ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl21h11 |
|---|---|
| Clone Library Name | barley_pub |
>COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 964 Score = 78.2 bits (191), Expect = 4e-15 Identities = 36/85 (42%), Positives = 54/85 (63%) Frame = +3 Query: 141 PCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVL 320 PC +++ ++K DLE D K+E +KR + LLLNGE P L +T++R+VL Sbjct: 6 PCYTIINSPDLEVTNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFVL 65 Query: 321 PSEDHTIQKLLLLYLEIIDKRDAAG 395 P ++HTI+KLLL++ EI+ K A G Sbjct: 66 PVQNHTIKKLLLIFWEIVPKTSADG 90
>COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 953 Score = 77.4 bits (189), Expect = 8e-15 Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%) Frame = +3 Query: 129 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 305 A + C L++ S + +K DLE DV +K EA+K+ ++++LNGE LP L +T+ Sbjct: 3 AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62 Query: 306 VRYVLPSEDHTIQKLLLLYLEIIDKRDAAG 395 +R+VLP +DHTI+KLLL++ EI+ K G Sbjct: 63 IRFVLPLQDHTIKKLLLVFWEIVPKTTPDG 92
>COPB_MOUSE (Q9JIF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 953 Score = 77.4 bits (189), Expect = 8e-15 Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%) Frame = +3 Query: 129 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 305 A + C L++ S + +K DLE DV +K EA+K+ ++++LNGE LP L +T+ Sbjct: 3 AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62 Query: 306 VRYVLPSEDHTIQKLLLLYLEIIDKRDAAG 395 +R+VLP +DHTI+KLLL++ EI+ K G Sbjct: 63 IRFVLPLQDHTIKKLLLVFWEIVPKTTPDG 92
>COPB_HUMAN (P53618) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 953 Score = 77.4 bits (189), Expect = 8e-15 Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%) Frame = +3 Query: 129 AMDKPCTLLVHFDKGSAAMAN-EIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITV 305 A + C L++ S + +K DLE DV +K EA+K+ ++++LNGE LP L +T+ Sbjct: 3 AAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTI 62 Query: 306 VRYVLPSEDHTIQKLLLLYLEIIDKRDAAG 395 +R+VLP +DHTI+KLLL++ EI+ K G Sbjct: 63 IRFVLPLQDHTIKKLLLVFWEIVPKTTPDG 92
>COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 940 Score = 57.8 bits (138), Expect = 6e-09 Identities = 28/84 (33%), Positives = 49/84 (58%) Frame = +3 Query: 144 CTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLP 323 C LV D A + +K LE + K+ AMK + +++NG++LP++ + V+R+V+P Sbjct: 3 CWTLVQQDFLEAPSVDALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVMP 62 Query: 324 SEDHTIQKLLLLYLEIIDKRDAAG 395 S + ++KLL Y E+ K + G Sbjct: 63 SRNKELKKLLYYYWEVCPKYNNDG 86
>COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 973 Score = 48.1 bits (113), Expect = 5e-06 Identities = 23/61 (37%), Positives = 40/61 (65%) Frame = +3 Query: 198 KADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLPSEDHTIQKLLLLYLEIID 377 KA +GSD K++ MK ++ +L G +P L + ++R+V+PS++ ++KLL Y EI+ Sbjct: 30 KALEKGSD-EQKIDTMKSILVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFYWEIVP 88 Query: 378 K 380 K Sbjct: 89 K 89
>MAM1_SCHPO (P78966) Mating factor M secretion protein mam1 (Multiple drug| resistance protein homolog) (P-glycoprotein) Length = 1336 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/77 (28%), Positives = 40/77 (51%) Frame = +3 Query: 102 PARLHGRSGAMDKPCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGET 281 P LH +SG + P + FD S A + + L ++V+ +EA ++ ++ ++G Sbjct: 1082 PGNLH-KSGYLKFPLVGKIEFDGVSFAYPDSERNHLALNNVSLSIEAREKVAIVGISGSG 1140 Query: 282 LPTLFITVVRYVLPSED 332 TL + ++R PSED Sbjct: 1141 KSTL-VELLRKTYPSED 1156
>DAB1_MACFA (Q9BGX5) Disabled homolog 1| Length = 555 Score = 31.2 bits (69), Expect = 0.62 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 6/30 (20%) Frame = +1 Query: 10 PVNHSPPLPAPRSRSTS------AADPTTD 81 P +SPP PAPR S S A+DPTTD Sbjct: 477 PSTNSPPTPAPRQSSPSKSSASHASDPTTD 506
>DAB1_HUMAN (O75553) Disabled homolog 1| Length = 555 Score = 31.2 bits (69), Expect = 0.62 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 6/30 (20%) Frame = +1 Query: 10 PVNHSPPLPAPRSRSTS------AADPTTD 81 P +SPP PAPR S S A+DPTTD Sbjct: 477 PSTNSPPTPAPRQSSPSKSSASHASDPTTD 506
>ATL4L_ARATH (Q9ZT49) RING-H2 finger protein ATL4L (RING-H2 zinc finger protein| RHA3b) Length = 200 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -1 Query: 214 PSRSALISFAMAAEPLSKWTSSVHGLSMAPDLPCSRAG 101 P L A+ A P S +T+S + A DLPCS G Sbjct: 68 PPNKGLKKKALQALPKSTYTASASTAAAADDLPCSSVG 105
>YNP2_YEAST (P53901) Hypothetical 46.2 kDa protein in YCK2-RPC8 intergenic| region Length = 409 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +3 Query: 18 PLPPSSGSQISIHLRRRSNHRYPTRRRPPARL 113 PLP +S S + R N PTR+RPP RL Sbjct: 381 PLPTTSNSNFN----SRKNSMSPTRKRPPPRL 408
>RSNL2_MOUSE (Q8CI96) Restin-like protein 2| Length = 704 Score = 29.3 bits (64), Expect = 2.4 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%) Frame = +3 Query: 165 DKG---SAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLPSEDH 335 DKG + + + + LE +D AA + +K+ +LL+ LP T + VLP+ DH Sbjct: 218 DKGQIPAEVVPDPVDMPLEMADAAAIAKEIKQ---MLLDAVPLPC---TSAKAVLPNSDH 271 Query: 336 TIQKLLL--LYLEIIDKRDAAG 395 T + +L L L++ D+ AG Sbjct: 272 TTSRAMLTSLGLKLGDRVVIAG 293
>S27A3_HUMAN (Q5K4L6) Long-chain fatty acid transport protein 3 (EC 6.2.1.-)| (Fatty acid transport protein 3) (FATP-3) (Very long-chain acyl-CoA synthetase homolog 3) (VLCS-3) (Solute carrier family 27 member 3) Length = 683 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = -3 Query: 131 GAGSAVQPRRRATACGVSVVGSAAEVDRDLGAGRGG 24 G GSA + R A G + GS AE GA RGG Sbjct: 123 GEGSAGEGERAAPGAGDAAAGSGAEFAGGDGAARGG 158
>ISPG_AQUAE (O67496) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 357 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 Query: 89 CGVSVVGSAAEVDRDLGAGRGGEWL 15 C V+ +G A E D L GRG WL Sbjct: 300 CVVNAIGEAREADIGLACGRGFAWL 324
>ANPRC_RAT (P41740) Atrial natriuretic peptide clearance receptor precursor| (ANP-C) (ANPRC) (NPR-C) (Atrial natriuretic peptide C-type receptor) Length = 535 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/44 (25%), Positives = 26/44 (59%) Frame = +3 Query: 204 DLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLPSEDH 335 DL+ D+ ++ +R V++ +G+T+ + + V R+ + S D+ Sbjct: 236 DLDLDDIVRYIQGSERVVIMCASGDTIRRIMLAVHRHGMTSGDY 279
>POTE8_HUMAN (Q6S8J7) Prostate, ovary, testis expressed protein on chromosome 8| Length = 498 Score = 28.5 bits (62), Expect = 4.0 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Frame = +3 Query: 132 MDKPCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGE--TLPTLF-IT 302 +D+ C L V K A+ ++ + + A+MLL +G LP ++ T Sbjct: 119 LDRQCQLHVFDSKKRTALIKAVQCQED-----------ECALMLLQHGTDPNLPDMYGNT 167 Query: 303 VVRYVLPSEDHTIQKLLLLYLEIIDKRDAAG 395 + Y + +ED + K LLLY I+ ++ G Sbjct: 168 ALHYAVYNEDKLMAKTLLLYGADIESKNKGG 198
>ANPRC_MOUSE (P70180) Atrial natriuretic peptide clearance receptor precursor| (ANP-C) (ANPRC) (NPR-C) (Atrial natriuretic peptide C-type receptor) (EF-2) Length = 536 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/44 (25%), Positives = 26/44 (59%) Frame = +3 Query: 204 DLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVRYVLPSEDH 335 DL+ D+ ++ +R V++ +G+T+ + + V R+ + S D+ Sbjct: 236 DLDLDDIVRYIQGSERVVIMCASGDTIRRIMLAVHRHGMTSGDY 279
>DRD2_RAT (P61169) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 444 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -1 Query: 307 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 143 T +MKS G RR M A A L ++TS P R+ + L+ S H Sbjct: 254 TVIMKSNGSFPVNRRRMDAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313 Query: 142 GLSMAPDLP 116 GL PD P Sbjct: 314 GLHSNPDSP 322
>DRD2_MOUSE (P61168) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 444 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -1 Query: 307 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 143 T +MKS G RR M A A L ++TS P R+ + L+ S H Sbjct: 254 TVIMKSNGSFPVNRRRMDAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313 Query: 142 GLSMAPDLP 116 GL PD P Sbjct: 314 GLHSNPDSP 322
>SOS2_HUMAN (Q07890) Son of sevenless homolog 2 (SOS-2)| Length = 1332 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = +1 Query: 19 HSPPLPAPRSRSTSAADPTTDTPHAVALR 105 HSPP P PR DP DTP V LR Sbjct: 1201 HSPPPPPPR-------DPLPDTPPPVPLR 1222
>IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)| Length = 654 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 7/45 (15%) Frame = +3 Query: 24 PPSSGSQISIHLR-------RRSNHRYPTRRRPPARLHGRSGAMD 137 PPS G +SIH R R +HR P R R HG + D Sbjct: 557 PPSPGEYVSIHFRAPPEEDLREGSHRCPKR----VRFHGGAALGD 597
>ROR1_HUMAN (Q01973) Tyrosine-protein kinase transmembrane receptor ROR1| precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase, receptor-related 1) Length = 937 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +1 Query: 13 VNHSPPLPAPRSRSTSAADPTTDTPHAVAL 102 + H PP P+SRS S+A +T T H +L Sbjct: 845 IQHCPP---PKSRSPSSASGSTSTGHVTSL 871
>HCY2E_RAPTH (P83040) Hemocyanin type 2 unit e (RtH2-e)| Length = 413 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 7/75 (9%) Frame = -1 Query: 325 EGRT*RTTVMKSVGRVSPLRRSMTARFMASTLAATSLPSRSALISFAMAAEPL------- 167 +G T R V KSV +SP R + S +S +L SF A PL Sbjct: 3 QGHTHRNLVRKSVRNLSPAERRSLVHALKSLQEDSSADGFQSLASF-HAQPPLCPYPEAN 61 Query: 166 SKWTSSVHGLSMAPD 122 ++ VHG++ P+ Sbjct: 62 KRFACCVHGMATFPE 76
>TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily member 10C| precursor (Decoy receptor 1) (DcR1) (Decoy TRAIL receptor without death domain) (TNF-related apoptosis-inducing ligand receptor 3) (TRAIL receptor 3) (TRAIL-R3) (Trail receptor wi Length = 259 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/40 (35%), Positives = 16/40 (40%) Frame = +1 Query: 13 VNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 132 +N SP PAP + T P T P A PAP Sbjct: 183 MNTSPGTPAPAAEETMTTSPGTPAPAAEETMTTSPGTPAP 222
>NU2C_PROMM (Q7V626) NAD(P)H-quinone oxidoreductase chain 2 (EC 1.6.5.-)| (NAD(P)H dehydrogenase I, chain 2) (NDH-1, chain 2) Length = 523 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -1 Query: 232 LAATSLPSRSALISFAMAAEPLSKWTSSVHGLSMAP 125 LAA SL A ++F +AA P +WT V+ S P Sbjct: 222 LAALSLVFVLATVAFKIAAVPFHQWTPDVYEGSPTP 257
>SOCS1_MOUSE (O35716) Suppressor of cytokine signaling 1 (SOCS-1) (JAK-binding| protein) (JAB) (STAT-induced STAT inhibitor 1) (SSI-1) Length = 212 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +1 Query: 16 NHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 132 N P PR RS ++ ++ +P A R C A PAP Sbjct: 11 NAISPAAEPRRRSEPSSSSSSSSPAAPVRPRPCPAVPAP 49
>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 63 RRSNHRYPTRRRPPARLHGRSGA 131 RR ++R P RRRP R H RS A Sbjct: 409 RRDSYRDPYRRRPGDRSHSRSPA 431
>NHK1_DROME (Q7KRY6) Nucleosomal histone kinase 1 (EC 2.7.11.1) (Protein| baellchen) Length = 599 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 Query: 10 PVNHSPPLPAPRSRSTSAADPTTDTPHAVALR 105 P + P +P+ RST A P TP A LR Sbjct: 443 PRERATPKASPKPRSTPKASPKPQTPTAARLR 474
>DAB1_MOUSE (P97318) Disabled homolog 1| Length = 588 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%) Frame = +1 Query: 10 PVNHSPPLPAPRSRSTS------AADPTTD 81 P +SPP PAPR S S +DPT D Sbjct: 510 PSTNSPPTPAPRQSSPSKSSASHVSDPTAD 539
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 4 FAPVNHSPPLPAPRSRSTSAADPTTDTP 87 +A N +P +P PR AA+PTT P Sbjct: 74 YALDNTTPTVPTPRVIQAEAANPTTSNP 101
>CS016_HUMAN (Q8ND99) Protein C19orf16| Length = 567 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +1 Query: 7 APVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 132 AP +P +PAP ++ + P+ A A R +A PAP Sbjct: 110 APSQKAPAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAP 151
>YPNA_THIRO (Q83WU4) UPF0085 protein in pntA-hypC2 intergenic region (Orf2)| Length = 271 Score = 27.3 bits (59), Expect = 9.0 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Frame = +3 Query: 99 PPARLHGRSGAMDKPCTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLL--- 269 PP+R GRS A+ KP + + AMAN D + + RA ++L+ Sbjct: 104 PPSRKSGRSHAITKPSYYTKRIEAINFAMAN---------DDGIRPDNFHRADVVLIGVS 154 Query: 270 -NGETLPTLFITVVRYVLPSEDHTI 341 +G+T PT + Y L S ++ + Sbjct: 155 RSGKT-PTCLYLAMHYGLRSANYPV 178
>VGLC_HHV2H (Q89730) Glycoprotein C precursor| Length = 480 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/39 (30%), Positives = 18/39 (46%) Frame = +1 Query: 16 NHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 132 +++ P +PR+ S PT P + TA PAP Sbjct: 42 SNAAPSASPRNASAPRTTPTPPQPRKATKSKASTAKPAP 80
>VGLC_HHV23 (P06475) Glycoprotein C precursor| Length = 480 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/39 (30%), Positives = 18/39 (46%) Frame = +1 Query: 16 NHSPPLPAPRSRSTSAADPTTDTPHAVALRRGCTADPAP 132 +++ P +PR+ S PT P + TA PAP Sbjct: 42 SNAAPSASPRNASAPRTTPTPPQPRKATKSKASTAKPAP 80
>DRD2_PANTR (P60026) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -1 Query: 307 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 143 T +MKS G RR + A A L ++TS P R+ + L+ S H Sbjct: 254 TVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313 Query: 142 GLSMAPDLP 116 GL PD P Sbjct: 314 GLHSTPDSP 322
>DRD2_HUMAN (P14416) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -1 Query: 307 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 143 T +MKS G RR + A A L ++TS P R+ + L+ S H Sbjct: 254 TVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313 Query: 142 GLSMAPDLP 116 GL PD P Sbjct: 314 GLHSTPDSP 322
>DRD2_CERAE (P52702) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -1 Query: 307 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 143 T +MKS G RR + A A L ++TS P R+ + L+ S H Sbjct: 254 TVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313 Query: 142 GLSMAPDLP 116 GL PD P Sbjct: 314 GLHSTPDSP 322
>DRD2_BOVIN (P20288) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 444 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -1 Query: 307 TTVMKSVGRVSPLRRSMTARFMASTL-----AATSLPSRSALISFAMAAEPLSKWTSSVH 143 T +MKS G RR + A A L ++TS P R+ + L+ S H Sbjct: 254 TVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHH 313 Query: 142 GLSMAPDLP 116 GL PD P Sbjct: 314 GLHSTPDSP 322
>SAHH3_MOUSE (Q68FL4) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3) Length = 613 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = +1 Query: 7 APVNHSPPLPAPRSRSTSAADPTT-DTPHAVALRR 108 AP PP P P S T+A P P A A++R Sbjct: 56 APAAERPPAPGPGSGPTAALSPAAGKVPQASAMKR 90
>PANK4_HUMAN (Q9NVE7) Pantothenate kinase 4 (EC 2.7.1.33) (Pantothenic acid| kinase 4) (hPanK4) Length = 773 Score = 27.3 bits (59), Expect = 9.0 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 13/76 (17%) Frame = +3 Query: 141 PCTLLVHFDKGSAAMANEIKADL---EGS--------DVAAKVEAMKRAVM--LLLNGET 281 PC L DKG AA+ E ADL EG A + E++K AV+ L Sbjct: 698 PCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERL 757 Query: 282 LPTLFITVVRYVLPSE 329 LF + +Y +P+E Sbjct: 758 GGRLFSVIFKYEVPAE 773
>GCM2_DROME (Q9VLA2) Transcription factor glial cells missing 2 (Protein| glide-2) Length = 613 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -1 Query: 247 FMASTLAATSLPSRSALISFAMAAEPLSKWTSSVHGLSMAPDLP 116 + A+ AAT+ PS+S + +A + L+ + S G S A +P Sbjct: 359 YHATPAAATAAPSKSPSLPYACSISELAAYQQSSSGNSFAMGVP 402
>MYCLB_XENLA (P35805) L-myc B protein (L-myc 2 protein)| Length = 344 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = +3 Query: 3 LRSCQPLPP----SSGSQISIHLRRRSNHRYPTRRR 98 L+ C P P +SGS S L +R NH Y R+R Sbjct: 238 LQPCSPQMPDSPLASGSSDSEDLAKRKNHNYLERKR 273
>FREM2_MOUSE (Q6NVD0) FRAS1-related extracellular matrix protein 2 precursor| (ECM3 homolog) (NV domain-containing protein 1) Length = 3160 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +3 Query: 261 LLLNGETLPTLFITVVRYVLPSEDHTIQKLLLLYLEIIDKRDAA 392 L L+ T L + + Y PSED ++L L LEI+D AA Sbjct: 371 LPLSSFTQRDLRLLKIAYQPPSEDSDQERLFELELEIVDPEGAA 414
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = +1 Query: 10 PVNHSPPLPAPRSRSTSAADPTTDTPHAVALRRG-----CTADPAP 132 P + +PP A +S+SA P T P ++A + G T+ PAP Sbjct: 175 PGSTTPPGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAP 220
>ZN576_HUMAN (Q9H609) Zinc finger protein 576| Length = 170 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 9/66 (13%) Frame = -1 Query: 271 LRRSMTARFMASTL---------AATSLPSRSALISFAMAAEPLSKWTSSVHGLSMAPDL 119 ++R A F+A L A S PS ALI+ + P +K T V + P Sbjct: 53 MKREHPADFVAQKLQGVLFICFTCARSFPSSKALITHQRSHGPAAKPTLPVATTTAQPTF 112 Query: 118 PCSRAG 101 PC G Sbjct: 113 PCPDCG 118
>RP54_RHOCA (P09433) RNA polymerase sigma-54 factor| Length = 426 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -1 Query: 292 SVGRVSPLRRSMTARFMAST-LAATSLPSRSALISFAMAAEPLSKWTSSVHGLSMAPDLP 116 +VG V+ + S+ A + +A T P R + FA A EP S+ +++A + Sbjct: 65 AVGAVAAHKPSLMAHVVDQIEMAFTETPDRLLALRFAEALEPSGWLGQSLDSIALAAGVS 124 Query: 115 CSRA 104 SRA Sbjct: 125 LSRA 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,368,924 Number of Sequences: 219361 Number of extensions: 706182 Number of successful extensions: 3530 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3513 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
