>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0023F01, complete sequence
          Length = 145009

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 2     cgccgccgcaccacggggcacctcccctccaa 33
             ||||||||||||||||| ||||||||||||||
Sbjct: 76286 cgccgccgcaccacgggccacctcccctccaa 76317

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 2        cgccgccgcaccacggggcacctcccctccaa 33
                ||||||||||||||||| ||||||||||||||
Sbjct: 26513434 cgccgccgcaccacgggccacctcccctccaa 26513403

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 2        cgccgccgcaccacggggcacctcccctccaa 33
                ||||||||||||||||| ||||||||||||||
Sbjct: 26838698 cgccgccgcaccacgggccacctcccctccaa 26838667

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 11     accacggggcacctcccctccaagcgccg 39
              ||||||||| |||||| ||||||||||||
Sbjct: 621525 accacggggaacctccgctccaagcgccg 621553

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      gcggcccaggctcccgagga 81
               ||||||||||||||||||||
Sbjct: 4290670 gcggcccaggctcccgagga 4290651

>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     ggtgccgcggcggcccagg 71
              |||||||||||||||||||
Sbjct: 183449 ggtgccgcggcggcccagg 183467

>gb|BC040031.1| Homo sapiens SET binding factor 1, mRNA (cDNA clone
          IMAGE:5770163)
          Length = 2836

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 59 gcggcggcccaggctcccg 77
          |||||||||||||||||||
Sbjct: 39 gcggcggcccaggctcccg 21

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 50      agaggtgccgcggcggccc 68
               |||||||||||||||||||
Sbjct: 2176789 agaggtgccgcggcggccc 2176807

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 54      gtgccgcggcggcccaggc 72
               |||||||||||||||||||
Sbjct: 1493748 gtgccgcggcggcccaggc 1493766

>ref|XM_677925.1| PREDICTED: Danio rerio similar to protein tyrosine phosphatase,
            receptor type, Q isoform 1 precursor (LOC555426), mRNA
          Length = 6675

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 66   cccaggctcccgaggaggg 84
            |||||||||||||||||||
Sbjct: 3024 cccaggctcccgaggaggg 3042

>gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome 9, complete
           sequence
          Length = 189253

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 89  ccctcagcgcgtcagtcaa 107
           |||||||||||||||||||
Sbjct: 694 ccctcagcgcgtcagtcaa 712

>gb|U82324.1|MMU82324 Mus musculus A6 gene product mRNA, complete cds
          Length = 1200

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 59 gcggcggcccaggctcccg 77
          |||||||||||||||||||
Sbjct: 55 gcggcggcccaggctcccg 37

>emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, complete sequence
          Length = 185618

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     cccaggctcccgaggaggg 84
              |||||||||||||||||||
Sbjct: 138908 cccaggctcccgaggaggg 138890

>dbj|AK057985.1| Homo sapiens cDNA FLJ25256 fis, clone STM03946, highly similar to
          Homo sapiens nuclear dual-specificity phosphatase
          (SBF1) mRNA
          Length = 3090

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 59 gcggcggcccaggctcccg 77
          |||||||||||||||||||
Sbjct: 49 gcggcggcccaggctcccg 31

>gb|AF091043.1|AF091043 Coturnix coturnix japonica POU-box protein brain-2 mRNA, complete cds
          Length = 1466

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    acgccgccgcaccacgggg 19
            |||||||||||||||||||
Sbjct: 1280 acgccgccgcaccacgggg 1298

>gb|AC144813.3| Mus musculus BAC clone RP24-324I23 from 9, complete sequence
          Length = 146104

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    ccctcagcgcgtcagtcaa 107
             |||||||||||||||||||
Sbjct: 19876 ccctcagcgcgtcagtcaa 19858


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 846,295
Number of Sequences: 3902068
Number of extensions: 846295
Number of successful extensions: 54983
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54556
Number of HSP's gapped (non-prelim): 427
length of query: 138
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 117
effective length of database: 17,151,101,840
effective search space: 2006678915280
effective search space used: 2006678915280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)