ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl21d09 |
|---|---|
| Clone Library Name | barley_pub |
>NEB2_MOUSE (Q6R891) Neurabin-2 (Neurabin-II) (Spinophilin) (Protein| phosphatase 1 regulatory subunit 9B) Length = 817 Score = 33.9 bits (76), Expect = 0.098 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 36 PPPPSPLGLQRGAERERKTGGDPPPRVAVIPA 131 PPPP+P G E+ER GG PP+ V PA Sbjct: 255 PPPPAPSG-DGATEKERGPGGQQPPQHRVAPA 285
>NEB2_RAT (O35274) Neurabin-2 (Neurabin-II) (Spinophilin) (Protein| phosphatase 1 regulatory subunit 9B) (Neural tissue-specific F-actin-binding protein II) (p130) (PP1bp134) Length = 817 Score = 33.1 bits (74), Expect = 0.17 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +3 Query: 36 PPPPSPLGLQRGAERERKTGGDPPPRVAVIPA 131 PPPP+P G E++R GG PP+ V PA Sbjct: 255 PPPPAPSG-DAATEKDRGPGGQQPPQHRVAPA 285
>SMC4_HUMAN (Q9NTJ3) Structural maintenance of chromosomes 4-like 1 protein| (Chromosome-associated polypeptide C) (hCAP-C) (XCAP-C homolog) Length = 1288 Score = 32.3 bits (72), Expect = 0.28 Identities = 18/39 (46%), Positives = 20/39 (51%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPRVA 119 PST+ RE PPPPSP G AE E +G P A Sbjct: 8 PSTAR-RREEGPPPPSPDGASSDAEPEPPSGRTESPATA 45
>NEB2_HUMAN (Q96SB3) Neurabin-2 (Neurabin-II) (Spinophilin) (Protein| phosphatase 1 regulatory subunit 9B) Length = 815 Score = 32.3 bits (72), Expect = 0.28 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 36 PPPPSPLGLQRGAERERKTGGDPPPRVAVIPA 131 PPPP+P G AE+ER G PP+ V PA Sbjct: 254 PPPPAPSG-DAPAEKERCPAGQQPPQHRVAPA 284
>ENA_DROME (Q8T4F7) Protein enabled| Length = 834 Score = 31.6 bits (70), Expect = 0.49 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPRVAVIPAI 134 P + PPPP+P + GA GG PPP PA+ Sbjct: 562 PPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 605
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 31.2 bits (69), Expect = 0.63 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPRVAVIPA 131 PS R ASPPPP + +R+ PPP+ PA Sbjct: 599 PSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPA 641 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPR 113 PS R SP PP P +R R+ PPPR Sbjct: 544 PSPPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPR 580
>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 646 Score = 30.8 bits (68), Expect = 0.83 Identities = 29/118 (24%), Positives = 35/118 (29%), Gaps = 6/118 (5%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPRVAVIPAIYXXXXXXXXXXXXXXX 182 P +S + PPP P + PPP +A +P + Sbjct: 500 PVSSTKVNKFPPPPKFPQSSFPPPPMDDLPPPPPPPEIADLPPDFL-------------- 545 Query: 183 XXXXXXXXXXSPPQPARFTVRAASSLPP------GCFPPCLR*PAARRLLDGAPPPSP 338 PP P F SLPP PP P A GAPPP P Sbjct: 546 -----------PPPPPSFVSHGGESLPPPPPDPVASLPPP---PPAFTSAGGAPPPPP 589
>GALR3_HUMAN (O60755) Galanin receptor type 3 (GAL3-R) (GALR3)| Length = 368 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/41 (46%), Positives = 20/41 (48%) Frame = +3 Query: 240 VRAASSLPPGCFPPCLR*PAARRLLDGAPPPSPYVGVVEVG 362 VR ASS PPGC P P+ R L G P P G V G Sbjct: 323 VRPASSGPPGC--PGDARPSGRLLAGGGQGPEPREGPVHGG 361
>NED4L_MOUSE (Q8CFI0) E3 ubiquitin-protein ligase NEDD4-like protein (EC| 6.3.2.-) (Nedd4-2) (NEDD4.2) Length = 1004 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 330 EAAHRQAGGAQQVSEGTEENTQEGGRKQPVP 238 EAAHR+ + +SE E EGG + P P Sbjct: 271 EAAHRRFRSRRHISEDLEPEASEGGGEGPEP 301
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = +3 Query: 216 PPQPARFTVRAASSLPPGCFPPCLR*PAARRLLDGAPPPSP 338 PP P+RF +PP PP P R G PPP P Sbjct: 319 PPPPSRFGPPGMGGMPP---PP----PPGMRYPGGMPPPPP 352
>DYR1B_MOUSE (Q9Z188) Dual specificity tyrosine-phosphorylation-regulated kinase| 1B (EC 2.7.12.1) Length = 589 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = +3 Query: 27 EASPPPPSPLGLQRGAE--RERKTGGDPP 107 + SPPPP+P A R R TGG PP Sbjct: 534 DCSPPPPAPAPQHPAASALRTRMTGGRPP 562
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 219 PQPARFTVRAASSLPPGCFPPCLR*PAARRLLDGAPPPSP 338 P P+RF + AS++PP P L PAA + PP P Sbjct: 2254 PAPSRFPI--ASTIPPAEGPVYLGKPAAAKASGAGGPPRP 2291
>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) (Verprolin homology domain-containing protein 2) Length = 498 Score = 28.9 bits (63), Expect = 3.2 Identities = 30/112 (26%), Positives = 33/112 (29%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPRVAVIPAIYXXXXXXXXXXXXXXX 182 P S+ + PPP PLG G K G PPP P Sbjct: 289 PKRSSVVSPSHPPPAPPLGSPPGP----KPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSP 344 Query: 183 XXXXXXXXXXSPPQPARFTVRAASSLPPGCFPPCLR*PAARRLLDGAPPPSP 338 PP P F PP P L P + GAPPP P Sbjct: 345 GTPPPPSPPSFPPHPD-FAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPP 395
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 Query: 6 STSNDTREASPPPPSPLGLQRGAERERKTGG 98 ++S+ + PPPP P G +RG R GG Sbjct: 570 NSSSSSSAPLPPPPPPSGGRRGRARNNTRGG 600
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Frame = +3 Query: 39 PPPSPLGLQRGAERERK-----TGGDPPPRVAVIPA 131 PPPSP RG + +R +GG P P A PA Sbjct: 68 PPPSPAPEPRGGKAKRSPSAAGSGGPPTPAAAAQPA 103
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Frame = +3 Query: 39 PPPSPLGLQRGAERERK-----TGGDPPPRVAVIPA 131 PPPSP RG + +R +GG P P A PA Sbjct: 68 PPPSPAPEPRGGKAKRSPSAAGSGGPPTPAAAAQPA 103
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Frame = +3 Query: 39 PPPSPLGLQRGAERERK-----TGGDPPPRVAVIPA 131 PPPSP RG + +R +GG P P A PA Sbjct: 68 PPPSPTPEPRGGKAKRSPSAAGSGGPPTPAAAAQPA 103
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +3 Query: 36 PPPPSPLGLQRGAERERKTGGDPPPR 113 PP P P G G+ R R+ GG PP R Sbjct: 293 PPQPPPAG---GSARRRRRGGGPPGR 315
>CEBPB_HUMAN (P17676) CCAAT/enhancer-binding protein beta (C/EBP beta) (Nuclear| factor NF-IL6) (Transcription factor 5) Length = 345 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERE 83 P+T+ DT EA+PP P+P G + Sbjct: 90 PATATDTFEAAPPAPAPAPASSGQHHD 116
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 7/46 (15%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAE-------RERKTGGDPPPRVA 119 PS+ + +E PPPP Q+ A+ RE T G PP+ A Sbjct: 855 PSSQSSKKEMLPPPPVSSSSQKPAKPALKRSRREADTCGQDPPKSA 900
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPR 113 PS R ASPPPP +R+ PPP+ Sbjct: 625 PSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPK 661
>VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)| Length = 383 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +3 Query: 36 PPPPSPLGLQRGAERERKTGGDPPP 110 PPPP + L G+ GG PPP Sbjct: 184 PPPPPGVSLSGGSAAGHGAGGGPPP 208
>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)| Length = 1090 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = +3 Query: 213 SPPQPARFTVRAASSLPPGCFPPCLR*PAARRLLD-GAPPPS 335 +PP P F A PP PP R PA ++ APPPS Sbjct: 195 NPPLPPTFQPGAPPGPPPAGGPPPSRGPAPQKTPPRAAPPPS 236
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPR 113 PS R ASPPPP +R+ PPP+ Sbjct: 620 PSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPK 656
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPR 113 PS R ASPPPP +R+ PPP+ Sbjct: 606 PSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPK 642
>CI047_HUMAN (Q6ZRZ4) Protein C9orf47 precursor| Length = 202 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = +3 Query: 3 PSTSNDTREAS---PPPPSPLGLQRGAERERKTGGDPPPRVAVIPA 131 P ND A PP PS + Q A R R+ PP R+ V PA Sbjct: 110 PRPGNDVASAETAGPPSPSGIRAQDRAPRHRRA---PPARMPVAPA 152
>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific| (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein) Length = 1739 Score = 28.1 bits (61), Expect = 5.4 Identities = 25/91 (27%), Positives = 29/91 (31%), Gaps = 6/91 (6%) Frame = +3 Query: 12 SNDTREASPPPPSPLGLQRGAERERKTGG------DPPPRVAVIPAIYXXXXXXXXXXXX 173 S +TR PPPP P L A R G PPP A+ P Sbjct: 1587 SVETRPPPPPPPPPPPLPPPAHLGRSPAGPPVLHAPPPPNAALPPP---------PTLLA 1637 Query: 174 XXXXXXXXXXXXXSPPQPARFTVRAASSLPP 266 PP A +A+SLPP Sbjct: 1638 SNPEPALLQSLASLPPNQAFLPPTSAASLPP 1668
>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4| (WASP-family protein member 4) Length = 625 Score = 27.7 bits (60), Expect = 7.0 Identities = 29/112 (25%), Positives = 33/112 (29%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPRVAVIPAIYXXXXXXXXXXXXXXX 182 P S+ + PPP PLG + K G PPP P Sbjct: 417 PKRSSVVSPSHPPPAPPLG----SPPSSKPGFAPPPAPPPPPPPMIGIPPPPPPIGFGSP 472 Query: 183 XXXXXXXXXXSPPQPARFTVRAASSLPPGCFPPCLR*PAARRLLDGAPPPSP 338 PP P F PP P L P + GAPPP P Sbjct: 473 GTPPPPSSPSFPPHPD-FAAPPPLPPPPAADYPTLPPPPLSQPTRGAPPPPP 523
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = +3 Query: 219 PQPARFTVRAASSLPPGCFPPCLR*PAARRLLDGAPPPSPYVG 347 PQPA +R +LPP P+ LL PPPSP VG Sbjct: 290 PQPASDALRPRPALPP---------PSKSALL---PPPSPRVG 320
>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:| Proline-rich peptide SP-A (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)] Length = 676 Score = 27.7 bits (60), Expect = 7.0 Identities = 27/103 (26%), Positives = 27/103 (26%) Frame = +3 Query: 30 ASPPPPSPLGLQRGAERERKTGGDPPPRVAVIPAIYXXXXXXXXXXXXXXXXXXXXXXXX 209 A PPPP P R G PPP Sbjct: 445 AGPPPPGPPSPGPAPPGARPPPGPPPP--------------------------------G 472 Query: 210 XSPPQPARFTVRAASSLPPGCFPPCLR*PAARRLLDGAPPPSP 338 PP PA R PP PP P R G PPP P Sbjct: 473 PPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGP 515
>ATF6B_HUMAN (Q99941) Cyclic AMP-dependent transcription factor ATF-6 beta| (Activating transcription factor 6 beta) (ATF6-beta) (cAMP-responsive element-binding protein-like 1) (cAMP response element-binding protein-related protein) (Creb-rp) (Protein G13 Length = 703 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Frame = +3 Query: 36 PPPPSPLGLQRGAERERKTGGDP----PPRVAVIPA 131 PPP SP+ L +GA R + G P P R +++PA Sbjct: 275 PPPVSPVVLIQGAIRVQPEGPAPSLPRPERKSIVPA 310
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = +3 Query: 219 PQPARFTVRAASSLPPGCFPPCLR*PAARRLLDGAPPPSPYVG 347 PQPA +R +LPP P+ LL PPPSP VG Sbjct: 290 PQPASDALRPRPALPP---------PSKSALL---PPPSPRVG 320
>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = +3 Query: 246 AASSLPPGCFPPCLR*PAARRLLD--GAPPPSP 338 AA+S PPG PP R ++R D G PPP+P Sbjct: 717 AAASPPPGDPPPPRRARRSQRHSDARGTPPPAP 749
>POLN_RUBVM (Q86500) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = +3 Query: 246 AASSLPPGCFPPCLR*PAARRLLD--GAPPPSP 338 AA+S PPG PP R ++R D G PPP+P Sbjct: 718 AATSPPPGDPPPPRRARRSQRHSDARGTPPPAP 750
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 27.7 bits (60), Expect = 7.0 Identities = 27/115 (23%), Positives = 35/115 (30%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPRVAVIPAIYXXXXXXXXXXXXXXX 182 P+ S + PPPP P+G + RE PPP P + Sbjct: 246 PTPSRALDDKPPPPPPPVGNRPSMHRE---AVPPPPSQTSKPPV---------------P 287 Query: 183 XXXXXXXXXXSPPQPARFTVRAASSLPPGCFPPCLR*PAARRLLDGAPPPSPYVG 347 +PP P + LPP R P L + PP P G Sbjct: 288 STPRPGLGSQAPPPPPPPSRPGPPPLPPASNDEIPRLPQRNLSLTSSAPPLPSPG 342
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/42 (33%), Positives = 16/42 (38%) Frame = +3 Query: 3 PSTSNDTREASPPPPSPLGLQRGAERERKTGGDPPPRVAVIP 128 P D +A P P+P G QR R R PP P Sbjct: 63 PGQPADNAQAGAPAPAPNGQQRPPRRRRMIPTRAPPPAGAPP 104
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +3 Query: 36 PPPPSPLGLQRGAERERKTGGDPPP 110 PPPP Q+G + GG PPP Sbjct: 1292 PPPPQQQQGQQGQQPPPSVGGGPPP 1316
>ACOT4_HUMAN (Q8N9L9) Acyl-coenzyme A thioesterase 4 (EC 3.1.2.2) (Acyl-CoA| thioesterase 4) (Peroxisomal acyl coenzyme A thioester hydrolase Ib) (Peroxisomal long-chain acyl-coA thioesterase Ib) (PTE-Ib) (PTE-2b) Length = 421 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +3 Query: 219 PQPARFTVRAASS---LPPGCFPPCLR*PAARRLLDGAPPPSPYVGVVEV 359 P+P R +A LPPG +R R L P P P+ G++++ Sbjct: 114 PEPGRLLCQAQHERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDI 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,590,587 Number of Sequences: 219361 Number of extensions: 806586 Number of successful extensions: 4119 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3395 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4043 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
