Clone Name | bastl21h01 |
---|---|
Clone Library Name | barley_pub |
>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex| component Sec8) Length = 1053 Score = 57.0 bits (136), Expect = 1e-08 Identities = 24/32 (75%), Positives = 29/32 (90%) Frame = +2 Query: 86 GIFDGLPIPPDKSYLKEGLSRIDEGWAAARFD 181 GIF+GLP+P DK+YL+E L+RIDE WAAARFD Sbjct: 2 GIFNGLPVPSDKTYLREELARIDESWAAARFD 33
>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 33.5 bits (75), Expect = 0.16 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +1 Query: 7 YSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 171 YS S + AP P P PA+ RPP +P RA AD RR G+G Sbjct: 891 YSCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947
>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 33.5 bits (75), Expect = 0.16 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +1 Query: 7 YSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 171 YS S + AP P P PA+ RPP +P RA AD RR G+G Sbjct: 891 YSCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947
>VGLC_BHV1C (P14378) Glycoprotein GIII precursor| Length = 521 Score = 32.3 bits (72), Expect = 0.36 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 10/69 (14%) Frame = +1 Query: 4 PYSPVSPDLAP---LPGSRLAVGNDEP-------PPAWHLRRPPNSARQILPEGRAVADR 153 P +P SPD P PG+ VG EP PP + PP P G A R Sbjct: 55 PPTPNSPDATPEDSTPGATTPVGTPEPPSVSEHDPPVTNSTPPPAPPEDGRPGGAGNASR 114 Query: 154 RGMGSGAVR 180 G SG R Sbjct: 115 DGRPSGGGR 123
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 32.0 bits (71), Expect = 0.47 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +1 Query: 13 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 129 P +P AP P S L VG PP+ +R PP A ++LP Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2035
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 32.0 bits (71), Expect = 0.47 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +1 Query: 13 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 129 P +P AP P S L VG PP+ +R PP A ++LP Sbjct: 2000 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2038
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 30.8 bits (68), Expect = 1.0 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 Query: 13 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 129 P +P AP P S L VG PP +R PP A ++LP Sbjct: 2001 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2039
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 30.8 bits (68), Expect = 1.0 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 Query: 13 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 129 P +P AP P S L VG PP +R PP A ++LP Sbjct: 1998 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2036
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 28.9 bits (63), Expect = 3.9 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = -3 Query: 104 GGRRRCHAGGGSSLPTARRDPGRGARSGETGLYG 3 GG GGG S RR+ G G GE G YG Sbjct: 135 GGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYG 168
>TBC17_HUMAN (Q9HA65) TBC1 domain family member 17| Length = 648 Score = 28.9 bits (63), Expect = 3.9 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +1 Query: 4 PYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPE 132 P+SP SP +PLP S PPP+ P+S+ +ILPE Sbjct: 600 PHSP-SPTASPLPLSPTRAP-PTPPPSTDTAPQPDSSLEILPE 640
>ERF_HUMAN (P50548) ETS domain-containing transcription factor ERF (Ets2| repressor factor) Length = 548 Score = 28.5 bits (62), Expect = 5.2 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 4 PYSPVSPDLAPLPGSRLAVGNDEPPP-AWHLRRPPNSARQILPEGRAV--ADRRGMGSGA 174 P P++P+ P+P S + + P + L+ PP RQ +AV AD+ G +G Sbjct: 349 PLPPMAPETPPVPSSASSSSSSSSSPFKFKLQPPPLGRRQRAAGEKAVAGADKSGGSAGG 408 Query: 175 V 177 + Sbjct: 409 L 409
>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Activated in prostate cancer protein) Length = 2839 Score = 28.5 bits (62), Expect = 5.2 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -3 Query: 158 PRRSATALPSGKICLAELGGRRRCHAGGG-----SSLPTARRDPGRGAR 27 PRRS P+G + E GG R C G G + P++ D G A+ Sbjct: 2518 PRRSPGP-PAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQ 2565
>DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 662 Score = 28.5 bits (62), Expect = 5.2 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -1 Query: 157 LVDPRQPFLQV-RFVWRNWEAVEDATPVAVHRYRRRGGTRGEAR 29 ++ PR F + RFV R+WE +ED++ +AV Y R RG+ R Sbjct: 59 VLSPRNTFSNLKRFVGRDWEELEDSS-LAV-PYTVRANDRGQVR 100
>B3AT_RAT (P23562) Band 3 anion transport protein (Anion exchange protein 1)| (AE 1) (Solute carrier family 4 member 1) (CD233 antigen) Length = 927 Score = 28.1 bits (61), Expect = 6.7 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 4 PYSPVSPDL-APLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRA 141 P P P L L ++ G++EP P+ L+ PPNS ++ GRA Sbjct: 201 PLLPHQPSLETKLYCAQAEGGSEEPSPSGILKIPPNSETTLVLVGRA 247
>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein| Length = 653 Score = 27.7 bits (60), Expect = 8.8 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 13 PVSPDLAPL-PGSRLAVGNDEPPPAWHLRRPPNSARQILPEGR 138 P P PL PG + A+ PP W+LR P SAR + GR Sbjct: 430 PGEPFRFPLSPGPQPAL---MPPNLWNLRAKPGSARLVAGAGR 469
>SH22A_HUMAN (Q9NP31) SH2 domain protein 2A (T cell-specific adapter protein)| (TSAd) (VEGF receptor-associated protein) (SH2 domain-containing adapter protein) Length = 389 Score = 27.7 bits (60), Expect = 8.8 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 70 EPPPAWHLRRPPNSARQILPE 132 +PPPAW P N +RQ+L + Sbjct: 357 QPPPAWRHTLPHNLSRQVLQD 377 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.137 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,008,401 Number of Sequences: 219361 Number of extensions: 684573 Number of successful extensions: 2191 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2186 length of database: 80,573,946 effective HSP length: 35 effective length of database: 72,896,311 effective search space used: 1749511464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)