ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl21c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470356.1| Oryza sativa (japonica cultivar-group), mRNA 100 9e-18
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 100 9e-18
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
4gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 100 9e-18
5dbj|AK119894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
6dbj|AK119881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
7dbj|AK119863.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
8dbj|AK066616.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
9gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
10gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
12ref|NM_187685.1| Oryza sativa (japonica cultivar-group), predic... 44 0.44
13gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
14gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
15gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
16gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
17gb|AC002412.3| Homo sapiens chromosome X clone bWXD105, complete... 44 0.44
18dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.44
19gb|AC004075.1|AC004075 Homo Sapiens Chromosome X clone bWXD90, c... 44 0.44
20ref|XM_862579.1| PREDICTED: Canis familiaris hypothetical protei... 42 1.7
21gb|AC094527.7| Rattus norvegicus 5 BAC CH230-4L11 (Children's Ho... 42 1.7
22ref|XM_478725.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
23gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.8
24gb|AY242831.1| Bradyrhizobium liaoningense strain ESG2281 RNA po... 40 6.8
25emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 6.8
26emb|AL589949.15| Human DNA sequence from clone RP11-169F1 on chr... 40 6.8
27ref|XM_502413.1| Yarrowia lipolytica CLIB122, YALI0D04697g predi... 40 6.8
28emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.8
29emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.8
30dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
31gb|AC092153.4| Homo sapiens BAC clone RP11-252K7 from 2, complet... 40 6.8
32gb|AC092093.34| Mus musculus strain C57BL/6J chromosome 10 clone... 40 6.8
33gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.8
34gb|AC022898.11| Homo sapiens chromosome 15, clone RP11-554D20, c... 40 6.8
35dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
36dbj|AK072020.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
37gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 40 6.8
38gb|AC113058.6| Mus musculus chromosome 6, clone RP23-253C24, com... 40 6.8
39emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 6.8
40gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone... 40 6.8 
>ref|XM_470356.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3105

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 155/187 (82%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                       
Query: 270 gctgcttcttgctcctcccgctcctccctttcctgtcccatggcaaggacatgcccctgg 329
           ||||||||||||| ||||   ||| |||| |||| |||||||||  |||||||||  |||
Sbjct: 250 gctgcttcttgctgctcc---tccaccctctcctctcccatggcgcggacatgccgttgg 306

                                                                       
Query: 330 gctccaccctcacgccgggcggcaactcggcggcgtgggcctcgcccaactccaccttct 389
           ||||| ||||| |||||| ||  |||  ||||  |||| | || ||||||  ||||||||
Sbjct: 307 gctcctccctctcgccgg-cg--aaccaggcgttgtggtcgtctcccaacaacaccttct 363

                                                                       
Query: 390 ccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggtcacctacg 449
           ||||| ||||| || ||||||||||||| ||||| ||||||||||||||  |||||||||
Sbjct: 364 ccctctccttcacggcgtccccgacctcgccgtccctcttcgtcgccgccatcacctacg 423

                  
Query: 450 ccggcgg 456
           |||||||
Sbjct: 424 ccggcgg 430
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 155/187 (82%), Gaps = 6/187 (3%)
 Strand = Plus / Minus

                                                                            
Query: 270      gctgcttcttgctcctcccgctcctccctttcctgtcccatggcaaggacatgcccctgg 329
                ||||||||||||| ||||   ||| |||| |||| |||||||||  |||||||||  |||
Sbjct: 34918468 gctgcttcttgctgctcc---tccaccctctcctctcccatggcgcggacatgccgttgg 34918412

                                                                            
Query: 330      gctccaccctcacgccgggcggcaactcggcggcgtgggcctcgcccaactccaccttct 389
                ||||| ||||| |||||| ||  |||  ||||  |||| | || ||||||  ||||||||
Sbjct: 34918411 gctcctccctctcgccgg-cg--aaccaggcgttgtggtcgtctcccaacaacaccttct 34918355

                                                                            
Query: 390      ccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggtcacctacg 449
                ||||| ||||| || ||||||||||||| ||||| ||||||||||||||  |||||||||
Sbjct: 34918354 ccctctccttcacggcgtccccgacctcgccgtccctcttcgtcgccgccatcacctacg 34918295

                       
Query: 450      ccggcgg 456
                |||||||
Sbjct: 34918294 ccggcgg 34918288



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 476     ggcgccggcgcgcccgtcgact 497
               ||||||||||||||||||||||
Sbjct: 6356616 ggcgccggcgcgcccgtcgact 6356595
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 155/187 (82%), Gaps = 6/187 (3%)
 Strand = Plus / Minus

                                                                            
Query: 270      gctgcttcttgctcctcccgctcctccctttcctgtcccatggcaaggacatgcccctgg 329
                ||||||||||||| ||||   ||| |||| |||| |||||||||  |||||||||  |||
Sbjct: 35008540 gctgcttcttgctgctcc---tccaccctctcctctcccatggcgcggacatgccgttgg 35008484

                                                                            
Query: 330      gctccaccctcacgccgggcggcaactcggcggcgtgggcctcgcccaactccaccttct 389
                ||||| ||||| |||||| ||  |||  ||||  |||| | || ||||||  ||||||||
Sbjct: 35008483 gctcctccctctcgccgg-cg--aaccaggcgttgtggtcgtctcccaacaacaccttct 35008427

                                                                            
Query: 390      ccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggtcacctacg 449
                ||||| ||||| || ||||||||||||| ||||| ||||||||||||||  |||||||||
Sbjct: 35008426 ccctctccttcacggcgtccccgacctcgccgtccctcttcgtcgccgccatcacctacg 35008367

                       
Query: 450      ccggcgg 456
                |||||||
Sbjct: 35008366 ccggcgg 35008360



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 476     ggcgccggcgcgcccgtcgact 497
               ||||||||||||||||||||||
Sbjct: 6355829 ggcgccggcgcgcccgtcgact 6355808
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>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
             sequence
          Length = 171376

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 155/187 (82%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                         
Query: 270   gctgcttcttgctcctcccgctcctccctttcctgtcccatggcaaggacatgcccctgg 329
             ||||||||||||| ||||   ||| |||| |||| |||||||||  |||||||||  |||
Sbjct: 97012 gctgcttcttgctgctcc---tccaccctctcctctcccatggcgcggacatgccgttgg 97068

                                                                         
Query: 330   gctccaccctcacgccgggcggcaactcggcggcgtgggcctcgcccaactccaccttct 389
             ||||| ||||| |||||| ||  |||  ||||  |||| | || ||||||  ||||||||
Sbjct: 97069 gctcctccctctcgccgg-cg--aaccaggcgttgtggtcgtctcccaacaacaccttct 97125

                                                                         
Query: 390   ccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggtcacctacg 449
             ||||| ||||| || ||||||||||||| ||||| ||||||||||||||  |||||||||
Sbjct: 97126 ccctctccttcacggcgtccccgacctcgccgtccctcttcgtcgccgccatcacctacg 97185

                    
Query: 450   ccggcgg 456
             |||||||
Sbjct: 97186 ccggcgg 97192
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>dbj|AK119894.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-B12, full
           insert sequence
          Length = 3179

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 155/187 (82%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                       
Query: 270 gctgcttcttgctcctcccgctcctccctttcctgtcccatggcaaggacatgcccctgg 329
           ||||||||||||| ||||   ||| |||| |||| |||||||||  |||||||||  |||
Sbjct: 451 gctgcttcttgctgctcc---tccaccctctcctctcccatggcgcggacatgccgttgg 507

                                                                       
Query: 330 gctccaccctcacgccgggcggcaactcggcggcgtgggcctcgcccaactccaccttct 389
           ||||| ||||| |||||| ||  |||  ||||  |||| | || ||||||  ||||||||
Sbjct: 508 gctcctccctctcgccgg-cg--aaccaggcgttgtggtcgtctcccaacaacaccttct 564

                                                                       
Query: 390 ccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggtcacctacg 449
           ||||| ||||| || ||||||||||||| ||||| ||||||||||||||  |||||||||
Sbjct: 565 ccctctccttcacggcgtccccgacctcgccgtccctcttcgtcgccgccatcacctacg 624

                  
Query: 450 ccggcgg 456
           |||||||
Sbjct: 625 ccggcgg 631
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>dbj|AK119881.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-G09, full
           insert sequence
          Length = 3080

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 155/187 (82%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                       
Query: 270 gctgcttcttgctcctcccgctcctccctttcctgtcccatggcaaggacatgcccctgg 329
           ||||||||||||| ||||   ||| |||| |||| |||||||||  |||||||||  |||
Sbjct: 226 gctgcttcttgctgctcc---tccaccctctcctctcccatggcgcggacatgccgttgg 282

                                                                       
Query: 330 gctccaccctcacgccgggcggcaactcggcggcgtgggcctcgcccaactccaccttct 389
           ||||| ||||| |||||| ||  |||  ||||  |||| | || ||||||  ||||||||
Sbjct: 283 gctcctccctctcgccgg-cg--aaccaggcgttgtggtcgtctcccaacaacaccttct 339

                                                                       
Query: 390 ccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggtcacctacg 449
           ||||| ||||| || ||||||||||||| ||||| ||||||||||||||  |||||||||
Sbjct: 340 ccctctccttcacggcgtccccgacctcgccgtccctcttcgtcgccgccatcacctacg 399

                  
Query: 450 ccggcgg 456
           |||||||
Sbjct: 400 ccggcgg 406
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>dbj|AK119863.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-H10, full
           insert sequence
          Length = 3128

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 155/187 (82%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                       
Query: 270 gctgcttcttgctcctcccgctcctccctttcctgtcccatggcaaggacatgcccctgg 329
           ||||||||||||| ||||   ||| |||| |||| |||||||||  |||||||||  |||
Sbjct: 252 gctgcttcttgctgctcc---tccaccctctcctctcccatggcgcggacatgccgttgg 308

                                                                       
Query: 330 gctccaccctcacgccgggcggcaactcggcggcgtgggcctcgcccaactccaccttct 389
           ||||| ||||| |||||| ||  |||  ||||  |||| | || ||||||  ||||||||
Sbjct: 309 gctcctccctctcgccgg-cg--aaccaggcgttgtggtcgtctcccaacaacaccttct 365

                                                                       
Query: 390 ccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggtcacctacg 449
           ||||| ||||| || ||||||||||||| ||||| ||||||||||||||  |||||||||
Sbjct: 366 ccctctccttcacggcgtccccgacctcgccgtccctcttcgtcgccgccatcacctacg 425

                  
Query: 450 ccggcgg 456
           |||||||
Sbjct: 426 ccggcgg 432
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>dbj|AK066616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074M03, full
           insert sequence
          Length = 3051

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 155/187 (82%), Gaps = 6/187 (3%)
 Strand = Plus / Plus

                                                                       
Query: 270 gctgcttcttgctcctcccgctcctccctttcctgtcccatggcaaggacatgcccctgg 329
           ||||||||||||| ||||   ||| |||| |||| |||||||||  |||||||||  |||
Sbjct: 227 gctgcttcttgctgctcc---tccaccctctcctctcccatggcgcggacatgccgttgg 283

                                                                       
Query: 330 gctccaccctcacgccgggcggcaactcggcggcgtgggcctcgcccaactccaccttct 389
           ||||| ||||| |||||| ||  |||  ||||  |||| | || ||||||  ||||||||
Sbjct: 284 gctcctccctctcgccgg-cg--aaccaggcgttgtggtcgtctcccaacaacaccttct 340

                                                                       
Query: 390 ccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggtcacctacg 449
           ||||| ||||| || ||||||||||||| ||||| ||||||||||||||  |||||||||
Sbjct: 341 ccctctccttcacggcgtccccgacctcgccgtccctcttcgtcgccgccatcacctacg 400

                  
Query: 450 ccggcgg 456
           |||||||
Sbjct: 401 ccggcgg 407
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>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
              complete sequence
          Length = 132017

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                          
Query: 382    caccttctccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggt 441
              ||||||||||||| ||||| || ||||||| ||||| ||||| ||||||| ||||||  |
Sbjct: 128850 caccttctccctctccttcacggcgtccccaacctcgccgtccctcttcgccgccgccat 128791

                             
Query: 442    cacctacgccggcgg 456
              |||||||||||||||
Sbjct: 128790 cacctacgccggcgg 128776
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>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0084P24, complete sequence
          Length = 148784

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 382   caccttctccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggt 441
             ||||||||||||| ||||| || ||||||| ||||| ||||| ||||||| ||||||  |
Sbjct: 78462 caccttctccctctccttcacggcgtccccaacctcgccgtccctcttcgccgccgccat 78403

                            
Query: 442   cacctacgccggcgg 456
             |||||||||||||||
Sbjct: 78402 cacctacgccggcgg 78388
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                            
Query: 382      caccttctccctcgccttcgcgccgtccccgacctccccgtcgctcttcgtcgccgcggt 441
                ||||||||||||| ||||| || ||||||| ||||| ||||| ||||||| ||||||  |
Sbjct: 20240190 caccttctccctctccttcacggcgtccccaacctcgccgtccctcttcgccgccgccat 20240131

                               
Query: 442      cacctacgccggcgg 456
                |||||||||||||||
Sbjct: 20240130 cacctacgccggcgg 20240116



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 476     ggcgccggcgcgcccgtcgact 497
               ||||||||||||||||||||||
Sbjct: 3485989 ggcgccggcgcgcccgtcgact 3486010
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>ref|NM_187685.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3393

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 476 ggcgccggcgcgcccgtcgact 497
           ||||||||||||||||||||||
Sbjct: 187 ggcgccggcgcgcccgtcgact 208
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>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22,
              complete sequence
          Length = 177153

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 476    ggcgccggcgcgcccgtcgact 497
              ||||||||||||||||||||||
Sbjct: 115471 ggcgccggcgcgcccgtcgact 115492
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>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0034O12, complete sequence
          Length = 156263

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 476   ggcgccggcgcgcccgtcgact 497
             ||||||||||||||||||||||
Sbjct: 51620 ggcgccggcgcgcccgtcgact 51641
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>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08,
             complete sequence
          Length = 118049

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 476   ggcgccggcgcgcccgtcgact 497
             ||||||||||||||||||||||
Sbjct: 53271 ggcgccggcgcgcccgtcgact 53292
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>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 476   ggcgccggcgcgcccgtcgact 497
             ||||||||||||||||||||||
Sbjct: 36742 ggcgccggcgcgcccgtcgact 36721
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>gb|AC002412.3| Homo sapiens chromosome X clone bWXD105, complete sequence
          Length = 121623

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 99   tcttcccattcccaagccccga 120
            ||||||||||||||||||||||
Sbjct: 8555 tcttcccattcccaagccccga 8534
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 355    ctcggcggcgtgggcctcgccc 376
              ||||||||||||||||||||||
Sbjct: 249814 ctcggcggcgtgggcctcgccc 249835
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>gb|AC004075.1|AC004075 Homo Sapiens Chromosome X clone bWXD90, complete sequence
          Length = 104961

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 99    tcttcccattcccaagccccga 120
             ||||||||||||||||||||||
Sbjct: 22808 tcttcccattcccaagccccga 22787
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>ref|XM_862579.1| PREDICTED: Canis familiaris hypothetical protein LOC610929
           (LOC610929), mRNA
          Length = 996

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 276 tcttgctcctcccgctcctcc 296
           |||||||||||||||||||||
Sbjct: 677 tcttgctcctcccgctcctcc 657
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>gb|AC094527.7| Rattus norvegicus 5 BAC CH230-4L11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216616

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    ctcctccctttcctgtcccat 310
              |||||||||||||||||||||
Sbjct: 188073 ctcctccctttcctgtcccat 188093
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>ref|XM_478725.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1807

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  cgccgtccccgacctccccg 421
            ||||||||||||||||||||
Sbjct: 1004 cgccgtccccgacctccccg 985
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 472     cgcgggcgccggcgcgcccg 491
               ||||||||||||||||||||
Sbjct: 2813504 cgcgggcgccggcgcgcccg 2813523
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>gb|AY242831.1| Bradyrhizobium liaoningense strain ESG2281 RNA polymerase beta
            subunit (rpoB) gene, complete cds
          Length = 4125

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  tcacgccgggcggcaactcg 358
            ||||||||||||||||||||
Sbjct: 3208 tcacgccgggcggcaactcg 3189
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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    gcgggcgccggcgcgcccgt 492
              ||||||||||||||||||||
Sbjct: 225035 gcgggcgccggcgcgcccgt 225016
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>emb|AL589949.15| Human DNA sequence from clone RP11-169F1 on chromosome 10 Contains a CpG
              island, complete sequence
          Length = 153802

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    tgctcctcccgctcctccct 298
              ||||||||||||||||||||
Sbjct: 147691 tgctcctcccgctcctccct 147710
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>ref|XM_502413.1| Yarrowia lipolytica CLIB122, YALI0D04697g predicted mRNA
          Length = 1584

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 gctcctcccgctcctccctt 299
           ||||||||||||||||||||
Sbjct: 944 gctcctcccgctcctccctt 925
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 334     caccctcacgccgggcggcaactcggcg 361
               |||| ||||||||||||||||| |||||
Sbjct: 3172850 caccttcacgccgggcggcaacacggcg 3172877
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 472     cgcgggcgccggcgcgcccg 491
               ||||||||||||||||||||
Sbjct: 3747618 cgcgggcgccggcgcgcccg 3747637
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 402      cgccgtccccgacctccccg 421
                ||||||||||||||||||||
Sbjct: 22421983 cgccgtccccgacctccccg 22421964
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>gb|AC092153.4| Homo sapiens BAC clone RP11-252K7 from 2, complete sequence
          Length = 150641

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   tcctccctttcctgtcccat 310
             ||||||||||||||||||||
Sbjct: 73921 tcctccctttcctgtcccat 73902
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>gb|AC092093.34| Mus musculus strain C57BL/6J chromosome 10 clone rp23-168o8, complete
              sequence
          Length = 200124

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 281    ctcctcccgctcctccctttcctg 304
              ||||||| ||||||||||||||||
Sbjct: 114419 ctcctcctgctcctccctttcctg 114396
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 181     ctccgccgcaagaatccgcggcct 204
               ||||||||| ||||||||||||||
Sbjct: 4842772 ctccgccgctagaatccgcggcct 4842749
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>gb|AC022898.11| Homo sapiens chromosome 15, clone RP11-554D20, complete sequence
          Length = 200380

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 281   ctcctcccgctcctccctttcctg 304
             |||||||| |||||||||||||||
Sbjct: 24213 ctcctccctctcctccctttcctg 24190
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>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0406F06
          Length = 144533

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   cgccgtccccgacctccccg 421
             ||||||||||||||||||||
Sbjct: 83050 cgccgtccccgacctccccg 83031
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>dbj|AK072020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104C21, full
            insert sequence
          Length = 1807

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  cgccgtccccgacctccccg 421
            ||||||||||||||||||||
Sbjct: 1004 cgccgtccccgacctccccg 985
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 357    cggcggcgtgggcctcgcccaactccaccttc 388
              ||||||||| ||||||||||| | ||||||||
Sbjct: 171726 cggcggcgtcggcctcgcccagccccaccttc 171757
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>gb|AC113058.6| Mus musculus chromosome 6, clone RP23-253C24, complete sequence
          Length = 248761

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   attcccaagccccgattcacaccc 129
             |||||||||||| |||||||||||
Sbjct: 70438 attcccaagccctgattcacaccc 70415
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    gctcctcccgctcctccctt 299
              ||||||||||||||||||||
Sbjct: 580548 gctcctcccgctcctccctt 580567
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>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
             sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 281   ctcctcccgctcctccctttcctg 304
             ||||||| ||||||||||||||||
Sbjct: 23069 ctcctcctgctcctccctttcctg 23046


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,727,507
Number of Sequences: 3902068
Number of extensions: 2727507
Number of successful extensions: 64594
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63322
Number of HSP's gapped (non-prelim): 1272
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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