>CSPG2_HUMAN (P13611) Versican core protein precursor (Large fibroblast|
            proteoglycan) (Chondroitin sulfate proteoglycan core
            protein 2) (PG-M) (Glial hyaluronate-binding protein)
            (GHAP)
          Length = 3396

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = +3

Query: 126  PHYQAATLIASPSYPDAITWPSDNLM----AVASGHIVTILNPAALDG-PRGLVVLRPRD 290
            P+Y   TL  S     +   PS  L     + ASGH   I  P+AL G   G  V+ P+D
Sbjct: 2805 PYYTDTTLAVSTFAKLSSQTPSSPLTIYSGSEASGH-TEIPQPSALPGIDVGSSVMSPQD 2863

Query: 291  PFPIGVVNREDLFEPS-------LVPTSLARDTE 371
             F    VN E  F+PS         P SL+ DT+
Sbjct: 2864 SFKEIHVNIEATFKPSSEEYLHITEPPSLSPDTK 2897

>DNBI_HCMVA (P17147) Major DNA-binding protein (MDBP)|
          Length = 1235

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -2

Query: 212 GNGHQVVAWPSDGVWIGRGGNQGGGL-VMRSHGQRNLRASNPKARR 78
           G G  V   PSDG+  GRGG  GG    M   G R L AS  +  R
Sbjct: 554 GGGRDVSGGPSDGLGGGRGGGGGGDSGGMMGRGGRMLGASVDRTYR 599

>NUPL1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like 1)|
          Length = 587

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -3

Query: 298 GKGSLGRSTTSPRGPSSAAGFRIVTMWPEATAIKLSLGQVMAS 170
           G G+LG +T +P G  + +GF   T+     ++ L+ G + +S
Sbjct: 8   GSGTLGSTTVAPGGTGAGSGFSFGTVASSTPSVGLNFGSLGSS 50

>DHE3_BACTN (P94598) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)|
           (NAD(P)H-utilizing glutamate dehydrogenase)
          Length = 444

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -3

Query: 325 RSSLLTTPMGKGSLGRSTTSPRGPSSAAGFRIV 227
           ++SL T PMG G  G S  SPRG S+A   R V
Sbjct: 112 KNSLTTLPMGGGK-GGSDFSPRGKSNAEVMRFV 143

>SYQ_DROME (Q9Y105) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)|
           (Glutamine--tRNA ligase) (GlnRS)
          Length = 778

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 271 LCFALGILFPLEWSTGKISLN 333
           LC ALGI  P++W  G++++N
Sbjct: 473 LCNALGIYCPVQWEYGRLNMN 493

>DCD_COREF (Q8FM44) Deoxycytidine triphosphate deaminase (EC 3.5.4.13) (dCTP|
           deaminase)
          Length = 193

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 322 SSLLTTPMGKGSLGRSTTSPRGPSSAAGF 236
           SS   TP G GSLG      RGP+ + G+
Sbjct: 155 SSPAETPYGSGSLGSKYQGQRGPTPSKGY 183


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,843,247
Number of Sequences: 219361
Number of extensions: 1356719
Number of successful extensions: 4242
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4238
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)