ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl21c06 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 231 bits (589), Expect = 7e-61 Identities = 116/116 (100%), Positives = 116/116 (100%) Frame = +2 Query: 107 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 286 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST Sbjct: 1 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Query: 287 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN Sbjct: 61 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 116
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 198 bits (504), Expect = 5e-51 Identities = 95/116 (81%), Positives = 110/116 (94%), Gaps = 1/116 (0%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 289 +LGG+IDT+TG++K +RLKGTVVLMRKNVLDLNDFGAT+IDG+GEFLGKGVTCQLISSTA Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60 Query: 290 VDQDNGGRGKVGAEAELEQWVT-SLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 VD +NG RGKVGAEA LEQW+T SLPSLTTGES+FG+TFDW+V+KLGVPGAI+V N Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKN 116
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 183 bits (465), Expect = 2e-46 Identities = 86/115 (74%), Positives = 104/115 (90%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 289 +LGG+I LTG NK+ARLKG++VLMRKN LD+NDFGAT+IDGI EFLG+GVTCQL+SS+ Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59 Query: 290 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 VD +NG RG+VG EA LEQW+TSLPSLTTGESKFG+TF+WEVEK+G+PGAI+V N Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKN 114
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 125 bits (315), Expect = 4e-29 Identities = 60/115 (52%), Positives = 84/115 (73%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 289 +LGGL D LTG N + ++KG VLM + +LD DF A+++D + E G +TCQL+S+T Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Query: 290 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 DQ+N GRG VG+EA LEQ +T LPS++ GESK + F+WE++K GVPGAI++ N Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKN 114
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 118 bits (296), Expect = 6e-27 Identities = 58/118 (49%), Positives = 79/118 (66%), Gaps = 3/118 (2%) Frame = +2 Query: 110 LLGGLIDTLTGANKSA---RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLIS 280 + G L D LTG ++KGTVVLM+KNVLD NDF A+ +D + EFLG +T +L+S Sbjct: 1 MFGELRDLLTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVS 60 Query: 281 STAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 S D +NG +GK+G A LE W+T++ SLT GES F +TFD+E + G PGA ++ N Sbjct: 61 SDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETD-FGYPGAFLIRN 117
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 110 bits (276), Expect = 1e-24 Identities = 53/116 (45%), Positives = 80/116 (68%) Frame = +2 Query: 107 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 286 M LGG++D + G + ++KG V+LM+KNVLD + GA+++DGI + LG+ V+ QLIS Sbjct: 1 MSLGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISG- 59 Query: 287 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 +V+ D G GK+ A LE W+T + +T GES F +TFDW+ ++ GVPGA ++ N Sbjct: 60 SVNYD-GLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWDRDEFGVPGAFIIKN 114
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 108 bits (271), Expect = 5e-24 Identities = 58/122 (47%), Positives = 81/122 (66%), Gaps = 6/122 (4%) Frame = +2 Query: 107 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLG--KGVTC 268 M + G D LTG NK A R++GT VL++K+VL L DF A+++DG+ LG +GV Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 269 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 448 +L+S+TA D NGGRGK+G A LE+ V ++ S GES F + F+W+ E G+PGA+VV Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119 Query: 449 NN 454 N Sbjct: 120 TN 121
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 97.8 bits (242), Expect = 1e-20 Identities = 55/115 (47%), Positives = 73/115 (63%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 289 L+GGLI G + S ++KGTVV+M+KN LD D ++ D I E LG+ V+ QLISS Sbjct: 5 LVGGLIG---GHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 290 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 D NG +GK A LE ++ +L L GE+ FG+TFDW E+ GVPGA V+ N Sbjct: 62 SDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKN 115
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 89.0 bits (219), Expect = 5e-18 Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 18/121 (14%) Frame = +2 Query: 146 NKSARLKGTVVLMRKNVLDLN--------------DFGATII----DGIGEFLGKGVTCQ 271 NK +++GTVVLMRKNVLD N D G II DG+ FLG+ V+ Q Sbjct: 10 NKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQ 69 Query: 272 LISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN 451 LIS+T D + G+GKVG + LE + SLP+L GES F + F+W+ E +G+PGA + Sbjct: 70 LISATKSDAN--GKGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWDHE-MGIPGAFYIK 126 Query: 452 N 454 N Sbjct: 127 N 127
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 86.3 bits (212), Expect = 3e-17 Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Frame = +2 Query: 140 GANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGK 319 G + S ++KGTVV+M KNVLD D ++ I + LG+ V+ QLISS D NG +GK Sbjct: 12 GHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQGDPTNGLQGK 71 Query: 320 VGAEAELEQWVTSLPSLTTG-ESKFGLTFDWEVEKLGVPGAIVVNN 454 A LE + +L LT G E+ FG+TFDW E+ GVPGA ++ N Sbjct: 72 HSNPAYLENSLFTLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKN 116
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 84.7 bits (208), Expect = 1e-16 Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 13/116 (11%) Frame = +2 Query: 146 NKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFLGKGVTCQLISST 286 N+ ++KGTVVLMRKNVLD+N D + +D + FLG+ V+ QLIS+T Sbjct: 10 NRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISAT 69 Query: 287 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 D G+GK+G LE ++SLP+L G+S F + F+W+ + +G+PGA + N Sbjct: 70 KPDAT--GKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWD-DDMGIPGAFYIKN 122
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 84.3 bits (207), Expect = 1e-16 Identities = 46/99 (46%), Positives = 65/99 (65%) Frame = +2 Query: 158 RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAE 337 ++KGTVVLM KN L++N G+ + D + FLG+ V+ QLIS+T D G+GKVG + Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTF 63 Query: 338 LEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 LE TSLP+L GES F + F+W+ +G+PGA + N Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKN 101
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 80.5 bits (197), Expect = 2e-15 Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 18/117 (15%) Frame = +2 Query: 158 RLKGTVVLMRKNVLDLNDFG------------------ATIIDGIGEFLGKGVTCQLISS 283 ++KGTVVLMRKNVLD N + +D + FLG+ V QLIS+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISA 77 Query: 284 TAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 T + G+GKVG + LE + SLP+L GES F + F+W+ E +G+PGA + N Sbjct: 78 TKPLAN--GKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWD-ESMGIPGAFYIKN 131
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 79.0 bits (193), Expect = 5e-15 Identities = 49/128 (38%), Positives = 74/128 (57%), Gaps = 13/128 (10%) Frame = +2 Query: 110 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFL 250 +LGGL+ ++ ++KGTVVLMRKNVL +N D + +D + FL Sbjct: 1 MLGGLL------HRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFL 54 Query: 251 GKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGV 430 G+ V+ QLIS+T D + G+GK+G LE +TSLP+L G+S F + F+W+ + G+ Sbjct: 55 GRPVSLQLISATKADAN--GKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWD-DGSGI 111 Query: 431 PGAIVVNN 454 GA + N Sbjct: 112 LGAFYIKN 119
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 76.3 bits (186), Expect = 4e-14 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 20/122 (16%) Frame = +2 Query: 149 KSARLKGTVVLMRKNVLDLNDFGA--------------------TIIDGIGEFLGKGVTC 268 + +LKGTV+LM+KNVLD+N A +IID FLG+ V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 269 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 448 +LIS+T D G+GKV EA LE +TS+P+L +S F + F+W+ +G PGA + Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWD-SNMGTPGAFYI 124 Query: 449 NN 454 N Sbjct: 125 EN 126
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 73.6 bits (179), Expect = 2e-13 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 22/125 (17%) Frame = +2 Query: 146 NKSARLKGTVVLMRKNVLDLNDF------------------GATIIDGIGE----FLGKG 259 +K ++KGTVVLM KNVLD N G +++ G+ + FLG+ Sbjct: 6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRN 65 Query: 260 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGA 439 ++ QLIS+T D G GKVG E LE+ + +LP+L + F + F+W+ G+PGA Sbjct: 66 ISMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDA-SFGIPGA 122 Query: 440 IVVNN 454 + N Sbjct: 123 FYIKN 127
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 70.5 bits (171), Expect = 2e-12 Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 22/125 (17%) Frame = +2 Query: 146 NKSARLKGTVVLMRKNVLDLNDFGAT----------------------IIDGIGEFLGKG 259 N+ ++KGTVVLM KNV D N+F +T I+DG + Sbjct: 6 NRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN 65 Query: 260 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGA 439 + QLIS+T D G GKVG + LE+ + SLP+L + F + F+W+ E G+P A Sbjct: 66 IAIQLISATKT--DGLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWD-ENFGIPEA 122 Query: 440 IVVNN 454 + N Sbjct: 123 FYIKN 127
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 70.5 bits (171), Expect = 2e-12 Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 13/115 (11%) Frame = +2 Query: 149 KSARLKGTVVLMRKNVLDLNDF---GATIIDGIGEFLGKGV----------TCQLISSTA 289 K ++KGT+V+M+KNVLD+N G + G+G F+G V + QLIS+T Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLG-FIGSAVDALTFAATKISIQLISATK 65 Query: 290 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 454 D GG+GK+G L +T LP+L GE + + F+W+ + G+PGA + N Sbjct: 66 AD---GGKGKIGKSTNLRGKIT-LPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKN 115
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 34.3 bits (77), Expect = 0.15 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT---PLPR 247 S +QS RP +PV + + + T P PL+ ++ + S V +P+ Sbjct: 1645 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQ 1704 Query: 246 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 130 N S V P +L SS + T PL + PV++ Sbjct: 1705 NIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQL 1743
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 32.7 bits (73), Expect = 0.45 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 238 S + + R LDS V+ +V C +S + PRP ++W +++ LPR +P Sbjct: 397 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTP 452 Query: 237 MP--SMMVAP 214 + S++++P Sbjct: 453 LESGSLLISP 462
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 32.0 bits (71), Expect = 0.76 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = -1 Query: 438 APGTPSFSTSQSK-VRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQV 262 A + S TSQ+K + P+ P +S + + A APT P PP T + + + Sbjct: 83 AASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATET 142 Query: 261 TPLPRNSPMPS 229 P P+P+ Sbjct: 143 VTTPIPEPVPA 153
>SYS_NEIMA (Q9JT77) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 431 Score = 31.6 bits (70), Expect = 0.99 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Frame = +2 Query: 128 DTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNG 307 D L KS ++K + +N + GA + G G+ V ++ D + Sbjct: 31 DALEERRKSVQVKTEELQASRNSIS-KQIGA--LKGQGKHEEAQVAMDQVAQIKTDLEQA 87 Query: 308 GRGKVGAEAELEQWVTSLPSLTTGESKFGL--TFDWEVEKLGVP 433 + EL+ W+ S+P+L + FG T + EV K+G P Sbjct: 88 AADLDAVQKELDAWLLSIPNLPHEDVPFGKDETENVEVRKVGTP 131
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 31.6 bits (70), Expect = 0.99 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Frame = -1 Query: 438 APGTPSFSTS-QSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQV 262 +P TP +TS Q+K+RPNL P T S SA PL+ +++ Sbjct: 1147 SPWTPVVTTSTQTKIRPNLPIP-------STVLRKSGSATVSKPAPLNTFLSIKSSGTST 1199 Query: 261 TPLPRNSPMPSMMVAPKSLRSSTF 190 PLP S ++ P + S F Sbjct: 1200 KPLPVVKESSSDLLLPPDIISKAF 1223
>COBM_PSEDE (P21922) Precorrin-4 C(11)-methyltransferase (EC 2.1.1.133)| (Precorrin-3 methylase) Length = 253 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 444 TMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSAS 328 TM PG PSF+ + S + L P V+ ++T S AS Sbjct: 105 TMTPGVPSFAAAASALGRELTIPAVAQSLVLTRVSGRAS 143
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 131 TLTGANKSARLKGTVVLMRKNVLDLNDFGATI 226 TL G K R +GTV+ + + +L DFGAT+ Sbjct: 261 TLEGTRKQIREEGTVITGQNQLQNLGDFGATL 292
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 30.8 bits (68), Expect = 1.7 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -1 Query: 426 PSFSTSQSKVRPN-LDSPVVSDGRLVTHCSSSASAPTFPRPPLSWS-TAVELISWQVTPL 253 PS + + S PN L +P +G + +A T P PPLS + ++V ++S PL Sbjct: 933 PSRAKAVSVAPPNILSTPTPLNG------IPANAASTMPPPPLSRAPSSVSMVS--PPPL 984 Query: 252 PRNSPMPSMMVAPKSLRSS 196 +NS +PS++ +S R+S Sbjct: 985 HKNSRVPSLVATSESPRAS 1003
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 3/99 (3%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT---PLPR 247 S +QS RP +PV + + + T P PL+ ++ + S V +P+ Sbjct: 1648 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPATPLTTNSGLMPPSVAVVGPLHIPQ 1707 Query: 246 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 130 N S V P SS + T PL + PV++ Sbjct: 1708 NIKFSSAPVTPNVPSSSPAPNIQTGRPLVLSSRATPVQL 1746
>AMPR_PSEAE (P24734) HTH-type transcriptional activator ampR| Length = 296 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -3 Query: 442 DGARHPELLHLPVEGEAELG--LPRRQRRQARHPLLQLRLRAH 320 +G + ++L + G +G LPR + QARHP + LRL H Sbjct: 88 EGGHYRDVLTVGAVGTFTVGWLLPRLEDFQARHPFIDLRLSTH 130
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = -1 Query: 402 KVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLS 298 +++P + +PVV+ ++ SSS+SAP P PP S Sbjct: 552 EIKPYVVNPVVATAAAASNSSSSSSAPLPPPPPPS 586
>STE7_SCHPO (Q10136) Protein ste7| Length = 569 Score = 30.4 bits (67), Expect = 2.2 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 8/87 (9%) Frame = -1 Query: 453 LLTTMAPGTPSFSTSQSKVRPNLDSPVV--------SDGRLVTHCSSSASAPTFPRPPLS 298 + T+ A T FSTS S ++ +PV+ + SSS+ AP PR S Sbjct: 197 ITTSSATHTSQFSTSSSSSVNSVHTPVMVPNPYFQYNSSMTAPSSSSSSVAPFVPRRQFS 256 Query: 297 WSTAVELISWQVTPLPRNSPMPSMMVA 217 S+A + ++ P P PS A Sbjct: 257 VSSASDPPQTPISMSPPIPPTPSQFSA 283
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 2.9 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%) Frame = -1 Query: 447 TTMAPG---TPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 277 TT+A G TPS ST S P+L + + + + S++ T P PP+ L Sbjct: 4598 TTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPV-------L 4650 Query: 276 ISWQVTPLPRNSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPV 136 S TP +S S +P++ ++T +++T S A F P+ Sbjct: 4651 TSMATTPAATSSKATSSS-SPRT--ATTLPVLTSTATKSTATSFTPI 4694 Score = 29.6 bits (65), Expect = 3.8 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 18/118 (15%) Frame = -1 Query: 453 LLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELI 274 + T + PS + + + P L S + + +SS+S T P+ STA + Sbjct: 4628 ITATGSTTNPSSTPGTTPIPPVLTSMATTPAATSSKATSSSSPRTATTLPVLTSTATKST 4687 Query: 273 SWQVTPLPRN-------------SPMPSMMV-----APKSLRSSTFLRMSTTVPLSRA 154 + TP+P + +PM +M P++ +ST L +TT ++RA Sbjct: 4688 ATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIHTSSTPETTHTSTVL--TTTATMTRA 4743 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/69 (27%), Positives = 33/69 (47%) Frame = -1 Query: 447 TTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISW 268 +T + TPS + + L SP + + +SS+S T P+ STA + + Sbjct: 4204 STGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTATKSTAT 4263 Query: 267 QVTPLPRNS 241 VTP+P ++ Sbjct: 4264 SVTPIPSST 4272
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -1 Query: 444 TMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVT-HCSSSASAPTFPRPPLSWSTAVELISW 268 T+APGTP +S++ + G T HCS++ + P P + WS + W Sbjct: 2527 TVAPGTPQVQVEESEL-------TLEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 267 Q 265 Q Sbjct: 2576 Q 2576
>ZN318_HUMAN (Q5VUA4) Zinc finger protein 318 (Endocrine regulatory protein)| Length = 2099 Score = 29.6 bits (65), Expect = 3.8 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%) Frame = -1 Query: 438 APGTPSFSTS-QSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQV 262 +P P +TS Q+K+RPNL P L CS++ S P PL+ +++ Sbjct: 1154 SPWMPVVTTSTQTKIRPNLPIPSTV---LRKSCSATMSKPA----PLNTFLSIKSSGTTA 1206 Query: 261 TPLPRNSPMPSMMVAPKSLRSSTF 190 PLP + ++ P + S F Sbjct: 1207 KPLPVVKESSADLLLPPDIISKAF 1230
>SYA_PORGI (Q7MV54) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 29.6 bits (65), Expect = 3.8 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 17/94 (18%) Frame = +2 Query: 161 LKGTVVLMRKNVLDLNDFGATIIDGIGEF-------LGKGVTCQLISSTAVDQDNGG--- 310 L+ + L+ K + D G+T++DG+ F +T ++S + D G Sbjct: 375 LETGIRLLEKKIADNKATGSTVLDGVAAFELYDTFGFPLDLTALILSENGMTVDESGFDT 434 Query: 311 -------RGKVGAEAELEQWVTSLPSLTTGESKF 391 R + A E WV L GESKF Sbjct: 435 EMQKQKERARNAAAVEAGDWVV----LREGESKF 464
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = -1 Query: 405 SKVRPNL-----DSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNS 241 + + PN+ DS V+ ++ +C +S + PRP ++W +++ LPR + Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGA----PRPAITWQKGERILASGSVQLPRFT 458 Query: 240 PMP--SMMVAPKSL 205 + S++V+P L Sbjct: 459 LLESGSLLVSPAHL 472
>NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)| (Amplified in breast cancer-1 protein homolog) (AIB-1) (Fragment) Length = 1082 Score = 29.3 bits (64), Expect = 4.9 Identities = 21/79 (26%), Positives = 34/79 (43%) Frame = -1 Query: 432 GTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPL 253 G+P ++ Q + SP+ S G +H SS+S +S L+S +P Sbjct: 188 GSPKMASHQFSPAAGVHSPMGSSGNTGSHSFSSSSLSAL--QAISEGVGTSLLSTLSSPG 245 Query: 252 PRNSPMPSMMVAPKSLRSS 196 P+ P+M + S SS Sbjct: 246 PKLDNSPNMNINQPSKASS 264
>GP1BA_HUMAN (P07359) Platelet glycoprotein Ib alpha chain precursor| (Glycoprotein Ibalpha) (GP-Ib alpha) (GPIbA) (GPIb-alpha) (Antigen CD42b-alpha) (CD42b antigen) [Contains: Glycocalicin] Length = 626 Score = 29.3 bits (64), Expect = 4.9 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 238 ST++ P PV +T + S PT P P + A + + TP+P + Sbjct: 378 STTEPTPSPTTSEPVPEPAPNMTTLEPTPS-PTTPEP--TSEPAPSPTTPEPTPIPTIAT 434 Query: 237 MPSMMVAPKSLRSSTFLRMSTTVPLS 160 P+++V+ SL + ++TT P+S Sbjct: 435 SPTILVSATSLITPKSTFLTTTKPVS 460
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 14/88 (15%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP---- 250 STS +P LD+ +DG S ASA P+P + + + S TP P Sbjct: 842 STSNETTKPQLDTSSKTDGVTANAPFSFASAFNAPKPSTNTADGKDSASNLTTPSPAFSF 901 Query: 249 ----------RNSPMPSMMVAPKSLRSS 196 N+P + AP S +S Sbjct: 902 GNNSGVKASSNNNPSTNSSTAPFSFGTS 929
>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112| Length = 2799 Score = 28.9 bits (63), Expect = 6.4 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -1 Query: 426 PSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVE--LISWQVTPL 253 PS STS + L + ++ T + + P+ S S + +++W ++ L Sbjct: 1891 PSLSTSLRAITSTLADVKHTFEKMTTSVTPGTTLPSILSGATSGSVISKSPILTWLLSSL 1950 Query: 252 PRNSPMPSMMVAPKSLRSST 193 P SP ++ AP + SST Sbjct: 1951 PSGSPPATVSNAPHVMTSST 1970
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Frame = -1 Query: 348 HCSSSASAPTFPRPPLSWS-----TAVELI--SWQVTPLPRNSPMPSMM----VAPKSLR 202 HC+S SAP++ P S S TA+ L SW+ P P+ + + P++ R Sbjct: 3 HCASIVSAPSYAFPFRSGSASTTPTAISLTKRSWKPPPSMAKGPVRATVSIEKETPEANR 62 Query: 201 SSTFLR 184 TFLR Sbjct: 63 PETFLR 68
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 315 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 356 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 195 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 292 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 333
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -1 Query: 417 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 238 S + + R LDS V+ +V C +S + PRP ++W +++ LPR + Sbjct: 403 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTL 458 Query: 237 MP--SMMVAP 214 + S++++P Sbjct: 459 LESGSLLISP 468
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.5 bits (62), Expect = 8.4 Identities = 26/90 (28%), Positives = 36/90 (40%) Frame = -1 Query: 429 TPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP 250 TPS ST++S P S S VT ++ +S+ P P S++ S P P Sbjct: 670 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP----SSSTTESSSAPVPTP 725 Query: 249 RNSPMPSMMVAPKSLRSSTFLRMSTTVPLS 160 +S S + SST S V S Sbjct: 726 SSSTTESSSAPVPTPSSSTTESSSAPVTSS 755 Score = 28.5 bits (62), Expect = 8.4 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Frame = -1 Query: 429 TPSFSTSQSKVRPNLDSPVVSDGRLV-THCSSSASAPTFPRPPLSWSTAVELISWQVTPL 253 TPS ST++S P S S V T SS+ + + P P S ST + TP Sbjct: 613 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPS 672 Query: 252 PRNSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAP 139 + S V + SS+ S+T S A + P Sbjct: 673 SSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP 710 Score = 28.5 bits (62), Expect = 8.4 Identities = 21/90 (23%), Positives = 38/90 (42%) Frame = -1 Query: 429 TPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP 250 TPS ST++S P S S VT ++ +S+ P P S + + T Sbjct: 358 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTES 417 Query: 249 RNSPMPSMMVAPKSLRSSTFLRMSTTVPLS 160 ++P+ S S ++ S++ P++ Sbjct: 418 SSAPVTSSTTESSSAPVTSSTTESSSAPVT 447
>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) (Brain-derived HLMN protein) Length = 5038 Score = 28.5 bits (62), Expect = 8.4 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 4/91 (4%) Frame = -1 Query: 453 LLTTMAPGTPSFSTSQSKVRPNLDSPVV----SDGRLVTHCSSSASAPTFPRPPLSWSTA 286 L T A + SF + + P LDS + SD ++V+H ++ + + P+ Sbjct: 708 LKTDSAKTSQSFPPTGDTITP-LDSKAMPRPASDSKIVSHPGPTSES----KDPVQKKEE 762 Query: 285 VELISWQVTPLPRNSPMPSMMVAPKSLRSST 193 + +VTP P P+P P R +T Sbjct: 763 PKKAQTKVTPKPDTKPVPKGSPTPSGTRPTT 793
>ELF1_MOUSE (Q60775) ETS-related transcription factor Elf-1 (E74-like factor 1)| Length = 612 Score = 28.5 bits (62), Expect = 8.4 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Frame = -1 Query: 453 LLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTF--PRPPLSWSTAVE 280 +L + PG+PS S ++V+ L S V S + S ASAP+F P +++S + + Sbjct: 481 MLQSQKPGSPSIVLSPTQVQQVLTSNVQS---ICNGAGSVASAPSFSATTPVVTFSRSSQ 537 Query: 279 LIS 271 L++ Sbjct: 538 LVA 540
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 28.5 bits (62), Expect = 8.4 Identities = 25/84 (29%), Positives = 35/84 (41%) Frame = -1 Query: 438 APGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT 259 AP T++ V+PN PV + T TF RPP++ ST + V Sbjct: 404 APPEDEPITAKEAVKPN--QPV----EVQTPLPKQELPETFQRPPIASSTPMPRAEPSVI 457 Query: 258 PLPRNSPMPSMMVAPKSLRSSTFL 187 P RN P+ L++S FL Sbjct: 458 PAARNEPI--------GLKASDFL 473
>TARSH_HUMAN (Q7Z7G0) Target of Nesh-SH3 precursor (Tarsh) (Nesh-binding| protein) (NeshBP) (ABI gene family member 3-binding protein) Length = 1075 Score = 28.5 bits (62), Expect = 8.4 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Frame = -1 Query: 447 TTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSA--SAPTFPRPPLSWSTAVELI 274 TT APG F + + K+ SP V+ + + A T PRP + + V + Sbjct: 505 TTPAPGKTQFISLKPKIPL---SPEVTHTKPAPKQTPRAPPKPKTSPRPRIPQTQPVPKV 561 Query: 273 SWQVTPLPRNSPMPSMMV---APKSL 205 +VT P+ SP P + APK + Sbjct: 562 PQRVTAKPKTSPSPEVSYTTPAPKDV 587
>CFLAR_MOUSE (O35732) CASP8 and FADD-like apoptosis regulator precursor| (Cellular FLICE-like inhibitory protein) (c-FLIP) (Caspase-eight-related protein) (Casper) (Caspase-like apoptosis regulatory protein) (CLARP) (MACH-related inducer of toxicity) (MRIT Length = 484 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +2 Query: 182 MRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSL 361 +R+N ++D+ +++ IGE L + L+ T + +D GRGK+ + V L Sbjct: 88 LRRNPHLVSDYRVLLME-IGESLDQNDVSSLVFLTRITRDYTGRGKIAKDKSFLDLVIEL 146 Query: 362 PSL 370 L Sbjct: 147 EKL 149
>CELR1_MOUSE (O35161) Cadherin EGF LAG seven-pass G-type receptor 1 precursor| Length = 3034 Score = 28.5 bits (62), Expect = 8.4 Identities = 23/78 (29%), Positives = 34/78 (43%) Frame = -1 Query: 453 LLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELI 274 L+ GTPS S S S NL P R + S+++P FP P Sbjct: 215 LVIQATSGTPSESPSVSPSLLNLSQPRAGVVRRSRRGTGSSTSPQFPLP----------- 263 Query: 273 SWQVTPLPRNSPMPSMMV 220 S+QV+ +P N P + ++ Sbjct: 264 SYQVS-VPENEPAGTAVI 280
>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2| zinc finger protein) Length = 307 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +1 Query: 70 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAH 183 G + RRGG DA G D GG R GG H Sbjct: 116 GRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.132 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,919,387 Number of Sequences: 219361 Number of extensions: 951700 Number of successful extensions: 3111 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 2870 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3069 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
