ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl21h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 591 e-166
2ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 202 5e-49
3dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 5e-49
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 188 8e-45
5gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 188 8e-45
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 188 8e-45
7emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 186 3e-44
8gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 176 3e-41
9ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 172 5e-40
10gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 149 7e-33
11gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence 149 7e-33
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 135 1e-28
13gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 135 1e-28
14gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 125 1e-25
15gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene,... 117 3e-23
16gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 117 3e-23
17gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (L... 115 1e-22
18gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene... 80 5e-12
19gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of... 44 0.30
20ref|NM_003028.1| Homo sapiens Src homology 2 domain containing a... 42 1.2
21gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-car... 42 1.2
22emb|X75342.1|HSSHB H.sapiens SHB mRNA 42 1.2
23gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
24gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 4.7
25gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 4.7
26gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 4.7
27gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, comp... 40 4.7
28emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 4.7
29gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.7
30gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hos... 40 4.7
31ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG119... 40 4.7
32emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 4.7
33emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in... 40 4.7
34emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in... 40 4.7
35emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 40 4.7
36gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, comple... 40 4.7
37gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 4.7
38dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.7
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.7
40dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
41gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 4.7
42gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.7 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  591 bits (298), Expect = e-166
 Identities = 344/354 (97%), Gaps = 4/354 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   acacagcagcaccacagcgagctaacttagcaagcgtgccacactccccagagatcgagc 61
           |||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 4   acacagca-caccgcagcgagctaacttag-aagcgtgccacactccc-agagatcgagc 60

                                                                       
Query: 62  gaagatgtttggcgtcggcggcatcgtgagcgacctgacggggggcctccggggcgccca 121
            |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 61  -aagatgcttggcgtcggcggcatcgtgagcgacttgacggggggcatccggggcgccca 119

                                                                       
Query: 122 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 179

                                                                       
Query: 182 caccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcag 241
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcag 239

                                                                       
Query: 242 ctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacct 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacct 299

                                                                 
Query: 302 ggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaa 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaa 353
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  202 bits (102), Expect = 5e-49
 Identities = 174/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 116 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 175
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 42  cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 101

                                                                       
Query: 176 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 235
           ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 102 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 161

                                                                       
Query: 236 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 295
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 162 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 221

                             
Query: 296 gaacctggagcagtggct 313
           || |||||||||||||||
Sbjct: 222 gagcctggagcagtggct 239
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
           insert sequence
          Length = 2928

 Score =  202 bits (102), Expect = 5e-49
 Identities = 174/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 116 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 175
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 157 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 216

                                                                       
Query: 176 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 235
           ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 217 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 276

                                                                       
Query: 236 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 295
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 277 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 336

                             
Query: 296 gaacctggagcagtggct 313
           || |||||||||||||||
Sbjct: 337 gagcctggagcagtggct 354
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  188 bits (95), Expect = 8e-45
 Identities = 131/143 (91%)
 Strand = Plus / Plus

                                                                            
Query: 116      cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 175
                ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30023301 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30023360

                                                                            
Query: 176      cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 235
                ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 30023361 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30023420

                                       
Query: 236      catcagctccaccaacgtcgacc 258
                | |||||||| ||  ||||||||
Sbjct: 30023421 cgtcagctcctccctcgtcgacc 30023443



 Score =  135 bits (68), Expect = 1e-28
 Identities = 119/136 (87%)
 Strand = Plus / Plus

                                                                            
Query: 123      ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
                ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 27798757 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27798816

                                                                            
Query: 183      accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
                |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 27798817 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 27798876

                                
Query: 243      tccaccaacgtcgacc 258
                ||||||  ||||||||
Sbjct: 27798877 tccaccgccgtcgacc 27798892



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 276      gggaaggtgggcgcggaggcgaacctggagcagtggct 313
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggct 27799345



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 276      gggaaggtgggcgcggaggcgaacctggagcagtggct 313
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30023539 gggagggtggggacggaggcgagcctggagcagtggct 30023576



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       ggcgtcggcggcatcgtgag 91
                ||||||||||||||||||||
Sbjct: 24817033 ggcgtcggcggcatcgtgag 24817052
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  188 bits (95), Expect = 8e-45
 Identities = 131/143 (91%)
 Strand = Plus / Minus

                                                                         
Query: 116   cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 175
             ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 84450 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 84391

                                                                         
Query: 176   cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 235
             ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 84390 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 84331

                                    
Query: 236   catcagctccaccaacgtcgacc 258
             | |||||||| ||  ||||||||
Sbjct: 84330 cgtcagctcctccctcgtcgacc 84308



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 276   gggaaggtgggcgcggaggcgaacctggagcagtggct 313
             |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 84212 gggagggtggggacggaggcgagcctggagcagtggct 84175
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  188 bits (95), Expect = 8e-45
 Identities = 131/143 (91%)
 Strand = Plus / Plus

                                                                            
Query: 116      cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 175
                ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30114723 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30114782

                                                                            
Query: 176      cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 235
                ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 30114783 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30114842

                                       
Query: 236      catcagctccaccaacgtcgacc 258
                | |||||||| ||  ||||||||
Sbjct: 30114843 cgtcagctcctccctcgtcgacc 30114865



 Score =  135 bits (68), Expect = 1e-28
 Identities = 119/136 (87%)
 Strand = Plus / Plus

                                                                            
Query: 123      ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
                ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 27890081 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27890140

                                                                            
Query: 183      accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
                |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 27890141 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 27890200

                                
Query: 243      tccaccaacgtcgacc 258
                ||||||  ||||||||
Sbjct: 27890201 tccaccgccgtcgacc 27890216



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 276      gggaaggtgggcgcggaggcgaacctggagcagtggct 313
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggct 27890669



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 276      gggaaggtgggcgcggaggcgaacctggagcagtggct 313
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30114961 gggagggtggggacggaggcgagcctggagcagtggct 30114998



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       ggcgtcggcggcatcgtgag 91
                ||||||||||||||||||||
Sbjct: 24908356 ggcgtcggcggcatcgtgag 24908375
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  186 bits (94), Expect = 3e-44
 Identities = 172/198 (86%)
 Strand = Plus / Plus

                                                                       
Query: 116 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 175
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 139 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 198

                                                                       
Query: 176 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 235
           ||||||||||||||| ||  || || ||||| ||||||||||||||||||||||||||||
Sbjct: 199 cggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacctgccagct 258

                                                                       
Query: 236 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 295
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 259 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 318

                             
Query: 296 gaacctggagcagtggct 313
           || |||||||||||||||
Sbjct: 319 gagcctggagcagtggct 336
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  176 bits (89), Expect = 3e-41
 Identities = 164/189 (86%)
 Strand = Plus / Plus

                                                                       
Query: 123 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 123 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 182

                                                                       
Query: 183 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
           ||| |||| |||||| ||  |||| ||||||||   ||||||||||||||||| ||||||
Sbjct: 183 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 242

                                                                       
Query: 243 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 302
           ||||||  |||||||||  ||||||| || |||||||||||||||||||||||| | |||
Sbjct: 243 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 302

                    
Query: 303 gagcagtgg 311
           |||||||||
Sbjct: 303 gagcagtgg 311
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score =  172 bits (87), Expect = 5e-40
 Identities = 165/191 (86%)
 Strand = Plus / Plus

                                                                       
Query: 123 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
           ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 52  ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 111

                                                                       
Query: 183 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
           |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 112 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 171

                                                                       
Query: 243 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 302
           ||||||  ||||||||  ||||||||    || ||||||||||| |||||||||| ||||
Sbjct: 172 tccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagcctg 231

                      
Query: 303 gagcagtggct 313
           |||||||||||
Sbjct: 232 gagcagtggct 242
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score =  149 bits (75), Expect = 7e-33
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                       
Query: 123 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 52  ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 111

                                                                       
Query: 183 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
           |||||| | ||| || ||| |||| ||||||||   || |||||||||||||||||||||
Sbjct: 112 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 171

                                                                       
Query: 243 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 302
           ||||||  |||||||  |||||||||    ||||||  ||| || |||||||||||||||
Sbjct: 172 tccaccctcgtcgacgccaacaacggcaaccgcgggcgggtcggggcggaggcgaacctg 231

                      
Query: 303 gagcagtggct 313
           |||||||||||
Sbjct: 232 gagcagtggct 242
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>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence
          Length = 515

 Score =  149 bits (75), Expect = 7e-33
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                       
Query: 123 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 114 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 173

                                                                       
Query: 183 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
           |||||| | ||| || ||| |||| ||||||||   || |||||||||||||||||||||
Sbjct: 174 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 233

                                                                       
Query: 243 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 302
           ||||||  |||||||  |||||||||    ||||||  ||| || |||||||||||||||
Sbjct: 234 tccaccctcgtcgacgccaacaacggcaaccgcgggcgggtcggggcggaggcgaacctg 293

                      
Query: 303 gagcagtggct 313
           |||||||||||
Sbjct: 294 gagcagtggct 304
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  135 bits (68), Expect = 1e-28
 Identities = 119/136 (87%)
 Strand = Plus / Plus

                                                                         
Query: 123   ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
             ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 42887 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 42946

                                                                         
Query: 183   accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
             |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 42947 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 43006

                             
Query: 243   tccaccaacgtcgacc 258
             ||||||  ||||||||
Sbjct: 43007 tccaccgccgtcgacc 43022



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 276   gggaaggtgggcgcggaggcgaacctggagcagtggct 313
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggct 43475
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  135 bits (68), Expect = 1e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                         
Query: 123   ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
             ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 15136 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 15077

                                                                         
Query: 183   accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
             |||||||| |||||| ||  |||| ||||||||   ||||||||||||||||||||||||
Sbjct: 15076 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 15017

                             
Query: 243   tccaccaacgtcgacc 258
             ||||||  ||||||||
Sbjct: 15016 tccaccgccgtcgacc 15001



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 276   gggaaggtgggcgcggaggcgaacctggagcagtggct 313
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggct 14548
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                       
Query: 203 cgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccacaa 262
           |||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||  ||
Sbjct: 153 cgagttcctcggccgcggcgtcacctgccagcttatcagctccaccgtcgtcgaccctaa 212

                                                              
Query: 263 caacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 313
           ||||||    ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 213 caacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagtggct 263
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>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds
          Length = 1160

 Score =  117 bits (59), Expect = 3e-23
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                       
Query: 147 cgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtcaccgag 206
           ||||||||||| |||||| ||||||||||||||||||||||| | |   ||||| |||||
Sbjct: 1   cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60

                                                  
Query: 207 ctcctcggccgcggcgtcacctgccagctcatcagctcc 245
            ||||||||||||||||||||||||||||| ||||||||
Sbjct: 61  ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score =  117 bits (59), Expect = 3e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                       
Query: 123 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 200 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 259

                                                                       
Query: 183 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
           |||||| | ||| || ||| |||| ||||||||   || |||||||||||||||||||||
Sbjct: 260 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 319

                          
Query: 243 tccaccaacgtcgac 257
           ||||||  |||||||
Sbjct: 320 tccaccctcgtcgac 334



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 288 gcggaggcgaacctggagcagtggct 313
           ||||||||||||||||||||||||||
Sbjct: 945 gcggaggcgaacctggagcagtggct 970
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>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter
            region and partial cds
          Length = 5236

 Score =  115 bits (58), Expect = 1e-22
 Identities = 109/126 (86%)
 Strand = Plus / Plus

                                                                        
Query: 123  ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 182
            ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 3566 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 3625

                                                                        
Query: 183  accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagc 242
            ||| |||| |||||| ||  |||| ||||||||   ||||||||||||||||| ||||||
Sbjct: 3626 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 3685

                  
Query: 243  tccacc 248
            ||||||
Sbjct: 3686 tccacc 3691



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 262  acaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 311
            ||||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 4255 acaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 4304
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>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region
            and partial cds
          Length = 3196

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                        
Query: 187  tcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagctcca 246
            ||||||||||| ||  |||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446

                        
Query: 247  ccaacgtcgacc 258
            ||  ||||||||
Sbjct: 2447 ccgtcgtcgacc 2458



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 273  cgcgggaaggtgggcgcggaggcgaacctggagcagtggctcctgc 318
            ||||||||||||||   |||||||| ||||||||||||||| ||||
Sbjct: 2744 cgcgggaaggtgggtcaggaggcgagcctggagcagtggctgctgc 2789
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>gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of the complete genome
          Length = 8803

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 155  cgcgctcgacttcaacgacttcggcg 180
            ||||| ||||||||||||||||||||
Sbjct: 4469 cgcgcacgacttcaacgacttcggcg 4494
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>ref|NM_003028.1| Homo sapiens Src homology 2 domain containing adaptor protein B
           (SHB), mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 100 cggggggcctccggggcgccc 120
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449
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>gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-carbonic anhydrase
           mRNA, partial cds
          Length = 775

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 176 cggcgccaccgtcatggacggcgtcaccg 204
           ||||||||| ||||||||||||| |||||
Sbjct: 400 cggcgccacggtcatggacggcgccaccg 428
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>emb|X75342.1|HSSHB H.sapiens SHB mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 100 cggggggcctccggggcgccc 120
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449
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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    ggcgtcggcggcatcgtgag 91
             ||||||||||||||||||||
Sbjct: 52268 ggcgtcggcggcatcgtgag 52287
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    gctcctgccgacgaacctgc 330
              ||||||||||||||||||||
Sbjct: 137505 gctcctgccgacgaacctgc 137486
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 325    acctgccgttcatcaccaccggcg 348
              ||||||||||||||| ||||||||
Sbjct: 288875 acctgccgttcatcatcaccggcg 288852
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 325    acctgccgttcatcaccaccggcg 348
              ||||||||||||||| ||||||||
Sbjct: 153202 acctgccgttcatcatcaccggcg 153225
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>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     cggcggcatcgtgagcgacctgac 100
              ||||||||||| ||||||||||||
Sbjct: 205636 cggcggcatcgagagcgacctgac 205659
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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    cggcggcatcgtgagcgacctgac 100
             ||||||||||| ||||||||||||
Sbjct: 80122 cggcggcatcgagagcgacctgac 80099
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     agctcctcggccgcggcgtc 224
               ||||||||||||||||||||
Sbjct: 1962239 agctcctcggccgcggcgtc 1962220
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>gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 228052

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   agctcatcagctccaccaac 251
             ||||||||||||||||||||
Sbjct: 82121 agctcatcagctccaccaac 82102
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>ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG11980-PC, isoform C
           (LOC661050), mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 caccaacgtcgaccacaaca 264
           ||||||||||||||||||||
Sbjct: 239 caccaacgtcgaccacaaca 220
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     gccgttcatcaccaccggcg 348
               ||||||||||||||||||||
Sbjct: 1867059 gccgttcatcaccaccggcg 1867040
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>emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in linkage group 21,
             complete sequence
          Length = 168569

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aacacagcagcaccacagcg 20
             ||||||||||||||||||||
Sbjct: 55971 aacacagcagcaccacagcg 55952
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>emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in linkage group 21,
             complete sequence
          Length = 179432

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aacacagcagcaccacagcg 20
             ||||||||||||||||||||
Sbjct: 95886 aacacagcagcaccacagcg 95867
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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     ggcgtcggcggcatcgtgag 91
              ||||||||||||||||||||
Sbjct: 103984 ggcgtcggcggcatcgtgag 104003
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>gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, complete sequence
          Length = 147727

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   acctggagcagtggctcctg 317
             ||||||||||||||||||||
Sbjct: 78731 acctggagcagtggctcctg 78750
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 175     tcggcgccaccgtcatggacggcg 198
               ||||||||| ||||||||||||||
Sbjct: 2990742 tcggcgccatcgtcatggacggcg 2990719
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 72      ggcgtcggcggcatcgtgagcgac 95
               |||||||||||||||||| |||||
Sbjct: 5079435 ggcgtcggcggcatcgtgcgcgac 5079412
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     ggcgtcggcggcatcgtgagcgac 95
              |||||||||||||||||| |||||
Sbjct: 590306 ggcgtcggcggcatcgtgcgcgac 590329



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    tgcgcaagaacgcgctcgacttca 168
              ||||||||||| ||||||||||||
Sbjct: 206796 tgcgcaagaacccgctcgacttca 206773
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>dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B01, full
           insert sequence
          Length = 1556

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  ggcgtcggcggcatcgtgag 91
           ||||||||||||||||||||
Sbjct: 613 ggcgtcggcggcatcgtgag 594
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 191     ggacggcgtcaccgagctcctcggccgcggcg 222
               ||||||||| | |||| |||||||||||||||
Sbjct: 1448865 ggacggcgtgatcgagttcctcggccgcggcg 1448834
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     ggcgtcggcggcatcgtgagcgac 95
              |||||||||||||||||| |||||
Sbjct: 657733 ggcgtcggcggcatcgtgcgcgac 657756


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,039,357
Number of Sequences: 3902068
Number of extensions: 2039357
Number of successful extensions: 45022
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44008
Number of HSP's gapped (non-prelim): 1006
length of query: 355
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 333
effective length of database: 17,147,199,772
effective search space: 5710017524076
effective search space used: 5710017524076
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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