Clone Information

BLAST Search Result

Clone Name	bastl21h07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CHX10_CHICK (Q9IAL1) Homeobox protein Chx10 (Ceh-10 homeodomain-...	32	0.47
2	MARK1_RAT (O08678) Serine/threonine-protein kinase MARK1 (EC 2.7...	31	1.0
3	MARK1_MOUSE (Q8VHJ5) Serine/threonine-protein kinase MARK1 (EC 2...	31	1.4
4	HS12B_MOUSE (Q9CZJ2) Heat shock 70 kDa protein 12B	31	1.4
5	ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V...	30	1.8
6	K0329_HUMAN (O15040) Protein KIAA0329/KIAA0297	30	1.8
7	RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (R...	30	1.8
8	1B82_HUMAN (Q29718) HLA class I histocompatibility antigen, B-82...	30	2.3
9	1B59_HUMAN (Q29940) HLA class I histocompatibility antigen, B-59...	30	2.3
10	1B56_HUMAN (P30495) HLA class I histocompatibility antigen, B-56...	30	2.3
11	1B55_HUMAN (P30493) HLA class I histocompatibility antigen, B-55...	30	2.3
12	MARK3_HUMAN (P27448) MAP/microtubule affinity-regulating kinase ...	30	3.0
13	1B04_GORGO (P30382) Class I histocompatibility antigen, GOGO-B02...	30	3.0
14	1C17_HUMAN (Q95604) HLA class I histocompatibility antigen, Cw-1...	30	3.0
15	1B47_HUMAN (P30485) HLA class I histocompatibility antigen, B-47...	30	3.0
16	1B44_HUMAN (P30481) HLA class I histocompatibility antigen, B-44...	30	3.0
17	V70K_TYMVA (P20131) 69 kDa protein	30	3.0
18	V70K_TYMVC (P28478) 69 kDa protein	29	3.9
19	1B78_HUMAN (P30498) HLA class I histocompatibility antigen, B-78...	29	3.9
20	1B58_HUMAN (P10319) HLA class I histocompatibility antigen, B-58...	29	3.9
21	1B54_HUMAN (P30492) HLA class I histocompatibility antigen, B-54...	29	3.9
22	1B53_HUMAN (P30491) HLA class I histocompatibility antigen, B-53...	29	3.9
23	1B52_HUMAN (P30490) HLA class I histocompatibility antigen, B-52...	29	3.9
24	1B51_HUMAN (P18464) HLA class I histocompatibility antigen, B-51...	29	3.9
25	1B35_HUMAN (P30685) HLA class I histocompatibility antigen, B-35...	29	3.9
26	MARK3_RAT (Q8VHF0) MAP/microtubule affinity-regulating kinase 3 ...	29	5.2
27	PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC...	29	5.2
28	V70K_TYMV (P10357) 69 kDa protein	29	5.2
29	MARK3_MOUSE (Q03141) MAP/microtubule affinity-regulating kinase ...	29	5.2
30	1C16_HUMAN (Q29960) HLA class I histocompatibility antigen, Cw-1...	29	5.2
31	1C15_HUMAN (Q07000) HLA class I histocompatibility antigen, Cw-1...	29	5.2
32	1C12_HUMAN (P30508) HLA class I histocompatibility antigen, Cw-1...	29	5.2
33	1C08_HUMAN (P30505) HLA class I histocompatibility antigen, Cw-8...	29	5.2
34	1C05_HUMAN (Q9TNN7) HLA class I histocompatibility antigen, Cw-5...	29	5.2
35	1C03_HUMAN (P04222) HLA class I histocompatibility antigen, Cw-3...	29	5.2
36	MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor (...	28	6.7
37	HS12B_HUMAN (Q96MM6) Heat shock 70 kDa protein 12B	28	6.7
38	1A68_HUMAN (P01891) HLA class I histocompatibility antigen, A-68...	28	6.7
39	1A66_HUMAN (P30457) HLA class I histocompatibility antigen, A-66...	28	6.7
40	1A43_HUMAN (P30456) HLA class I histocompatibility antigen, A-43...	28	6.7
41	1A34_HUMAN (P30453) HLA class I histocompatibility antigen, A-34...	28	6.7
42	1A26_HUMAN (P30450) HLA class I histocompatibility antigen, A-26...	28	6.7
43	1A25_HUMAN (P18462) HLA class I histocompatibility antigen, A-25...	28	6.7
44	1A11_HUMAN (P13746) HLA class I histocompatibility antigen, A-11...	28	6.7
45	1A03_PANTR (P13748) CHLA class I histocompatibility antigen, A-1...	28	6.7
46	SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs...	28	8.8
47	MARK1_HUMAN (Q9P0L2) Serine/threonine-protein kinase MARK1 (EC 2...	28	8.8
48	G6PD_ZYMMO (P21907) Glucose-6-phosphate 1-dehydrogenase (EC 1.1....	28	8.8
49	1B01_PANTR (P13750) CHLA class I histocompatibility antigen, B-1...	28	8.8
50	1B18_HUMAN (P30466) HLA class I histocompatibility antigen, B-18...	28	8.8
51	1B13_HUMAN (P30461) HLA class I histocompatibility antigen, B-13...	28	8.8
52	ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt...	28	8.8
53	1C04_GORGO (P30387) Class I histocompatibility antigen, GOGO-C02...	28	8.8
54	1C03_GORGO (P30386) Class I histocompatibility antigen, GOGO-C02...	28	8.8
55	1C02_GORGO (P30385) Class I histocompatibility antigen, GOGO-C02...	28	8.8
56	1C01_GORGO (P30383) Class I histocompatibility antigen, GOGO-C01...	28	8.8

>CHX10_CHICK (Q9IAL1) Homeobox protein Chx10 (Ceh-10 homeodomain-containing|
           homolog)
          Length = 377

 Score = 32.3 bits (72), Expect = 0.47
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = -2

Query: 242 AGYVPSSGKVSPERRTGWIGVGEILGLQQEGPEH 141
           AG  PSSG  +P R TG+ G+ EILGL +E P H
Sbjct: 34  AGAKPSSGP-TPPRCTGF-GIQEILGLNKEPPSH 65

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>MARK1_RAT (O08678) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase 1)
          Length = 793

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -3

Query: 382 SAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFS 257
           S  AHS S S T    R P GS+ R  F GE+   RRS+ +S
Sbjct: 588 SPSAHSISAS-TPDRTRFPRGSSSRSTFHGEQLRERRSAAYS 628

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>MARK1_MOUSE (Q8VHJ5) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase 1) (ELKL
           motif serine/threonine-protein kinase 3)
          Length = 795

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = -3

Query: 415 PGASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSAEFQLPA 236
           PGA+       S  AHS S S T    R P GS+ R  F GE+   RRS+ ++     P+
Sbjct: 578 PGAAQRVPAA-SPSAHSISAS-TPDRTRFPRGSSSRSTFHGEQLRERRSAAYNGRPASPS 635

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>HS12B_MOUSE (Q9CZJ2) Heat shock 70 kDa protein 12B|
          Length = 685

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +2

Query: 131 PHSRVQALLAATQGSLPLQSIQFVVPDLLFRLMGRSRQLKFR*KT*GSARWVPLSPEFST 310
           PH  ++ L  A+ G      +      LL R+ G     KF+ +    A WV L+  F  
Sbjct: 336 PHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIAKFKRQR--PAAWVDLTIAFEA 393

Query: 311 HRRTRG 328
            +RT G
Sbjct: 394 RKRTAG 399

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>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = -1

Query: 414 QARRWSPGSRAAPGRTLPPFQELAVAQEPPRVL 316
           QARR    + AA GRT PP ++   AQEPP V+
Sbjct: 334 QARRVGEDAAAAEGRT-PPARQPRAAQEPPIVI 365

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>K0329_HUMAN (O15040) Protein KIAA0329/KIAA0297|
          Length = 1411

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -1

Query: 420 SPQARRWSPGSRAAPGRTLPPFQELAVAQEPPRVLRCVENSGESGTHL 277
           +P A +W PG+RA  G  + P QE         +L  +E SG   T+L
Sbjct: 657 APSAEQWLPGTRADEGSPVEPSQE-------QDILTSMEASGHLSTNL 697

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>RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (RGP3)|
          Length = 1198

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 420 SPQARRWSPGSRAAPGRTLPPFQELAVAQEP 328
           SP ++  SPG    PG+ LPP ++    QEP
Sbjct: 704 SPPSKEPSPGQELPPGQDLPPNKDSPSGQEP 734

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>1B82_HUMAN (Q29718) HLA class I histocompatibility antigen, B-82 alpha chain|
           precursor (MHC class I antigen B*82)
          Length = 362

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 32/87 (36%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGK 216
           GAL L    W    + R FY A   PGR EP     RF S     GYV         S  
Sbjct: 15  GALALT-ETWAGSHSMRYFYTAMSRPGRGEP-----RFIS----VGYVDDTQFVRFDSDA 64

Query: 215 VSP--ERRTGWIGVGEILGLQQEGPEH 141
            SP  E R  WI        +QEGPE+
Sbjct: 65  ASPREEPRAPWI--------EQEGPEY 83

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>1B59_HUMAN (Q29940) HLA class I histocompatibility antigen, B-59 alpha chain|
           precursor (MHC class I antigen B*59)
          Length = 362

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/78 (29%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPREEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1B56_HUMAN (P30495) HLA class I histocompatibility antigen, B-56 alpha chain|
           precursor (MHC class I antigen B*56) (Bw-56) (Bw-22)
          Length = 362

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/78 (29%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPREEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1B55_HUMAN (P30493) HLA class I histocompatibility antigen, B-55 alpha chain|
           precursor (MHC class I antigen B*55) (Bw-55) (B-12)
          Length = 362

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/78 (29%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPREEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>MARK3_HUMAN (P27448) MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1)|
           (Cdc25C-associated protein kinase 1) (cTAK1) (C-TAK1)
           (Serine/threonine protein kinase p78) (Ser/Thr protein
           kinase PAR-1) (Protein kinase STK10)
          Length = 776

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -3

Query: 388 TRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSAEFQLPATSHQA 221
           T  A  HS S + T    R P G+  R  F G+    RR++ ++     P+ SH+A
Sbjct: 559 TPVASTHSISSAATPDRIRFPRGTASRSTFHGQPR-ERRTATYNGPPASPSLSHEA 613

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>1B04_GORGO (P30382) Class I histocompatibility antigen, GOGO-B0201 alpha chain|
           precursor
          Length = 363

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGKVSP--ERRT 195
           W    + R F+ A   PGR EP     RF     T GYV         S   SP  E RT
Sbjct: 23  WAGSHSMRYFHTAMSRPGRGEP-----RFI----TVGYVDDTQFVWFDSDAASPRKEPRT 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1C17_HUMAN (Q95604) HLA class I histocompatibility antigen, Cw-17 alpha chain|
           precursor (MHC class I antigen Cw*17)
          Length = 372

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALAL-IETWAGSHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83

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>1B47_HUMAN (P30485) HLA class I histocompatibility antigen, B-47 alpha chain|
           precursor (MHC class I antigen B*47) (Bw-47)
          Length = 362

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 28/78 (35%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGKVSP--ERRT 195
           W    + R FY A   PGR EP     RF     T GYV         S   SP  E R 
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEP-----RFI----TVGYVDDTLFVRFDSDATSPRKEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1B44_HUMAN (P30481) HLA class I histocompatibility antigen, B-44 alpha chain|
           precursor (MHC class I antigen B*44) (Bw-44)
          Length = 362

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 28/78 (35%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGKVSP--ERRT 195
           W    + R FY A   PGR EP     RF     T GYV         S   SP  E R 
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEP-----RFI----TVGYVDDTLFVRFDSDATSPRKEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>V70K_TYMVA (P20131) 69 kDa protein|
          Length = 628

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 24/91 (26%), Positives = 35/91 (38%)
 Frame = +3

Query: 144 FRPFLLQPKDLSHSNPSSSSFRTYFSA*WDVAGS*NSAEKPEDLRDGFRSPRNSRRIVEP 323
           FRP LL      H +P  SS R   S    +  +     +P    + F SPR    + + 
Sbjct: 181 FRPILLPEVVHVHDDPPHSSLRPGRSRSRQLQPT---IRRPLLAPNQFNSPRQPPPLSDD 237

Query: 324 AGVLGPLPVPEMEEECAPALRVIRGSIDAPG 416
            G+LGP P+        P   +  G  +  G
Sbjct: 238 PGILGPCPLAPNSTRDPPPRPITPGPFNTHG 268

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>V70K_TYMVC (P28478) 69 kDa protein|
          Length = 628

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 24/91 (26%), Positives = 35/91 (38%)
 Frame = +3

Query: 144 FRPFLLQPKDLSHSNPSSSSFRTYFSA*WDVAGS*NSAEKPEDLRDGFRSPRNSRRIVEP 323
           FRP LL      H +P  SS R   S    +  +     +P    + F SPR    + + 
Sbjct: 181 FRPILLPKVVHVHDDPPHSSLRPRGSRSRQLQPT---VRRPLLAPNQFHSPRQPPPLSDD 237

Query: 324 AGVLGPLPVPEMEEECAPALRVIRGSIDAPG 416
            G+LGP P+        P   +  G  +  G
Sbjct: 238 PGILGPRPLAPNSTRDPPPRPITPGPSNTHG 268

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>1B78_HUMAN (P30498) HLA class I histocompatibility antigen, B-78 alpha chain|
           precursor (MHC class I antigen B*78)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRTGWIGVGEIL 168
           W    + R FY A   PGR EP    + +        +   +     E R  WI      
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWI------ 76

Query: 167 GLQQEGPEH 141
             +QEGPE+
Sbjct: 77  --EQEGPEY 83

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>1B58_HUMAN (P10319) HLA class I histocompatibility antigen, B-58 alpha chain|
           precursor (MHC class I antigen B*58) (Bw-58)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRTGWIGVGEIL 168
           W    + R FY A   PGR EP    + +        +   +     E R  WI      
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWI------ 76

Query: 167 GLQQEGPEH 141
             +QEGPE+
Sbjct: 77  --EQEGPEY 83

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>1B54_HUMAN (P30492) HLA class I histocompatibility antigen, B-54 alpha chain|
           precursor (MHC class I antigen B*54) (Bw-54) (Bw-22)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83

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>1B53_HUMAN (P30491) HLA class I histocompatibility antigen, B-53 alpha chain|
           precursor (MHC class I antigen B*53) (Bw-53)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRTGWIGVGEIL 168
           W    + R FY A   PGR EP    + +        +   +     E R  WI      
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWI------ 76

Query: 167 GLQQEGPEH 141
             +QEGPE+
Sbjct: 77  --EQEGPEY 83

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>1B52_HUMAN (P30490) HLA class I histocompatibility antigen, B-52 alpha chain|
           precursor (MHC class I antigen B*52) (Bw-52) (B-5)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRTGWIGVGEIL 168
           W    + R FY A   PGR EP    + +        +   +     E R  WI      
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWI------ 76

Query: 167 GLQQEGPEH 141
             +QEGPE+
Sbjct: 77  --EQEGPEY 83

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>1B51_HUMAN (P18464) HLA class I histocompatibility antigen, B-51 alpha chain|
           precursor (MHC class I antigen B*51)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRTGWIGVGEIL 168
           W    + R FY A   PGR EP    + +        +   +     E R  WI      
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWI------ 76

Query: 167 GLQQEGPEH 141
             +QEGPE+
Sbjct: 77  --EQEGPEY 83

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>1B35_HUMAN (P30685) HLA class I histocompatibility antigen, B-35 alpha chain|
           precursor (MHC class I antigen B*35)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRTGWIGVGEIL 168
           W    + R FY A   PGR EP    + +        +   +     E R  WI      
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWI------ 76

Query: 167 GLQQEGPEH 141
             +QEGPE+
Sbjct: 77  --EQEGPEY 83

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>MARK3_RAT (Q8VHF0) MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1)|
          Length = 797

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -3

Query: 388 TRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSAEFQLPATSHQA 221
           T  A  HS S + T    R P G+  R  F G+    RR++ ++     P+ SH+A
Sbjct: 589 TPVASTHSISSATTPDRIRFPRGTASRSTFHGQPR-ERRTATYNGPPASPSLSHEA 643

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>PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC 3.1.3.16)|
          Length = 549

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +3

Query: 168 KDLSHSNPSSSSFRTYFSA*WDVAGS*NSAEKPEDLRDGFRSPRNS 305
           ++ ++S+PSS SF +Y+S+    + S +S  K   L    +SP +S
Sbjct: 152 RESNYSSPSSYSFSSYYSSATSASSSTSSFLKSSGLSSRVKSPSSS 197

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>V70K_TYMV (P10357) 69 kDa protein|
          Length = 628

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = +3

Query: 144 FRPFLLQPKDLSHSNPSSSSFRTYFSA*WDVAGS*NSAEKPEDLRDGFRSPRNSRRIVEP 323
           FRP LL      H +P  SS R   S    +  +     +P    + F SPR    + + 
Sbjct: 181 FRPILLPKVVHVHDDPPHSSLRPRGSRSRQLQPT---VRRPLLAPNQFHSPRQPPPLSDD 237

Query: 324 AGVLGPLPV 350
            G+LGP P+
Sbjct: 238 PGILGPRPL 246

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>MARK3_MOUSE (Q03141) MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1)|
           (MPK-10) (ELKL motif kinase 2)
          Length = 753

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -3

Query: 388 TRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSAEFQLPATSHQA 221
           T  A  HS S + T    R P G+  R  F G+    RR++ ++     P+ SH+A
Sbjct: 536 TPVASTHSISSATTPDRIRFPRGTASRSTFHGQPR-ERRTATYNGPPASPSLSHEA 590

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>1C16_HUMAN (Q29960) HLA class I histocompatibility antigen, Cw-16 alpha chain|
           precursor (MHC class I antigen Cw*16)
          Length = 366

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWACSHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83

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>1C15_HUMAN (Q07000) HLA class I histocompatibility antigen, Cw-15 alpha chain|
           precursor (MHC class I antigen Cw*15)
          Length = 366

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWACSHSMRYFYTAVSRPGRGEPHFIAVGYVDDTQFVRFDSDAASPRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83

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>1C12_HUMAN (P30508) HLA class I histocompatibility antigen, Cw-12 alpha chain|
           precursor (MHC class I antigen Cw*12)
          Length = 366

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWACSHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83

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>1C08_HUMAN (P30505) HLA class I histocompatibility antigen, Cw-8 alpha chain|
           precursor (MHC class I antigen Cw*8)
          Length = 366

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWACSHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83

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>1C05_HUMAN (Q9TNN7) HLA class I histocompatibility antigen, Cw-5 alpha chain|
           precursor (MHC class I antigen Cw*5)
          Length = 366

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWACSHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83

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>1C03_HUMAN (P04222) HLA class I histocompatibility antigen, Cw-3 alpha chain|
           precursor (MHC class I antigen Cw*3)
          Length = 366

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/78 (28%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R FY A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWAGSHSMRYFYTAVSRPGRGEPHFIAVGYVDDTQFVRFDSDAASPRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83

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>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 397 PRITRSAGAHSSSISGTGSGPRTPAGSTMR 308
           PR    +   S++ SG G+GP  P+G+T+R
Sbjct: 482 PRPPEPSQGPSTTSSGGGTGPHPPSGTTLR 511

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>HS12B_HUMAN (Q96MM6) Heat shock 70 kDa protein 12B|
          Length = 686

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = +2

Query: 131 PHSRVQALLAATQGSLPLQSIQFVVPDLLFRLMGRSRQLKFR*KT*GSARWVPLSPEFST 310
           PH  ++ L  A+ G      +      LL R+ G      F+ +    A WV L+  F  
Sbjct: 336 PHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIATFKRQR--PAAWVDLTIAFEA 393

Query: 311 HRRTRG 328
            +RT G
Sbjct: 394 RKRTAG 399

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>1A68_HUMAN (P01891) HLA class I histocompatibility antigen, A-68 alpha chain|
           precursor (MHC class I antigen A*68) (Aw-68) (A-28)
          Length = 365

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L  + W    + R FY +   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-QTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1A66_HUMAN (P30457) HLA class I histocompatibility antigen, A-66 alpha chain|
           precursor (MHC class I antigen A*66) (Aw-66) (A-10)
          Length = 365

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L  + W    + R FY +   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-QTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1A43_HUMAN (P30456) HLA class I histocompatibility antigen, A-43 alpha chain|
           precursor (MHC class I antigen A*43) (Aw-43)
          Length = 365

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L  + W    + R FY +   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-QTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1A34_HUMAN (P30453) HLA class I histocompatibility antigen, A-34 alpha chain|
           precursor (MHC class I antigen A*34) (Aw-34) (A-10)
          Length = 365

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L  + W    + R FY +   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-QTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1A26_HUMAN (P30450) HLA class I histocompatibility antigen, A-26 alpha chain|
           precursor (MHC class I antigen A*26)
          Length = 365

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L  + W    + R FY +   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-QTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1A25_HUMAN (P18462) HLA class I histocompatibility antigen, A-25 alpha chain|
           precursor (MHC class I antigen A*25) (A-10)
          Length = 365

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L  + W    + R FY +   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-QTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1A11_HUMAN (P13746) HLA class I histocompatibility antigen, A-11 alpha chain|
           precursor (MHC class I antigen A*11)
          Length = 365

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L  + W    + R FY +   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-QTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>1A03_PANTR (P13748) CHLA class I histocompatibility antigen, A-108 alpha chain|
           precursor
          Length = 365

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L  + W    + R FY +   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-QTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = -3

Query: 415 PGASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSS 266
           P  + +P+++   G HS++ +G    P  P         + +R PS +S+
Sbjct: 657 PDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSA 706

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>MARK1_HUMAN (Q9P0L2) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase 1)
          Length = 795

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 382 SAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFS 257
           S  AHS S + T    R P GS+ R  F GE+   RRS  ++
Sbjct: 588 SPSAHSIS-TATPDRTRFPRGSSSRSTFHGEQLRERRSVAYN 628

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>G6PD_ZYMMO (P21907) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
          Length = 485

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = -2

Query: 401 GAPDHAQRRGALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSS 222
           G P   +   A+  H  NW+W   P       R+P R    S+I+  F  +  + +  S 
Sbjct: 303 GQPSDTETFVAIKAHVDNWRWQGVPFYIRTGKRLPARR---SEIVVQFKPVPHSIFSSSG 359

Query: 221 GKVSPER 201
           G + P +
Sbjct: 360 GILQPNK 366

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>1B01_PANTR (P13750) CHLA class I histocompatibility antigen, B-1 alpha chain|
           precursor (Fragment)
          Length = 359

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGKVSP--ERRT 195
           W    + R FY +   PGR EP     RF     T GYV         S   SP  E R 
Sbjct: 19  WAGSHSMRYFYTSVSRPGRGEP-----RFI----TVGYVDDTQFVRFDSDAASPRMEPRA 69

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 70  PWI--------EQEGPEY 79

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>1B18_HUMAN (P30466) HLA class I histocompatibility antigen, B-18 alpha chain|
           precursor (MHC class I antigen B*18)
          Length = 362

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/69 (26%), Positives = 27/69 (39%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRTGWIGVGEIL 168
           W    + R F+ +   PGR EP    + +  G     +   +     E R  WI      
Sbjct: 23  WAGSHSMRYFHTSVSRPGRGEPRFISVGYVDGTQFVRFDSDAASPRTEPRAPWI------ 76

Query: 167 GLQQEGPEH 141
             +QEGPE+
Sbjct: 77  --EQEGPEY 83

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>1B13_HUMAN (P30461) HLA class I histocompatibility antigen, B-13 alpha chain|
           precursor (MHC class I antigen B*13)
          Length = 362

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 9/78 (11%)
 Frame = -2

Query: 347 WQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGKVSPER--RT 195
           W    + R FY A   PGR EP     RF     T GYV         S   SP    R 
Sbjct: 23  WAGSHSMRYFYTAMSRPGRGEP-----RFI----TVGYVDDTQFVRFDSDATSPRMAPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            WI        +QEGPE+
Sbjct: 74  PWI--------EQEGPEY 83

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>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like|
           protein)
          Length = 349

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 418 APGASMEPRITRSAGAHSSSISGTGSGPRTPAGST 314
           APG+S    +T   GAHS   S   S   +P GST
Sbjct: 144 APGSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGST 178

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>1C04_GORGO (P30387) Class I histocompatibility antigen, GOGO-C0203 alpha chain|
           precursor
          Length = 366

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGK 216
           GAL L    W    + R FY +   PGR EP     RF S     GYV         S  
Sbjct: 15  GALALT-ETWAGSHSMRYFYTSVSRPGRGEP-----RFIS----VGYVDDTQFVRFDSDA 64

Query: 215 VSP--ERRTGWIGVGEILGLQQEGPEH 141
            SP  E R  W+        +QEGPE+
Sbjct: 65  ASPRGEPRAPWV--------EQEGPEY 83

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>1C03_GORGO (P30386) Class I histocompatibility antigen, GOGO-C0202 alpha chain|
           precursor
          Length = 366

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGK 216
           GAL L    W    + R FY +   PGR EP     RF S     GYV         S  
Sbjct: 15  GALALT-ETWAGSHSMRYFYTSVSRPGRGEP-----RFIS----VGYVDDTQFVRFDSDA 64

Query: 215 VSP--ERRTGWIGVGEILGLQQEGPEH 141
            SP  E R  W+        +QEGPE+
Sbjct: 65  ASPRGEPRAPWV--------EQEGPEY 83

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>1C02_GORGO (P30385) Class I histocompatibility antigen, GOGO-C0201 alpha chain|
           precursor
          Length = 366

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVP-------SSGK 216
           GAL L    W    + R FY +   PGR EP     RF S     GYV         S  
Sbjct: 15  GALALT-ETWAGSHSMRYFYTSVSRPGRGEP-----RFIS----VGYVDDTQFVRFDSDA 64

Query: 215 VSP--ERRTGWIGVGEILGLQQEGPEH 141
            SP  E R  W+        +QEGPE+
Sbjct: 65  ASPRGEPRAPWV--------EQEGPEY 83

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>1C01_GORGO (P30383) Class I histocompatibility antigen, GOGO-C0101/C0102 alpha|
           chain precursor
          Length = 365

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/78 (26%), Positives = 30/78 (38%)
 Frame = -2

Query: 374 GALFLHFRNWQWPKNPRGFYDASRIPGRAEPISQILRFFSGISTAGYVPSSGKVSPERRT 195
           GAL L    W    + R F+ A   PGR EP    + +        +   +     E R 
Sbjct: 15  GALALT-ETWAGSHSMRYFFTAVAPPGRGEPRFIAVGYVDDTQFVRFDSDAANTRGEPRA 73

Query: 194 GWIGVGEILGLQQEGPEH 141
            W+        +QEGPE+
Sbjct: 74  PWV--------EQEGPEY 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,872,996
Number of Sequences: 219361
Number of extensions: 1408726
Number of successful extensions: 5645
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 4853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5626
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result