>Y304_ENCCU (Q8SW83) Hypothetical protein ECU03_0040|
          Length = 268

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +3

Query: 186 WSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSVDPIQRWR 314
           W SHN P+G +++T+  TL + L+L F I++ + ++  PI +W+
Sbjct: 79  WKSHNKPEGILHTTLYYTL-NLLLLAFSIISILSITTLPINKWK 121

>Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850|
          Length = 268

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = +3

Query: 186 WSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSVDPIQRWR 314
           W SHN P+G +++T+  TL + L L F I++ + ++  PI +W+
Sbjct: 79  WKSHNKPEGILHTTLYYTL-NLLFLAFSIISILSITTLPINKWK 121

>GP53_BPSP1 (O48407) Putative gene 53 protein|
          Length = 221

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 287 QLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQE 150
           +L +  N+E Q  +  + SL S  + TL    +P   AD LEE +E
Sbjct: 94  RLQILVNKEVQGSQSTQQSLSSVFESTLEKYNSPDDFADYLEETEE 139

>SYFA_BARQU (Q6G0Y4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 361

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -3

Query: 311 PPLNWI-NRQLDL--SKNEEAQDQEMNKSSLHSTVDLTLRVMRTPL 183
           P LN + NR L+L   K +  + Q MNK     TVD+TL V  +PL
Sbjct: 58  PVLNGLKNRVLELWVQKRDLLRRQAMNKRLSRETVDVTLPVRSSPL 103

>TRPB_CHLTE (Q8KF11) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 400

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -3

Query: 266 EEAQDQEMNKSSLHSTVDLTLR--VMR-TPLVHADRLEEAQESGRI 138
           EE   +  N    H T+D  LR  V R TPL HA RL E Q   +I
Sbjct: 36  EEEYLKAKNDPEFHQTLDNLLRHYVGRPTPLYHASRLSEKQGGAQI 81

>SYS_TREDE (Q73KB2) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 422

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 21/95 (22%), Positives = 40/95 (42%)
 Frame = -3

Query: 293 NRQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRIGGHKLPRI 114
           N Q D + N ++  Q+++       VD    +          L EA+++      K+P +
Sbjct: 46  NLQKDRNDNSQSMKQKLSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNM 105

Query: 113 ANPSAPDFILGREGRRSSKKNEAF*LKTFSQSPKN 9
           A+P AP   +G+E   + +      +  F   PK+
Sbjct: 106 AHPEAP---VGKEDSDNLEVKRCGTVPKFDFEPKD 137

>OPSR_ORYLA (P87367) Red-sensitive opsin (Red cone photoreceptor pigment)|
           (KFH-R)
          Length = 357

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +1

Query: 178 WTNGVLITLKVRSTVLCSELLFISWSWASSFLLKSSCLLIQFKGGDECGVQ 330
           W  G ++   V S V C+  +F  WS      LK+SC    F G D+ GVQ
Sbjct: 165 WAIGGIVFSWVWSAVWCAPPVF-GWSRYWPHGLKTSCGPDVFSGSDDPGVQ 214

>RS14_LEIXX (Q6ABY6) 30S ribosomal protein S14|
          Length = 101

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 197 MRTPLVHADRLEEAQESGRIGGHKLPRIANP 105
           ++  LV  +  +E++E+ R+G  KLPR A+P
Sbjct: 27  LKKALVDPNGTDESREAARLGLQKLPRDASP 57

>NU5M_BRALA (O79422) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 598

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +1

Query: 127 LWPPIRPDSCASSSRSAWTNGVLITLKVRSTVLCSELLFISWSWASSFLLKSSCLLIQFK 306
           L+  I+     S   + + N VL+++ + S    SE+LF+ W W     L    L+I F+
Sbjct: 20  LFSKIKSSFAESVKYAGYMNAVLLSILLMSDE--SEMLFLKWEWVK---LGGYSLMISFR 74

>E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-alpha kinase 4|
           (EC 2.7.11.1) (GCN2-like protein)
          Length = 1649

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
 Frame = -3

Query: 290 RQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRI-------GG 132
           R L+  + EE + +E+         ++     R  +   +RLE A  S +        GG
Sbjct: 160 RLLEAKRKEEQEQREILHEIQRRKEEIKEEKKRKEMAKQERLEIASLSNQDHTSKKDPGG 219

Query: 131 HKLPRIANPSAPDFILGREGRRSS 60
           H+   I +  +PDF+   + R +S
Sbjct: 220 HRTAAILHGGSPDFVGNGKHRANS 243

>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -3

Query: 266 EEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRIGGHKLPRI 114
           +E + QE  +S    T  + L    +  V +      QE  R+GGH LP++
Sbjct: 715 DELEIQEETESGSSVTSKIRLPTQPSWYVQSFLFSLCQEVNRVGGHALPKV 765

>NU5M_BRAFL (O47430) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 599

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +1

Query: 127 LWPPIRPDSCASSSRSAWTNGVLITLKVRSTVLCSELLFISWSWASSFLLKSSCLLIQFK 306
           L+  I+     S   + + N VL+++ + S    SE+LF+ W W     L    L+I F+
Sbjct: 20  LFSKIKSSFAESVKYAGYMNAVLLSILLMSDE--SEMLFLKWEWVK---LGGYSLMISFR 74

>NET1_MOUSE (O09118) Netrin-1 precursor|
          Length = 604

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 84  QNKIRGRRICNSGELVASNPP*FLR-LLQPIRMDQWSSHN 200
           + ++R   +CNS +   ++PP FL  L  P  +  W S N
Sbjct: 85  EERVRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSEN 124

>NIFJ_RHORT (Q53046) Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)|
          Length = 1191

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 170 RLEEAQESGRIGGHKLPRIANPSAPDFI 87
           RL+     G + GH LP + +  APDF+
Sbjct: 619 RLQSVTIPGVLTGHALPPLVSAGAPDFV 646

>TAAR1_PANTR (Q5QD29) Trace amine-associated receptor 1 (Trace amine receptor 1)|
           (TaR-1)
          Length = 339

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 205 KVRSTVLCSELLFISWSWASSFLLKSSCLLIQFKGGDE 318
           K+   V+C  ++FISWS  + F      L + FKG +E
Sbjct: 134 KINILVICV-MIFISWSVPAVFAFGMIFLELNFKGAEE 170


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,100,714
Number of Sequences: 219361
Number of extensions: 945396
Number of successful extensions: 2816
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2816
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)