Clone Name | bastl21c12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FA84A_BOVIN (Q3ZCA1) Protein FAM84A | 28 | 8.9 | 2 | Y5843_ARATH (Q9FT92) Protein At5g08430 | 28 | 8.9 |
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>FA84A_BOVIN (Q3ZCA1) Protein FAM84A| Length = 297 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 7/44 (15%) Frame = +3 Query: 327 LRALCAHGQLPQALWLLESSPDPPDEDAYVALF-------HLCE 437 L ALC G L + LW L+ +P+PP + A++ HLC+ Sbjct: 121 LPALCEPGDLLELLW-LQPAPEPPAPAPHWAVYVGGGQIIHLCQ 163
>Y5843_ARATH (Q9FT92) Protein At5g08430| Length = 553 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -2 Query: 313 SEGVAEAEEDASDGGDGETATQVVEELRRL 224 SE + +++D D GDGET VE++R L Sbjct: 462 SEVIELSDDDEDDNGDGETLDPKVEDVRVL 491 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.131 0.467 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,817,907 Number of Sequences: 219361 Number of extensions: 308914 Number of successful extensions: 1506 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1475 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1505 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)