>SF3B3_HUMAN (Q15393) Splicing factor 3B subunit 3 (Spliceosome-associated|
          protein 130) (SAP 130) (SF3b130) (Pre-mRNA splicing
          factor SF3b 130 kDa subunit) (STAF130)
          Length = 1217

 Score = 35.4 bits (80), Expect = 0.045
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +1

Query: 10 MYLYSLTLQRATGAVCAVIGSFSG 81
          M+LY+LTLQRATG   A+ G+FSG
Sbjct: 1  MFLYNLTLQRATGISFAIHGNFSG 24

>RSE1_CANGA (Q6FLQ6) Pre-mRNA-splicing factor RSE1|
          Length = 1296

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +1

Query: 10 MYLYSLTLQRATGAVCAVIGSFSGRDSKK 96
          M LY LTLQR +  V +V GSF GRDS +
Sbjct: 1  MELYHLTLQRQSNYVHSVKGSFLGRDSNE 29

>RSE1_NEUCR (Q7RYR4) Pre-mRNA-splicing factor rse-1|
          Length = 1271

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 10 MYLYSLTLQRATGAVCAVIGSFSG 81
          M+LYSLT+Q  T    A++G FSG
Sbjct: 7  MFLYSLTIQPPTAVTQALLGQFSG 30

>RSE1_USTMA (Q4PGM6) Pre-mRNA-splicing factor RSE1|
          Length = 1221

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 10 MYLYSLTLQRATGAVCAVIGSFSG 81
          MYLY+LTLQ +      V+G FSG
Sbjct: 4  MYLYNLTLQASGSVNATVVGQFSG 27

>RSE1_CRYNE (Q5KP25) Pre-mRNA-splicing factor RSE1|
          Length = 1217

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +1

Query: 10 MYLYSLTLQRATGAVCAVIGSFSGRDSKK 96
          M+L +LTL   T    AV+GSFSG  S++
Sbjct: 1  MHLLNLTLSSPTNVSTAVVGSFSGSKSQE 29

>RSE1_EMENI (Q5B1X8) Pre-mRNA-splicing factor rse1|
          Length = 1226

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 10 MYLYSLTLQRATGAVCAVIGSFSG 81
          M++YSLT+Q  T    A++G F+G
Sbjct: 7  MFMYSLTIQPPTAITQAILGQFAG 30

>RSE1_ASPFU (Q4WLI5) Pre-mRNA-splicing factor rse1|
          Length = 1225

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 10 MYLYSLTLQRATGAVCAVIGSFSG 81
          M++YSLT+Q  T    A++G F+G
Sbjct: 7  MFMYSLTIQPPTAITQAILGQFAG 30

>RSE1_CANAL (Q5A7S5) Pre-mRNA-splicing factor RSE1|
          Length = 1219

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +1

Query: 7   AMYLYSLTLQRATGAVCAVIGSFSGRDSKKSNA 105
           ++YLY+LTL+  +  + +++G F  +D+   NA
Sbjct: 39  SVYLYNLTLKPPSYYISSIVGQFYKQDNSTKNA 71

>RSE1_MAGGR (Q52E49) Pre-mRNA-splicing factor RSE1|
          Length = 1229

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 10  MYLYSLTLQRATGAVCAVIGSFSGRDSKKSNAA 108
           M+LYSL++Q  +    A++G FSG   ++  AA
Sbjct: 7   MFLYSLSIQPPSTITRAILGQFSGTKEQQIVAA 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,813,469
Number of Sequences: 219361
Number of extensions: 62948
Number of successful extensions: 204
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 80,573,946
effective HSP length: 12
effective length of database: 77,941,614
effective search space used: 1870598736
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)