ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl21b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 4e-75
2gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome... 194 2e-46
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
4gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
5ref|XM_476089.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
6dbj|AK121381.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
7gb|AF448724.1| Sinorhizobium meliloti phage PBC5, complete genome 46 0.097
8ref|XM_538534.2| PREDICTED: Canis familiaris similar to germ cel... 46 0.097
9gb|U81378.1|LEU81378 Lycopersicon esculentum disease resistance ... 44 0.39
10ref|NM_205418.1| Gallus gallus acetylcholinesterase (ACHE), mRNA 42 1.5
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
13dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
14dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17dbj|AK110959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
18gb|U03472.1|GGU03472 Gallus gallus acetylcholinesterase mRNA, co... 42 1.5
19gb|AC114585.19| Mus musculus chromosome 14, clone RP23-296J16, c... 40 6.0
20gb|AC118588.6| Mus musculus chromosome 15, clone RP24-576D3, com... 40 6.0
21ref|NM_197815.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.0
22ref|NM_191268.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
23ref|XM_478020.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
24gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
25gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
26gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, comp... 40 6.0
27ref|XM_676388.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.0
28gb|AY252634.1| Gerridae sp. WCW-Wellsboro 28S ribosomal RNA gene... 40 6.0
29gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 6.0
30emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 i... 40 6.0
31gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosom... 40 6.0
32gb|AC125201.4| Mus musculus BAC clone RP23-224O3 from 14, comple... 40 6.0
33gb|AC005008.2| Homo sapiens BAC clone GS1-52G5 from 7, complete ... 40 6.0
34gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, compl... 40 6.0
35emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on ch... 40 6.0
36gb|AC162365.5| Mus musculus chromosome 19, clone RP23-75P11, com... 40 6.0
37gb|AC153791.2| Mus musculus chromosome 15, clone RP24-269A21, co... 40 6.0
38ref|XM_965182.1| PREDICTED: Tribolium castaneum similar to CG908... 40 6.0
39emb|AL833788.9| Mouse DNA sequence from clone RP23-99E6 on chrom... 40 6.0
40gb|AE014176.1| Mus musculus piebald deletion region section 4 of... 40 6.0
41gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.0
42gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen... 40 6.0
43gb|AC159577.3| Macropus eugenii clone ME_KBa-436J11, complete se... 40 6.0
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
45dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
46dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
47dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
48dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
49dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
50gb|AY648147.1| Trepobates subnitidus 28S ribosomal RNA gene, par... 40 6.0
51dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 6.0
52dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
53dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
54dbj|AK111322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
55gb|AC147533.3| Macropus eugenii clone ME_KBa-311C4, complete seq... 40 6.0
56emb|AL137100.4|CNS01DWC Human chromosome 14 DNA sequence BAC R-1... 40 6.0
57emb|AL122125.4|CNS01DT0 Human chromosome 14 DNA sequence BAC R-1... 40 6.0
58gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.0
59gb|AC113075.9| Mus musculus chromosome 19, clone RP23-278F24, co... 40 6.0
60gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
61gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
62gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0 
>dbj|AK066463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F17, full
           insert sequence
          Length = 3421

 Score =  289 bits (146), Expect = 4e-75
 Identities = 224/250 (89%)
 Strand = Plus / Plus

                                                                       
Query: 196 atggaaagtggcatccagatgaatcgaacagacctgaaattgatgatgctcctgttttta 255
           ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| |
Sbjct: 217 atggaaagtggcatccacatgaatcgtacagacctgaaattgatgatgcccctgttttca 276

                                                                       
Query: 256 ctccaaccgaggaggaattcaaagatgcaattggatacattactagcattcgtcctcaag 315
           ||||||| || ||||| || |||||| ||||| |||| ||||| ||||||||||| ||||
Sbjct: 277 ctccaacggaagaggagtttaaagatccaattagatatattacgagcattcgtccccaag 336

                                                                       
Query: 316 cagaaaaatatggaatttgtcgtattgttccaccatcttcttggagaccaccatgtcctc 375
           ||||||| |||||||||||||||||||||||||||||||||||| |||| || ||| |||
Sbjct: 337 cagaaaagtatggaatttgtcgtattgttccaccatcttcttggcgaccgccttgttctc 396

                                                                       
Query: 376 taaaggagaagagcttttggaactgtacagagtttaacacccgagttcaacaagttgaca 435
           | |||||||||| ||| ||| | ||||||||||| || ||||| ||||||||||||||||
Sbjct: 397 tgaaggagaagaacttctgggaatgtacagagttcaatacccgtgttcaacaagttgaca 456

                     
Query: 436 agcttcaaaa 445
           ||||||||||
Sbjct: 457 agcttcaaaa 466
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>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01,
              complete sequence
          Length = 142752

 Score =  194 bits (98), Expect = 2e-46
 Identities = 152/170 (89%)
 Strand = Plus / Minus

                                                                          
Query: 276    aaagatgcaattggatacattactagcattcgtcctcaagcagaaaaatatggaatttgt 335
              |||||| ||||| |||| ||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 128113 aaagatccaattagatatattacgagcattcgtccccaagcagaaaagtatggaatttgt 128054

                                                                          
Query: 336    cgtattgttccaccatcttcttggagaccaccatgtcctctaaaggagaagagcttttgg 395
              |||||||||||||||||||||||| |||| || ||| |||| |||||||||| ||| |||
Sbjct: 128053 cgtattgttccaccatcttcttggcgaccgccttgttctctgaaggagaagaacttctgg 127994

                                                                
Query: 396    aactgtacagagtttaacacccgagttcaacaagttgacaagcttcaaaa 445
               | ||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 127993 gaatgtacagagttcaatacccgtgttcaacaagttgacaagcttcaaaa 127944



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                          
Query: 189    cagacatatggaaagtggcatccagatgaatcgaacagacctgaaattgatgatgctcct 248
              |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |||
Sbjct: 128285 cagacaaatggaaagtggcatccacatgaatcgtacagacctgaaattgatgatgcccct 128226

                            
Query: 249    gtttttactccaac 262
              ||||| ||||||||
Sbjct: 128225 gttttcactccaac 128212
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  194 bits (98), Expect = 2e-46
 Identities = 152/170 (89%)
 Strand = Plus / Minus

                                                                            
Query: 276      aaagatgcaattggatacattactagcattcgtcctcaagcagaaaaatatggaatttgt 335
                |||||| ||||| |||| ||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 13444650 aaagatccaattagatatattacgagcattcgtccccaagcagaaaagtatggaatttgt 13444591

                                                                            
Query: 336      cgtattgttccaccatcttcttggagaccaccatgtcctctaaaggagaagagcttttgg 395
                |||||||||||||||||||||||| |||| || ||| |||| |||||||||| ||| |||
Sbjct: 13444590 cgtattgttccaccatcttcttggcgaccgccttgttctctgaaggagaagaacttctgg 13444531

                                                                  
Query: 396      aactgtacagagtttaacacccgagttcaacaagttgacaagcttcaaaa 445
                 | ||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 13444530 gaatgtacagagttcaatacccgtgttcaacaagttgacaagcttcaaaa 13444481



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                            
Query: 189      cagacatatggaaagtggcatccagatgaatcgaacagacctgaaattgatgatgctcct 248
                |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |||
Sbjct: 13444822 cagacaaatggaaagtggcatccacatgaatcgtacagacctgaaattgatgatgcccct 13444763

                              
Query: 249      gtttttactccaac 262
                ||||| ||||||||
Sbjct: 13444762 gttttcactccaac 13444749



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 323     atatggaatttgtcgtattgttccaccatcttcttgga 360
               |||||| ||||| |||||||| ||||||||||||||||
Sbjct: 5859676 atatggtatttgccgtattgtcccaccatcttcttgga 5859713



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 82       gggaggaggagggcggcggc 101
                ||||||||||||||||||||
Sbjct: 28814723 gggaggaggagggcggcggc 28814704
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>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07,
             complete sequence
          Length = 114135

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 323   atatggaatttgtcgtattgttccaccatcttcttgga 360
             |||||| ||||| |||||||| ||||||||||||||||
Sbjct: 66440 atatggtatttgccgtattgtcccaccatcttcttgga 66477
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>ref|XM_476089.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3717

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 323 atatggaatttgtcgtattgttccaccatcttcttgga 360
           |||||| ||||| |||||||| ||||||||||||||||
Sbjct: 540 atatggtatttgccgtattgtcccaccatcttcttgga 577



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 235 ttgatgatgctcctgtttttactccaaccgaggaggaatt 274
           ||||||| |||||||||||   |||||| |||||||||||
Sbjct: 452 ttgatgaggctcctgttttctatccaacagaggaggaatt 491
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>dbj|AK121381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H13, full
           insert sequence
          Length = 4316

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 323 atatggaatttgtcgtattgttccaccatcttcttgga 360
           |||||| ||||| |||||||| ||||||||||||||||
Sbjct: 739 atatggtatttgccgtattgtcccaccatcttcttgga 776



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 235 ttgatgatgctcctgtttttactccaaccgaggaggaatt 274
           ||||||| |||||||||||   |||||| |||||||||||
Sbjct: 651 ttgatgaggctcctgttttctatccaacagaggaggaatt 690
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>gb|AF448724.1| Sinorhizobium meliloti phage PBC5, complete genome
          Length = 57416

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 41    ctcgcccgccgcgcccatggtttcctcgccc 71
             |||| ||||||||| ||||||||||||||||
Sbjct: 35429 ctcggccgccgcgcgcatggtttcctcgccc 35459
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>ref|XM_538534.2| PREDICTED: Canis familiaris similar to germ cell-less protein,
           transcript variant 1 (LOC481414), mRNA
          Length = 2931

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 152 agcctcgccggagccggcttccgcggccggg 182
           |||| |||||||||||||||||| |||||||
Sbjct: 48  agccccgccggagccggcttccggggccggg 78
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>gb|U81378.1|LEU81378 Lycopersicon esculentum disease resistance gene homolog Mi-copy2
           gene, complete cds; resistance gene pseudogene, complete
           sequence; disease resistance gene homolog Mi-copy1 gene,
           complete cds; and unknown gene
          Length = 51953

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 322 aatatggaatttgtcgtattgttccaccatcttcttggagaccacc 367
           |||||||| | || ||||||||||| || ||||| |||||||||||
Sbjct: 691 aatatggagtatgccgtattgttcctccctcttcctggagaccacc 646
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>ref|NM_205418.1| Gallus gallus acetylcholinesterase (ACHE), mRNA
          Length = 4536

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 81  agggaggaggagggcggcggc 101
           |||||||||||||||||||||
Sbjct: 830 agggaggaggagggcggcggc 850
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 82      gggaggaggagggcggcggcc 102
               |||||||||||||||||||||
Sbjct: 5045256 gggaggaggagggcggcggcc 5045236



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 82       gggaggaggagggcggcggc 101
                ||||||||||||||||||||
Sbjct: 16676914 gggaggaggagggcggcggc 16676933
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 82      gggaggaggagggcggcggcc 102
               |||||||||||||||||||||
Sbjct: 6474136 gggaggaggagggcggcggcc 6474116
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>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1006_D05
          Length = 128178

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     gggaggaggagggcggcggcc 102
              |||||||||||||||||||||
Sbjct: 116129 gggaggaggagggcggcggcc 116109
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>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    gggaggaggagggcggcggcc 102
             |||||||||||||||||||||
Sbjct: 86945 gggaggaggagggcggcggcc 86925
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>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1118_E12
          Length = 119691

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 82   gggaggaggagggcggcggcc 102
            |||||||||||||||||||||
Sbjct: 1423 gggaggaggagggcggcggcc 1403
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>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1307A11
          Length = 131538

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    gggaggaggagggcggcggcc 102
             |||||||||||||||||||||
Sbjct: 34749 gggaggaggagggcggcggcc 34729
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>dbj|AK110959.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A10, full
            insert sequence
          Length = 1334

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 82   gggaggaggagggcggcggcc 102
            |||||||||||||||||||||
Sbjct: 1042 gggaggaggagggcggcggcc 1022
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>gb|U03472.1|GGU03472 Gallus gallus acetylcholinesterase mRNA, complete cds
          Length = 4536

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 81  agggaggaggagggcggcggc 101
           |||||||||||||||||||||
Sbjct: 830 agggaggaggagggcggcggc 850
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>gb|AC114585.19| Mus musculus chromosome 14, clone RP23-296J16, complete sequence
          Length = 192819

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    cagaaaaatatggaatttgt 335
              ||||||||||||||||||||
Sbjct: 192165 cagaaaaatatggaatttgt 192146
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>gb|AC118588.6| Mus musculus chromosome 15, clone RP24-576D3, complete sequence
          Length = 175210

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   aagcagaaaaatatggaatt 332
             ||||||||||||||||||||
Sbjct: 56936 aagcagaaaaatatggaatt 56955
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>ref|NM_197815.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0095C07.13), mRNA
          Length = 333

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ggaggaggagggcggcggcc 102
           ||||||||||||||||||||
Sbjct: 196 ggaggaggagggcggcggcc 215
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>ref|NM_191268.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1320

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  gggaggaggagggcggcggc 101
           ||||||||||||||||||||
Sbjct: 399 gggaggaggagggcggcggc 418
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>ref|XM_478020.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 234

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  gggaggaggagggcggcggc 101
           ||||||||||||||||||||
Sbjct: 94  gggaggaggagggcggcggc 113
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>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
           OSJNBb0122P24, complete sequence
          Length = 136104

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  ggaggaggagggcggcggcc 102
           ||||||||||||||||||||
Sbjct: 205 ggaggaggagggcggcggcc 186
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>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0084F23, complete sequence
          Length = 89829

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    ggaggaggagggcggcggcc 102
             ||||||||||||||||||||
Sbjct: 86248 ggaggaggagggcggcggcc 86229
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>gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, complete sequence
          Length = 200913

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    agcagaaaaatatggaattt 333
              ||||||||||||||||||||
Sbjct: 118198 agcagaaaaatatggaattt 118179
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>ref|XM_676388.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8211.2), mRNA
          Length = 5154

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 tccaaccgaggaggaattca 276
           ||||||||||||||||||||
Sbjct: 237 tccaaccgaggaggaattca 256
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>gb|AY252634.1| Gerridae sp. WCW-Wellsboro 28S ribosomal RNA gene, partial
          sequence
          Length = 517

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 72 gcctcccctagggaggaggagggc 95
          |||| |||||||||||||||||||
Sbjct: 74 gccttccctagggaggaggagggc 97
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     atagcttcttctgaccacca 34
              ||||||||||||||||||||
Sbjct: 847866 atagcttcttctgaccacca 847847
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>emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 in linkage group 9,
             complete sequence
          Length = 210207

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   catgtcctctaaaggagaag 386
             ||||||||||||||||||||
Sbjct: 93953 catgtcctctaaaggagaag 93934
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>gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosome 15, complete
           sequence
          Length = 182619

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 313 aagcagaaaaatatggaatt 332
           ||||||||||||||||||||
Sbjct: 21  aagcagaaaaatatggaatt 2
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>gb|AC125201.4| Mus musculus BAC clone RP23-224O3 from 14, complete sequence
          Length = 189542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 316  cagaaaaatatggaatttgt 335
            ||||||||||||||||||||
Sbjct: 4248 cagaaaaatatggaatttgt 4229
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>gb|AC005008.2| Homo sapiens BAC clone GS1-52G5 from 7, complete sequence
          Length = 91634

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   agcagaaaaatatggaattt 333
             ||||||||||||||||||||
Sbjct: 59171 agcagaaaaatatggaattt 59152
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>gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, complete sequence
          Length = 173444

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    agcagaaaaatatggaattt 333
              ||||||||||||||||||||
Sbjct: 154135 agcagaaaaatatggaattt 154116
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>emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on chromosome 13 Contains the
              3' end of the ATP11A gene for ATPase Class VI type 11A, the
              5' end of the MCF2L gene for a MCF.2 cell line derived
              transforming sequence-like gene, a novel gene and eight CpG
              islands, complete sequence
          Length = 170928

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     ggaggagggcggcggccctc 105
              ||||||||||||||||||||
Sbjct: 165655 ggaggagggcggcggccctc 165674
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>gb|AC162365.5| Mus musculus chromosome 19, clone RP23-75P11, complete sequence
          Length = 157286

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    ttccaccatcttcttggaga 362
              ||||||||||||||||||||
Sbjct: 125333 ttccaccatcttcttggaga 125352
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>gb|AC153791.2| Mus musculus chromosome 15, clone RP24-269A21, complete sequence
          Length = 144965

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    aagcagaaaaatatggaatt 332
              ||||||||||||||||||||
Sbjct: 138275 aagcagaaaaatatggaatt 138256
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>ref|XM_965182.1| PREDICTED: Tribolium castaneum similar to CG9088-PA, isoform A
           (LOC658825), mRNA
          Length = 6585

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 258 ccaaccgaggaggaattcaa 277
           ||||||||||||||||||||
Sbjct: 139 ccaaccgaggaggaattcaa 158
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>emb|AL833788.9| Mouse DNA sequence from clone RP23-99E6 on chromosome X, complete
            sequence
          Length = 167868

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccaccatcttcttggagacc 364
            ||||||||||||||||||||
Sbjct: 7958 ccaccatcttcttggagacc 7977
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>gb|AE014176.1| Mus musculus piebald deletion region section 4 of 11 of the complete
             sequence
          Length = 395229

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   cagaaaaatatggaatttgt 335
             ||||||||||||||||||||
Sbjct: 89411 cagaaaaatatggaatttgt 89392
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 159     ccggagccggcttccgcggc 178
               ||||||||||||||||||||
Sbjct: 4560340 ccggagccggcttccgcggc 4560321
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>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
             sequence
          Length = 187707

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    ggaggaggagggcggcggcc 102
             ||||||||||||||||||||
Sbjct: 27100 ggaggaggagggcggcggcc 27081
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>gb|AC159577.3| Macropus eugenii clone ME_KBa-436J11, complete sequence
          Length = 23152

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  atagcttcttctgaccacca 34
           ||||||||||||||||||||
Sbjct: 772 atagcttcttctgaccacca 753
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 83      ggaggaggagggcggcggcc 102
               ||||||||||||||||||||
Sbjct: 7470593 ggaggaggagggcggcggcc 7470612
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       ggaggaggagggcggcggcc 102
                ||||||||||||||||||||
Sbjct: 22022556 ggaggaggagggcggcggcc 22022537
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 82       gggaggaggagggcggcggc 101
                ||||||||||||||||||||
Sbjct: 27619409 gggaggaggagggcggcggc 27619428
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 82       gggaggaggagggcggcggc 101
                ||||||||||||||||||||
Sbjct: 31628404 gggaggaggagggcggcggc 31628385
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>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503C12
          Length = 147180

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    gggaggaggagggcggcggc 101
             ||||||||||||||||||||
Sbjct: 42136 gggaggaggagggcggcggc 42117
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>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435B05
          Length = 150997

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     gggaggaggagggcggcggc 101
              ||||||||||||||||||||
Sbjct: 141427 gggaggaggagggcggcggc 141408
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>gb|AY648147.1| Trepobates subnitidus 28S ribosomal RNA gene, partial sequence
          Length = 558

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 72  gcctcccctagggaggaggagggc 95
           |||| |||||||||||||||||||
Sbjct: 467 gccttccctagggaggaggagggc 444
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 164     gccggcttccgcggccgggc 183
               ||||||||||||||||||||
Sbjct: 1572250 gccggcttccgcggccgggc 1572269
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>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0778G11
          Length = 59211

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gggaggaggagggcggcggc 101
             ||||||||||||||||||||
Sbjct: 23592 gggaggaggagggcggcggc 23611
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>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1115_C05
          Length = 146585

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gggaggaggagggcggcggc 101
             ||||||||||||||||||||
Sbjct: 16826 gggaggaggagggcggcggc 16845
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>dbj|AK111322.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-D06, full
           insert sequence
          Length = 692

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  ggaggaggagggcggcggcc 102
           ||||||||||||||||||||
Sbjct: 61  ggaggaggagggcggcggcc 42
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>gb|AC147533.3| Macropus eugenii clone ME_KBa-311C4, complete sequence
          Length = 153357

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     atagcttcttctgaccacca 34
              ||||||||||||||||||||
Sbjct: 150872 atagcttcttctgaccacca 150853
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>emb|AL137100.4|CNS01DWC Human chromosome 14 DNA sequence BAC R-108M12 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166486

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   accaccatgtcctctaaagg 381
             ||||||||||||||||||||
Sbjct: 51312 accaccatgtcctctaaagg 51331
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>emb|AL122125.4|CNS01DT0 Human chromosome 14 DNA sequence BAC R-102G14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188849

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   gaggaggaattcaaagatgc 283
             ||||||||||||||||||||
Sbjct: 52867 gaggaggaattcaaagatgc 52848
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>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940123D9, complete sequence
          Length = 121336

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     ggaggaggagggcggcggcc 102
              ||||||||||||||||||||
Sbjct: 117422 ggaggaggagggcggcggcc 117441
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>gb|AC113075.9| Mus musculus chromosome 19, clone RP23-278F24, complete sequence
          Length = 171837

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   ttccaccatcttcttggaga 362
             ||||||||||||||||||||
Sbjct: 98461 ttccaccatcttcttggaga 98442
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       ggaggaggagggcggcggcc 102
                ||||||||||||||||||||
Sbjct: 22034219 ggaggaggagggcggcggcc 22034200
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 83      ggaggaggagggcggcggcc 102
               ||||||||||||||||||||
Sbjct: 7540679 ggaggaggagggcggcggcc 7540698
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>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035N21, complete sequence
          Length = 128331

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gggaggaggagggcggcggc 101
             ||||||||||||||||||||
Sbjct: 58744 gggaggaggagggcggcggc 58763


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,607,502
Number of Sequences: 3902068
Number of extensions: 4607502
Number of successful extensions: 91110
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90346
Number of HSP's gapped (non-prelim): 764
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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