>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  161 bits (81), Expect = 5e-37
 Identities = 90/93 (96%)
 Strand = Plus / Plus

                                                                           
Query: 7       gccatgtacctctacagcctgacgctgcagagggcgacgggcgccgtgtgcgccgtcatc 66
               |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 1978562 gccatgtacctctacagcctgacgctgcagcgggcgacgggcgcggtgtgcgccgtcatc 1978621

                                                
Query: 67      ggcagcttcagcggccgcgactcgaagaagtcg 99
               |||||||||||||| ||||||||||||||||||
Sbjct: 1978622 ggcagcttcagcgggcgcgactcgaagaagtcg 1978654

>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0026E05
          Length = 159860

 Score =  161 bits (81), Expect = 5e-37
 Identities = 90/93 (96%)
 Strand = Plus / Plus

                                                                         
Query: 7     gccatgtacctctacagcctgacgctgcagagggcgacgggcgccgtgtgcgccgtcatc 66
             |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 28770 gccatgtacctctacagcctgacgctgcagcgggcgacgggcgcggtgtgcgccgtcatc 28829

                                              
Query: 67    ggcagcttcagcggccgcgactcgaagaagtcg 99
             |||||||||||||| ||||||||||||||||||
Sbjct: 28830 ggcagcttcagcgggcgcgactcgaagaagtcg 28862

>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0081C13
          Length = 144624

 Score =  161 bits (81), Expect = 5e-37
 Identities = 90/93 (96%)
 Strand = Plus / Plus

                                                                          
Query: 7      gccatgtacctctacagcctgacgctgcagagggcgacgggcgccgtgtgcgccgtcatc 66
              |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 118123 gccatgtacctctacagcctgacgctgcagcgggcgacgggcgcggtgtgcgccgtcatc 118182

                                               
Query: 67     ggcagcttcagcggccgcgactcgaagaagtcg 99
              |||||||||||||| ||||||||||||||||||
Sbjct: 118183 ggcagcttcagcgggcgcgactcgaagaagtcg 118215

>ref|XM_464062.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3705

 Score =  155 bits (78), Expect = 3e-35
 Identities = 87/90 (96%)
 Strand = Plus / Plus

                                                                      
Query: 10 atgtacctctacagcctgacgctgcagagggcgacgggcgccgtgtgcgccgtcatcggc 69
          ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 1  atgtacctctacagcctgacgctgcagcgggcgacgggcgcggtgtgcgccgtcatcggc 60

                                        
Query: 70 agcttcagcggccgcgactcgaagaagtcg 99
          ||||||||||| ||||||||||||||||||
Sbjct: 61 agcttcagcgggcgcgactcgaagaagtcg 90

>ref|XM_751791.1| Ustilago maydis 521 hypothetical protein (UM00737.1) partial mRNA
          Length = 3666

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 9  catgtacctctacagcctgacgctgcag 36
          |||||||||||||| |||||||||||||
Sbjct: 9  catgtacctctacaacctgacgctgcag 36

>ref|XM_469430.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1584

 Score = 44.1 bits (22), Expect = 0.081
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 18  ctacagcctgacgctgcagagg 39
           ||||||||||||||||||||||
Sbjct: 668 ctacagcctgacgctgcagagg 689

>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score = 44.1 bits (22), Expect = 0.081
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 18    ctacagcctgacgctgcagagg 39
             ||||||||||||||||||||||
Sbjct: 61172 ctacagcctgacgctgcagagg 61193

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.081
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 18       ctacagcctgacgctgcagagg 39
                ||||||||||||||||||||||
Sbjct: 27925444 ctacagcctgacgctgcagagg 27925465

>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score = 44.1 bits (22), Expect = 0.081
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    ctacagcctgacgctgcagagg 39
             ||||||||||||||||||||||
Sbjct: 99582 ctacagcctgacgctgcagagg 99561

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.081
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 18       ctacagcctgacgctgcagagg 39
                ||||||||||||||||||||||
Sbjct: 28016768 ctacagcctgacgctgcagagg 28016789

>dbj|AK108055.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-H10, full
           insert sequence
          Length = 1706

 Score = 44.1 bits (22), Expect = 0.081
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 18  ctacagcctgacgctgcagagg 39
           ||||||||||||||||||||||
Sbjct: 767 ctacagcctgacgctgcagagg 746

>dbj|AK064270.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E07, full
           insert sequence
          Length = 1586

 Score = 44.1 bits (22), Expect = 0.081
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 18  ctacagcctgacgctgcagagg 39
           ||||||||||||||||||||||
Sbjct: 670 ctacagcctgacgctgcagagg 691

>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    cgccgtgtgcgccgtcatcg 67
             ||||||||||||||||||||
Sbjct: 76674 cgccgtgtgcgccgtcatcg 76655

>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gcagagggcgacgggcgccg 52
             ||||||||||||||||||||
Sbjct: 96590 gcagagggcgacgggcgccg 96609

>gb|AF298586.1|AF298586 Pseudorabies virus Ea early protein EPO gene, complete cds
          Length = 1233

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   gcagagggcgacgggcgccg 52
            ||||||||||||||||||||
Sbjct: 1124 gcagagggcgacgggcgccg 1105

>gb|U27486.1|SHU27486 Suid herpesvirus 1 early protein 0 EP0 mRNA, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  gcagagggcgacgggcgccg 52
           ||||||||||||||||||||
Sbjct: 131 gcagagggcgacgggcgccg 112

>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds
          Length = 8438

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 33  gcagagggcgacgggcgccg 52
           ||||||||||||||||||||
Sbjct: 512 gcagagggcgacgggcgccg 531

>gb|M57504.1|SH1EPO Pseudorabies virus EPO mRNA, complete cds
          Length = 1845

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   gcagagggcgacgggcgccg 52
            ||||||||||||||||||||
Sbjct: 1334 gcagagggcgacgggcgccg 1315

>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 80      gccgcgactcgaagaagtcgaac 102
               ||||||| |||||||||||||||
Sbjct: 1875813 gccgcgaatcgaagaagtcgaac 1875835

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    cagcttcagcggccgcgac 87
             |||||||||||||||||||
Sbjct: 79877 cagcttcagcggccgcgac 79895


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 494,723
Number of Sequences: 3902068
Number of extensions: 494723
Number of successful extensions: 34790
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34550
Number of HSP's gapped (non-prelim): 240
length of query: 110
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 89
effective length of database: 17,151,101,840
effective search space: 1526448063760
effective search space used: 1526448063760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)