 tctttgattaggagggagggcggga 194 |||||||||||||||||||| |||| Sbjct: 107835 tctttgattaggagggagggaggga 107811
>emb|AL162400.11| Human DNA sequence from clone RP11-5P4 on chromosome 1p31.3-32.3 Contains three novel genes, complete sequence Length = 117840 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 3782 tgctgtctcctcctcctcctc 3802
>gb|AC120768.5| Rattus norvegicus 7 BAC CH230-152B10 (Children's Hospital Oakland Research Institute) complete sequence Length = 221436 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 199834 tgctgtctcctcctcctcctc 199814
>gb|AC164299.2| Mus musculus BAC clone RP23-313K8 from chromosome 1, complete sequence Length = 160562 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 |||||||| |||||||||||||||| Sbjct: 111057 ctcctgctttctcctcctcctcctc 111081 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 |||||||| |||||||||||||||| Sbjct: 111002 ctcctgctttctcctcctcctcctc 111026 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 |||||||| |||||||||||||||| Sbjct: 110783 ctcctgctttctcctcctcctcctc 110807
>gb|AC163199.8| Mus musculus 6 BAC RP23-333F8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233589 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 217984 tgctgtctcctcctcctcctc 217964
>emb|AJ719284.1| Gallus gallus mRNA for hypothetical protein, clone 1b22 Length = 2586 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 1143 tgctgtctcctcctcctcctc 1123
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 cgggagcaggagcagcaggca 324 ||||||||||||||||||||| Sbjct: 27124 cgggagcaggagcagcaggca 27144
>gb|AC091203.3| Drosophila melanogaster 3L BAC RP98-48N8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176929 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 cgggagcaggagcagcaggca 324 ||||||||||||||||||||| Sbjct: 138356 cgggagcaggagcagcaggca 138376
>gb|AC102953.5| Homo sapiens BAC clone RP11-1246C19 from 7, complete sequence Length = 148996 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 gtctcctcctcctcctcgccc 118 ||||||||||||||||||||| Sbjct: 72756 gtctcctcctcctcctcgccc 72776
>gb|AF223415.1|AF223415 Mus musculus cardiac triadin isoform 1 mRNA, complete cds Length = 1179 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 ctcctgctgtctcctcctcct 110 ||||||||||||||||||||| Sbjct: 1003 ctcctgctgtctcctcctcct 983
>gb|AC156633.2| Mus musculus BAC clone RP24-421P3 from chromosome 9, complete sequence Length = 175422 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctcctcgcccgg 120 ||||||||||||||||||||| Sbjct: 48187 ctcctcctcctcctcgcccgg 48207
>dbj|AK035893.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630015C03 product:RAS-RELATED PROTEIN RAB-6B homolog [Homo sapiens], full insert sequence Length = 2563 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctcctcgcccgg 120 ||||||||||||||||||||| Sbjct: 5 ctcctcctcctcctcgcccgg 25
>dbj|AK082732.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230098J04 product:RAS-RELATED PROTEIN RAB-6B homolog [Homo sapiens], full insert sequence Length = 4858 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctcctcgcccgg 120 ||||||||||||||||||||| Sbjct: 169 ctcctcctcctcctcgcccgg 189
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 gagcgggagcaggagcagcag 321 ||||||||||||||||||||| Sbjct: 15902238 gagcgggagcaggagcagcag 15902218
>gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, complete sequence Length = 63849 Score = 42.1 bits (21), Expect = 1.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 90 ctcctgctgtctcctcctcctcctcgcccggttcctc 126 ||||||||| || |||||||||||||||| ||||||| Sbjct: 43664 ctcctgctg-ctgctcctcctcctcgccctgttcctc 43629
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctcg 115 ||||||||||||||||||||| Sbjct: 136300 gctgtctcctcctcctcctcg 136280
>gb|AF183186.1|AF183186 Homo sapiens brain otoferlin short isoform (OTOF) mRNA, complete cds Length = 5124 Score = 42.1 bits (21), Expect = 1.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctcgcccggttcctc 126 ||||||||| || |||||||||||||||| ||||||| Sbjct: 3993 ctcctgctg-ctgctcctcctcctcgccctgttcctc 4028
>gb|AF183185.1|AF183185 Homo sapiens brain otoferlin long isoform (OTOF) mRNA, complete cds Length = 7172 Score = 42.1 bits (21), Expect = 1.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctcgcccggttcctc 126 ||||||||| || |||||||||||||||| ||||||| Sbjct: 6041 ctcctgctg-ctgctcctcctcctcgccctgttcctc 6076
>ref|XM_343459.2| PREDICTED: Rattus norvegicus RAB6B, member RAS oncogene family (predicted) (Rab6b_predicted), mRNA Length = 4609 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctcctcgcccgg 120 ||||||||||||||||||||| Sbjct: 1562 ctcctcctcctcctcgcccgg 1582
>gb|AC093731.2| Homo sapiens BAC clone RP11-12L16 from 2, complete sequence Length = 190686 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 62745 tgctgtctcctcctcctcctc 62725
>gb|AC098932.3| Homo sapiens chromosome 1 clone RP11-480D2, complete sequence Length = 186291 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 tctttgattaggagggagggcggga 194 |||||||||||||||||||| |||| Sbjct: 42157 tctttgattaggagggagggaggga 42133
>emb|AL928771.6| Mouse DNA sequence from clone RP23-45J15 on chromosome 4, complete sequence Length = 133159 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 110516 tgctgtctcctcctcctcctc 110536
>gb|AC157017.3| Mus musculus 10 BAC RP24-559D16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 170093 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 ctcctgctgtctcctcctcct 110 ||||||||||||||||||||| Sbjct: 99641 ctcctgctgtctcctcctcct 99621
>gb|AC153966.4| Mus musculus 10 BAC RP24-357P6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 155839 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 ctcctgctgtctcctcctcct 110 ||||||||||||||||||||| Sbjct: 25525 ctcctgctgtctcctcctcct 25505
>gb|AF107403.1|AF107403 Homo sapiens otoferlin (OTOF) mRNA, complete cds Length = 4970 Score = 42.1 bits (21), Expect = 1.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctcgcccggttcctc 126 ||||||||| || |||||||||||||||| ||||||| Sbjct: 3839 ctcctgctg-ctgctcctcctcctcgccctgttcctc 3874
>gb|AE003552.4| Drosophila melanogaster chromosome 3L, section 33 of 83 of the complete sequence Length = 286770 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 cgggagcaggagcagcaggca 324 ||||||||||||||||||||| Sbjct: 137721 cgggagcaggagcagcaggca 137741
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 gagcgggagcaggagcagcag 321 ||||||||||||||||||||| Sbjct: 15855471 gagcgggagcaggagcagcag 15855451
>gb|AC159900.3| Mus musculus BAC clone RP23-48H10 from chromosome 9, complete sequence Length = 194510 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 184608 tgctgtctcctcctcctcctc 184588
>emb|AL731754.3|CNS08C83 Oryza sativa chromosome 12, . BAC OJ1016_H08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113212 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagcag 321 ||||||||||||||||||||| Sbjct: 35196 gagcgggagcaggagcagcag 35216
>gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complete sequence Length = 153629 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 ctgctgtctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 54899 ctgctgtctcctcctcctcct 54919
>emb|AL928652.10| Mouse DNA sequence from clone RP23-300G1 on chromosome 4, complete sequence Length = 37820 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 ||||||||| ||||||||||||||| Sbjct: 23318 ctcctgctgcctcctcctcctcctc 23342
>emb|CT025575.12| Mouse DNA sequence from clone RP23-272A7 on chromosome 9, complete sequence Length = 232192 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tgctgtctcctcctcctcctc 114 ||||||||||||||||||||| Sbjct: 225632 tgctgtctcctcctcctcctc 225652
>ref|NM_173781.3| Mus musculus RAB6B, member RAS oncogene family (Rab6b), mRNA Length = 4768 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctcctcgcccgg 120 ||||||||||||||||||||| Sbjct: 46 ctcctcctcctcctcgcccgg 66
>gb|AC167974.3| Mus musculus BAC clone RP23-314B11 from chromosome 1, complete sequence Length = 210757 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 |||||||| |||||||||||||||| Sbjct: 90956 ctcctgctttctcctcctcctcctc 90980 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 |||||||| |||||||||||||||| Sbjct: 90901 ctcctgctttctcctcctcctcctc 90925 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 |||||||| |||||||||||||||| Sbjct: 90707 ctcctgctttctcctcctcctcctc 90731 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 |||||||| |||||||||||||||| Sbjct: 90682 ctcctgctttctcctcctcctcctc 90706 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 ctcctgctgtctcctcctcctcctc 114 |||||||| |||||||||||||||| Sbjct: 90645 ctcctgctttctcctcctcctcctc 90669
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ggagcaggagcagcaggcac 325 |||||||||||||||||||| Sbjct: 64300 ggagcaggagcagcaggcac 64281
>ref|NM_120001.2| Arabidopsis thaliana unknown protein AT4G38390 mRNA, complete cds Length = 1922 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 cgtctcctgctgtctcctcctcctcctc 114 ||||||| |||||||||||||| ||||| Sbjct: 401 cgtctccggctgtctcctcctcatcctc 428
>gb|AY374478.1| Tetraodon nigroviridis class I helical cytokine receptor number 6 (CRFA6) mRNA, complete cds Length = 2060 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 21 gctgtctcctcctcctcctc 40
>gb|AC163358.3| Mus musculus BAC clone RP23-11M14 from chromosome 14, complete sequence Length = 208634 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 11299 gctgtctcctcctcctcctc 11280
>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence Length = 172362 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 agcgggagcaggagcagcag 321 |||||||||||||||||||| Sbjct: 85374 agcgggagcaggagcagcag 85355
>ref|NM_194931.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0004E08.12), mRNA Length = 3468 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 ctccggcgagacggcgccggagatggag 277 |||||||| |||||||||||||| |||| Sbjct: 633 ctccggcgggacggcgccggagagggag 606
>ref|XM_467429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3201 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 167 gtctcctcctcctcctcgcc 186
>ref|XM_465648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 806 ctcctcctcctcctcgcccg 787
>gb|BT016046.1| Drosophila melanogaster LP20007 full insert cDNA Length = 4119 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ggagcaggagcagcaggcac 325 |||||||||||||||||||| Sbjct: 1037 ggagcaggagcagcaggcac 1056
>gb|AC158957.2| Mus musculus chromosome 15, clone RP23-27P5, complete sequence Length = 187390 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 112337 gctgtctcctcctcctcctc 112356
>gb|AC163449.2| Mus musculus chromosome 3, clone RP23-193H21, complete sequence Length = 199224 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 165428 gctgtctcctcctcctcctc 165409
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 463802 tctcctcctcctcctcgccc 463821
>gb|AC102327.8| Mus musculus chromosome 15, clone RP24-502J3, complete sequence Length = 188266 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 159492 gctgtctcctcctcctcctc 159473
>gb|AY023092.1| Oryza sativa microsatellite MRG5417 containing (GAG)X8, closest to marker S10251, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 129 gctgtctcctcctcctcctc 110
>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0087P19, complete sequence Length = 172066 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 actctctttgattaggagggaggg 189 ||||| |||||||||||||||||| Sbjct: 46435 actctgtttgattaggagggaggg 46412
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 ctccggcgagacggcgccggagatggag 277 |||||||| |||||||||||||| |||| Sbjct: 71335 ctccggcgggacggcgccggagagggag 71308
>ref|XM_590474.2| PREDICTED: Bos taurus similar to Probable G-protein coupled receptor GPR4 (GPR19) (LOC512876), mRNA Length = 1657 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gagggagggcgggaagaggt 200 |||||||||||||||||||| Sbjct: 512 gagggagggcgggaagaggt 493
>ref|XM_959881.1| Neurospora crassa OR74A hypothetical protein (NCU03115.1) partial mRNA Length = 2667 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 tcctgctgtctcctcctcctcctcgccc 118 |||||||| |||||||||||||| |||| Sbjct: 2152 tcctgctgcctcctcctcctcctagccc 2125
>ref|XM_330550.1| Neurospora crassa OR74A hypothetical protein (NCU03115.1) partial mRNA Length = 2667 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 tcctgctgtctcctcctcctcctcgccc 118 |||||||| |||||||||||||| |||| Sbjct: 2152 tcctgctgcctcctcctcctcctagccc 2125
>ref|XM_875802.1| PREDICTED: Bos taurus similar to CG31690-PB, isoform B, transcript variant 2 (LOC536384), mRNA Length = 3696 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 423 ctcctcctcctcctcgcccg 404
>gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosome 14, complete sequence Length = 200350 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 195297 gctgtctcctcctcctcctc 195278
>gb|BC116089.1| Bos taurus cDNA clone MGC:138964 IMAGE:8093512, complete cds Length = 1767 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gagggagggcgggaagaggt 200 |||||||||||||||||||| Sbjct: 596 gagggagggcgggaagaggt 577
>gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome 19, complete sequence Length = 278583 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 61439 gctgtctcctcctcctcctc 61458
>gb|AC147045.2| Mus musculus BAC clone RP23-100E5 from chromosome 16, complete sequence Length = 191975 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 cgtctcctgctgtctcctcctcctcctc 114 ||||||| ||||||||||||||||||| Sbjct: 189669 cgtctccgtctgtctcctcctcctcctc 189642
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 390254 gctgtctcctcctcctcctc 390273
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cggcgccggagatggaggtg 280 |||||||||||||||||||| Sbjct: 9347691 cggcgccggagatggaggtg 9347710 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 8079162 gctgtctcctcctcctcctc 8079181
>gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome 7, complete sequence Length = 223362 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cctgctgtctcctcctcctc 111 |||||||||||||||||||| Sbjct: 120229 cctgctgtctcctcctcctc 120210
>gb|AC124688.3| Mus musculus BAC clone RP24-484D9 from chromosome 14, complete sequence Length = 141678 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 16812 gctgtctcctcctcctcctc 16793
>gb|DQ483987.1| Gymnogyps californianus clone 153G microsatellite sequence Length = 723 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcctcctc 111 ||||||||||| |||||||||||| Sbjct: 288 gtctcctgctgcctcctcctcctc 265
>ref|XM_753382.1| Ustilago maydis 521 hypothetical protein (UM02328.1) partial mRNA Length = 5370 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 agcgggagcaggagcagcag 321 |||||||||||||||||||| Sbjct: 4401 agcgggagcaggagcagcag 4382
>ref|XM_754162.1| Ustilago maydis 521 hypothetical protein (UM03108.1) partial mRNA Length = 3963 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 424 gtctcctcctcctcctcgcc 443
>gb|AC124364.4| Mus musculus BAC clone RP24-538E16 from chromosome 12, complete sequence Length = 177697 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 87196 gctgtctcctcctcctcctc 87215
>gb|AC131726.3| Mus musculus BAC clone RP23-132P9 from 3, complete sequence Length = 190554 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 121864 gctgtctcctcctcctcctc 121883
>gb|AC125191.4| Mus musculus BAC clone RP23-262C22 from 16, complete sequence Length = 196580 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 cgtctcctgctgtctcctcctcctcctc 114 ||||||| ||||||||||||||||||| Sbjct: 116645 cgtctccgtctgtctcctcctcctcctc 116672
>emb|CR956632.4| Pig DNA sequence from clone CH242-197B5 on chromosome 7, complete sequence Length = 186089 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 146162 gctgtctcctcctcctcctc 146143
>gb|AY387091.1| Rattus norvegicus LRRGT00105 mRNA, complete cds Length = 936 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgcccggttcctc 126 |||||||||||||||| |||| |||||| Sbjct: 830 tctcctcctcctcctcccccgcttcctc 857
>gb|AC102409.10| Mus musculus chromosome 18, clone RP24-365B20, complete sequence Length = 137137 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 67881 ctcctcctcctcctcgcccg 67862
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcctgctgtctcctcctcct 110 |||||||||||||||||||| Sbjct: 55729 tcctgctgtctcctcctcct 55748
>gb|DQ334138.1| Drosophila miranda CG2841 gene, partial cds Length = 1005 Score = 40.1 bits (20), Expect = 6.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcctcctcctcg 115 ||||||||||| |||||||||||||||| Sbjct: 65 gtctcctgctg-ctcctcctcctcctcg 39
>gb|AC132050.4| Rattus norvegicus 20 BAC CH230-118G13 (Children's Hospital Oakland Research Institute) complete sequence Length = 247624 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 239235 ctcctcctcctcctcgcccg 239216
>emb|AL450325.5| Human DNA sequence from clone RP11-17F15 on chromosome 6 Contains the 5' end of the TReP-132 gene for zinc finger transcription protein, complete sequence Length = 88119 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 69687 gctgtctcctcctcctcctc 69706
>ref|XM_792583.1| PREDICTED: Strongylocentrotus purpuratus similar to Myosin-9B (Myosin IXb) (Unconventional myosin-9b) (LOC593092), partial mRNA Length = 4424 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 cctgctgtctcctcctcctcctcg 115 |||||||| ||||||||||||||| Sbjct: 2663 cctgctgtatcctcctcctcctcg 2640
>emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C13 on chromosome 6q25.2-26 Contains the 5' end of a novel gene, a hypothetical protein PNAS-131 pseudogene and a CpG island, complete sequence Length = 150336 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 13190 ctcctcctcctcctcgcccg 13171
>gb|AC092896.9| Homo sapiens 3 BAC RP11-274J15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170330 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tctcctgctgtctcctcctc 108 |||||||||||||||||||| Sbjct: 38759 tctcctgctgtctcctcctc 38740
>gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, complete sequence Length = 200979 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gggagcaggagcagcaggca 324 |||||||||||||||||||| Sbjct: 156940 gggagcaggagcagcaggca 156921
>gb|BC100374.1| Mus musculus cDNA clone IMAGE:30848651 Length = 2065 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 602 gctgtctcctcctcctcctc 583
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 cgtctcctgctgtctcctcctcctcctc 114 ||||||| |||||||||||||| ||||| Sbjct: 85117 cgtctccggctgtctcctcctcatcctc 85144
>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone F22I13 (ESSA project) Length = 93760 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 cgtctcctgctgtctcctcctcctcctc 114 ||||||| |||||||||||||| ||||| Sbjct: 44160 cgtctccggctgtctcctcctcatcctc 44187
>gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, complete sequence Length = 170969 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggagcaggagcagcaggca 324 |||||||||||||||||||| Sbjct: 170842 gggagcaggagcagcaggca 170861
>gb|AC008735.9| Homo sapiens chromosome 19 clone CTD-2537I9, complete sequence Length = 223879 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctgtctcctcctcctcctcg 115 |||||||||||||||||||| Sbjct: 73463 ctgtctcctcctcctcctcg 73482
>gb|AC023716.4| Drosophila melanogaster X BAC RP98-45E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169124 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagca 320 |||||||||||||||||||| Sbjct: 36091 gagcgggagcaggagcagca 36110
>gb|AC023694.4| Drosophila melanogaster X BAC RP98-18B11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170301 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagca 320 |||||||||||||||||||| Sbjct: 78266 gagcgggagcaggagcagca 78285
>ref|NM_132384.2| Drosophila melanogaster CG2962-RA (CG2962), mRNA Length = 1351 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gagcgggagcaggagcagca 320 |||||||||||||||||||| Sbjct: 895 gagcgggagcaggagcagca 876
>gb|AC090186.7| Homo sapiens chromosome 8, clone RP11-11C20, complete sequence Length = 143753 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtctcctgctgtctcctcct 107 |||||||||||||||||||| Sbjct: 74853 gtctcctgctgtctcctcct 74834
>ref|NM_078575.2| Drosophila melanogaster dusky CG9355-RA (dy), mRNA Length = 3963 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ggagcaggagcagcaggcac 325 |||||||||||||||||||| Sbjct: 958 ggagcaggagcagcaggcac 977
>gb|AE009902.1|AE009902 Pyrobaculum aerophilum strain IM2 section 157 of 201 of the complete genome Length = 9227 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcctcctcctcctcgcccgg 120 |||||||||||||||||||| Sbjct: 4262 tcctcctcctcctcgcccgg 4243
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cggcgccggagatggaggtg 280 |||||||||||||||||||| Sbjct: 45091 cggcgccggagatggaggtg 45110
>gb|AY070547.1| Drosophila melanogaster LD27487 full length cDNA Length = 1145 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gagcgggagcaggagcagca 320 |||||||||||||||||||| Sbjct: 895 gagcgggagcaggagcagca 876
>gb|AC068533.7| Homo sapiens PAC clone RP5-1132H15 from 7, complete sequence Length = 140974 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 58532 gctgtctcctcctcctcctc 58551
>ref|XM_682482.1| PREDICTED: Danio rerio similar to discs, large homolog-associated protein 4 (LOC559166), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 80 gctgtctcctcctcctcctc 61
>ref|NM_001024777.1| Rattus norvegicus similar to hypothetical protein MGC50721 (LOC308954), mRNA Length = 2136 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgcccggttcctc 126 |||||||||||||||| |||| |||||| Sbjct: 727 tctcctcctcctcctcccccgcttcctc 754
>gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, complete sequence Length = 186083 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 113353 tctcctcctcctcctcgccc 113334
>gb|BC097426.1| Rattus norvegicus similar to hypothetical protein MGC50721, mRNA (cDNA clone MGC:114473 IMAGE:7455141), complete cds Length = 2136 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgcccggttcctc 126 |||||||||||||||| |||| |||||| Sbjct: 727 tctcctcctcctcctcccccgcttcctc 754
>gb|AC102298.14| Mus musculus chromosome 7, clone RP24-396N13, complete sequence Length = 187811 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cctgctgtctcctcctcctc 111 |||||||||||||||||||| Sbjct: 151971 cctgctgtctcctcctcctc 151990
>gb|AC155833.10| Mus musculus 10 BAC RP24-405O10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176338 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 149865 tctcctcctcctcctcgccc 149884
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cgagacggcgccggagatggaggt 279 ||||||| |||||||||||||||| Sbjct: 19654168 cgagacgccgccggagatggaggt 19654145
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 actctctttgattaggagggaggg 189 ||||| |||||||||||||||||| Sbjct: 10150271 actctgtttgattaggagggaggg 10150248
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 ctccggcgagacggcgccggagatggag 277 |||||||| |||||||||||||| |||| Sbjct: 3480206 ctccggcgggacggcgccggagagggag 3480179
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctgtctcctcctcctcctcg 115 |||||||||||||||||||| Sbjct: 7918145 ctgtctcctcctcctcctcg 7918164
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cggcgccggagatggaggtg 280 |||||||||||||||||||| Sbjct: 9345812 cggcgccggagatggaggtg 9345831 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 8076997 gctgtctcctcctcctcctc 8077016
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 29470597 gtctcctcctcctcctcgcc 29470616 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 16576310 ctcctcctcctcctcgcccg 16576291 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctgtctcctcctcctcctcg 115 |||||||||||||||||||| Sbjct: 3102171 ctgtctcctcctcctcctcg 3102190
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 10592 gctgtctcctcctcctcctc 10611
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 296 gcggtgagcgggagcaggagcagcaggc 323 |||| |||| |||||||||||||||||| Sbjct: 134814 gcggcgagcaggagcaggagcagcaggc 134787
>gb|AC019048.7| Homo sapiens BAC clone RP11-90J22 from 2, complete sequence Length = 119481 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcctgctgtctcctcctcctcctc 114 |||| ||||||||||||||||||| Sbjct: 28384 tcctcctgtctcctcctcctcctc 28407
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome IV, complete sequence Length = 107740 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 cgtctcctgctgtctcctcctcctcctc 114 ||||||| |||||||||||||| ||||| Sbjct: 80408 cgtctccggctgtctcctcctcatcctc 80381
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 cggcgccggagatggaggtg 280 |||||||||||||||||||| Sbjct: 8274 cggcgccggagatggaggtg 8255
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 543435 ctcctcctcctcctcgcccg 543454
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 124606 gtctcctcctcctcctcgcc 124587
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 65627 gtctcctcctcctcctcgcc 65646
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 121469 gtctcctcctcctcctcgcc 121488
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 117788 tctcctcctcctcctcgccc 117769
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 7394 tctcctcctcctcctcgccc 7375
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 27628 tctcctcctcctcctcgccc 27647
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 104944 tctcctcctcctcctcgccc 104963
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0009H10 Length = 175754 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 10693 gtctcctcctcctcctcgcc 10674
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctgtctcctcctcctcctcg 115 |||||||||||||||||||| Sbjct: 30788 ctgtctcctcctcctcctcg 30807
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctgtctcctcctcctcctcg 115 |||||||||||||||||||| Sbjct: 30325 ctgtctcctcctcctcctcg 30344
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0527E02 Length = 176826 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 149725 ctcctcctcctcctcgcccg 149706
>dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519B12 Length = 147542 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 18277 ctcctcctcctcctcgcccg 18258
>emb|AL845160.8| Mouse DNA sequence from clone RP23-303O15 on chromosome 2, complete sequence Length = 170074 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 68424 gctgtctcctcctcctcctc 68405
>dbj|AK119506.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-F05, full insert sequence Length = 2042 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 155 gctgtctcctcctcctcctc 136
>ref|XM_308974.2| Anopheles gambiae str. PEST ENSANGP00000020363 (ENSANGG00000017874), partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 100 ctcctcctcctcctcgcccggttcctcg 127 ||||||||||||||||||| ||||||| Sbjct: 381 ctcctcctcctcctcgcccacttcctcg 354
>dbj|AK104190.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C07, full insert sequence Length = 1006 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 gcggtgagcgggagcaggagcagcaggc 323 |||| |||| |||||||||||||||||| Sbjct: 188 gcggcgagcaggagcaggagcagcaggc 215
>dbj|AK104012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D09, full insert sequence Length = 1009 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 gcggtgagcgggagcaggagcagcaggc 323 |||| |||| |||||||||||||||||| Sbjct: 191 gcggcgagcaggagcaggagcagcaggc 218
>dbj|AK100997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146N12, full insert sequence Length = 3201 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 167 gtctcctcctcctcctcgcc 186
>dbj|AK073599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050J23, full insert sequence Length = 1060 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 gcggtgagcgggagcaggagcagcaggc 323 |||| |||| |||||||||||||||||| Sbjct: 224 gcggcgagcaggagcaggagcagcaggc 251
>dbj|AK066437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067M23, full insert sequence Length = 1304 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 cggcgccggagatggaggtg 280 |||||||||||||||||||| Sbjct: 54 cggcgccggagatggaggtg 35
>dbj|AK064816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E13, full insert sequence Length = 3224 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gtctcctcctcctcctcgcc 117 |||||||||||||||||||| Sbjct: 46 gtctcctcctcctcctcgcc 65
>dbj|AK061138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-B07, full insert sequence Length = 1205 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 34 gctgtctcctcctcctcctc 15
>gb|AY108769.1| Zea mays PCO138266 mRNA sequence Length = 1388 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 44 gctgtctcctcctcctcctc 25
>gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232977 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 16775 gctgtctcctcctcctcctc 16794
>gb|AC154011.3| Mus musculus 6 BAC RP24-261O15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 146781 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 120698 gctgtctcctcctcctcctc 120717
>gb|AE003763.3| Drosophila melanogaster chromosome 3R, section 101 of 118 of the complete sequence Length = 206189 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 agcgggagcaggagcagcag 321 |||||||||||||||||||| Sbjct: 81150 agcgggagcaggagcagcag 81131
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ggagcaggagcagcaggcac 325 |||||||||||||||||||| Sbjct: 64003 ggagcaggagcagcaggcac 63984
>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete sequence Length = 307201 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gagcgggagcaggagcagca 320 |||||||||||||||||||| Sbjct: 268093 gagcgggagcaggagcagca 268112
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 ctccggcgagacggcgccggagatggag 277 |||||||| |||||||||||||| |||| Sbjct: 3480127 ctccggcgggacggcgccggagagggag 3480100
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 actctctttgattaggagggaggg 189 ||||| |||||||||||||||||| Sbjct: 10221968 actctgtttgattaggagggaggg 10221945
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cgagacggcgccggagatggaggt 279 ||||||| |||||||||||||||| Sbjct: 104894 cgagacgccgccggagatggaggt 104871
>emb|CT030186.13| Mouse DNA sequence from clone RP23-80I4 on chromosome 12, complete sequence Length = 228891 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 216659 gctgtctcctcctcctcctc 216678
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctcctcgcccg 119 |||||||||||||||||||| Sbjct: 193941 ctcctcctcctcctcgcccg 193960
>gb|AC003971.1|AC003971 Human BAC 367D17 from chromosome 18, complete sequence Length = 87978 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggagcaggagcagcaggca 324 |||||||||||||||||||| Sbjct: 69956 gggagcaggagcagcaggca 69975
>gb|BC029665.1| Mus musculus Dicer1, Dcr-1 homolog (Drosophila), mRNA (cDNA clone IMAGE:5362680), with apparent retained intron Length = 1575 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gctgtctcctcctcctcctc 114 |||||||||||||||||||| Sbjct: 125 gctgtctcctcctcctcctc 106
>gb|U22108.1|SSU22108 Sus scrofa G protein-coupled receptor gene, complete cds Length = 2564 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gagggagggcgggaagaggt 200 |||||||||||||||||||| Sbjct: 1515 gagggagggcgggaagaggt 1496
>emb|AL806510.12| Mouse DNA sequence from clone RP23-155P8 on chromosome 4, complete sequence Length = 95087 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tctcctcctcctcctcgccc 118 |||||||||||||||||||| Sbjct: 12939 tctcctcctcctcctcgccc 12920
>gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosome 1, complete sequence Length = 206081 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 tcctgctgtctcctcctcctcctc 114 |||| ||||||||||||||||||| Sbjct: 136051 tcctcctgtctcctcctcctcctc 136028
>gb|M84606.1|DRODUSKY Drosophila melanogaster transmembrane protein (dusky) mRNA, complete cds Length = 3962 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ggagcaggagcagcaggcac 325 |||||||||||||||||||| Sbjct: 957 ggagcaggagcagcaggcac 976 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,188,602 Number of Sequences: 3902068 Number of extensions: 4188602 Number of successful extensions: 479433 Number of sequences better than 10.0: 201 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 474069 Number of HSP's gapped (non-prelim): 5363 length of query: 483 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 461 effective length of database: 17,147,199,772 effective search space: 7904859094892 effective search space used: 7904859094892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
