ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl21b10 |
|---|---|
| Clone Library Name | barley_pub |
>3BP1_MOUSE (P55194) SH3 domain-binding protein 1 (3BP-1)| Length = 601 Score = 35.4 bits (80), Expect = 0.081 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 11/74 (14%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQN-------PSPRNPRLPP----ASRPNTPTPRL 149 ER PK +P+ + ETAA ++ P+P P +PP ++R + P P L Sbjct: 445 ERTEADLPKPTSPKVSRNPTETAASAEDMTRKTKRPAPARPTMPPPQPSSTRSSPPAPSL 504 Query: 150 AAGGLDLGRDRRAP 191 G + G + P Sbjct: 505 PPGSVSPGTPQALP 518
>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Brain cyclic nucleotide gated channel 3) (BCNG-3) Length = 1186 Score = 33.1 bits (74), Expect = 0.40 Identities = 17/35 (48%), Positives = 24/35 (68%) Frame = +3 Query: 54 GQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAG 158 G+EE A G+Q+PS R+ RL P +P+P +AAG Sbjct: 32 GEEEGAGGRQDPSRRSIRLRPLP---SPSPSVAAG 63
>SVIL_HUMAN (O95425) Supervillin (Archvillin) (p205/p250)| Length = 2214 Score = 33.1 bits (74), Expect = 0.40 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPR 146 R+P+ AH A ++PS +P+L P +RP+T P+ Sbjct: 244 RSPKHAHSSSLQQAASRSPSFGDPQLSPEARPSTGKPK 281
>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1203 Score = 32.7 bits (73), Expect = 0.53 Identities = 17/37 (45%), Positives = 24/37 (64%) Frame = +3 Query: 57 QEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLD 167 +EE A G+Q+PS R+ RL P +P+P AAGG + Sbjct: 33 EEEGAGGRQDPSRRSIRLRPLP---SPSPSAAAGGTE 66
>CSP_PLABE (P06915) Circumsporozoite protein precursor (CS)| Length = 339 Score = 32.7 bits (73), Expect = 0.53 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 P A P P + + +P+P N PP PN P P Sbjct: 160 PNANDPAPPNANDPAPPNANDPAPPNANDPPPPNPNDPAP 199 Score = 30.8 bits (68), Expect = 2.0 Identities = 13/47 (27%), Positives = 19/47 (40%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 E+ + + P P + + +P P NP PP PN P P Sbjct: 81 EKIERNNKLKQPPPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPP 127
>HMGN3_CHICK (Q5ZIR5) High mobility group nucleosome-binding domain-containing| protein 3 Length = 98 Score = 32.3 bits (72), Expect = 0.69 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPR 146 PK ++P A G++ KQ P+ R+ RL P P P+ Sbjct: 2 PKRKSPEGAEGKDAAKVTKQEPTRRSARLSAKPAPPKPEPK 42
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 32.3 bits (72), Expect = 0.69 Identities = 18/53 (33%), Positives = 21/53 (39%) Frame = +3 Query: 12 NQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDL 170 N P PRP+ + P P LPP+S N TPRL L L Sbjct: 289 NNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSL 341
>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)| Length = 1430 Score = 32.0 bits (71), Expect = 0.90 Identities = 18/63 (28%), Positives = 24/63 (38%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRR 185 + + T + P P G E P P +P+ PP P P P A GL Sbjct: 1241 QGSPTPASKKVPLPGPGSPEVKRAHGTPPPVSPKPPPP--PTAPKPAKALAGLQSSSATP 1298 Query: 186 APV 194 +PV Sbjct: 1299 SPV 1301
>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 32.0 bits (71), Expect = 0.90 Identities = 18/63 (28%), Positives = 24/63 (38%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRR 185 + + T + P P G E P P +P+ PP P P P A GL Sbjct: 1242 QGSPTPASKKVPLPGPGSPEVKRAHGTPPPVSPKPPPP--PTAPKPAKALAGLQSSSATP 1299 Query: 186 APV 194 +PV Sbjct: 1300 SPV 1302
>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)| (Proline-rich synapse associated protein 2) (ProSAP2) (SPANK-2) Length = 1815 Score = 32.0 bits (71), Expect = 0.90 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +3 Query: 69 AAGKQNPSPRNPRLPPASRPNTPTPRLAAGG 161 AA + P P +P L PA P P PR A GG Sbjct: 12 AAPAEPPEPLSPALAPAPAPPGPLPRSAVGG 42
>PIV6_ADE41 (P16139) Minor capsid protein 6 precursor (Minor capsid protein VI)| [Contains: Protease cofactor] Length = 266 Score = 32.0 bits (71), Expect = 0.90 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +3 Query: 18 TEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRP--NTPTPRLAA 155 T P RP +G+E+T + P P P +PP P T PRLAA Sbjct: 182 TRPIGSMARPVYGKEKTPVTLELPPPA-PTVPPMPTPTLGTNVPRLAA 228
>PSAD_NICSY (P29302) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 204 Score = 32.0 bits (71), Expect = 0.90 Identities = 23/60 (38%), Positives = 28/60 (46%) Frame = +3 Query: 15 QTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRRAPV 194 Q + APRP E AA K+ +P PP PNTP+P GG G R+A V Sbjct: 34 QLKSTVSAPRPIRAMAEEAATKEAEAPVG-FTPPQLDPNTPSP--IFGGSTGGLLRKAQV 90
>CSP_PLABA (P23093) Circumsporozoite protein precursor (CS)| Length = 347 Score = 32.0 bits (71), Expect = 0.90 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 P A P P + + +P+P N PP PN P P Sbjct: 168 PNANDPPPPNANDPPPPNPNDPAPPNANDPPPPNPNDPAP 207 Score = 32.0 bits (71), Expect = 0.90 Identities = 13/40 (32%), Positives = 16/40 (40%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 P A P P + + +P P N PP PN P P Sbjct: 152 PNANDPAPPNANDPAPPNANDPPPPNANDPPPPNPNDPAP 191 Score = 31.2 bits (69), Expect = 1.5 Identities = 13/40 (32%), Positives = 16/40 (40%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 P P P + + +P P NP PP PN P P Sbjct: 96 PNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPP 135 Score = 30.0 bits (66), Expect = 3.4 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 ER N+ + + P P + + +P P NP PP PN P P Sbjct: 84 ERNNKLK---QPPPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPP 127 Score = 29.3 bits (64), Expect = 5.8 Identities = 12/40 (30%), Positives = 16/40 (40%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 P A P P + + +P+P N PP N P P Sbjct: 144 PNANDPAPPNANDPAPPNANDPAPPNANDPPPPNANDPPP 183
>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1198 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = +3 Query: 54 GQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAG 158 G+EE A G Q+PS R+ RL P +P+P +AAG Sbjct: 32 GEEEGAGGLQDPSRRSIRLRPLP---SPSPSVAAG 63
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 31.6 bits (70), Expect = 1.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +3 Query: 21 EPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGL 164 +P AR PR + +A P PR P A RP P P + G + Sbjct: 169 KPAARTPRVGNNPFSSAQPVDRPIPRPVPRPGAPRPGAPRPGASPGNM 216
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/62 (29%), Positives = 24/62 (38%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRR 185 + + T + P P G E P P +P+ PP P P P A GL G Sbjct: 1240 QGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPP--PTAPKPVKAVAGLPSGSAGP 1297 Query: 186 AP 191 +P Sbjct: 1298 SP 1299
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 31.6 bits (70), Expect = 1.2 Identities = 19/48 (39%), Positives = 21/48 (43%) Frame = +3 Query: 9 ANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLA 152 A T P P P +TAA N P +P SRP PTPR A Sbjct: 128 APPTRPANPTPTPTSSPPKTAARPINAPISRPAIP--SRPTAPTPRSA 173
>IF39_MOUSE (Q8JZQ9) Eukaryotic translation initiation factor 3 subunit 9| (eIF-3 eta) (eIF3 p116) Length = 803 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3 Query: 21 EPKARAPRPAHGQEETAAG-KQNPSPRNPRLPPASRPNTPTPRLAAG 158 EP+ RA A +EETA +P+P++ P+ P+ P A G Sbjct: 57 EPEVRAKPAAQSEEETATSPAASPTPQSAERSPSQEPSAPGKAEAVG 103
>HMGN3_RAT (Q66H40) High mobility group nucleosome-binding domain-containing| protein 3 Length = 95 Score = 30.8 bits (68), Expect = 2.0 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPR 146 PK ++P A G++ KQ P+ R+ RL P P P+ Sbjct: 2 PKRKSPENAEGKDGAKLTKQEPTRRSARLSAKPVPPKPEPK 42
>HMGN3_HUMAN (Q15651) High mobility group nucleosome-binding domain-containing| protein 3 (Thyroid receptor interacting protein 7) (TRIP7) Length = 99 Score = 30.8 bits (68), Expect = 2.0 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPR 146 PK ++P G++ + KQ P+ R+ RL P P P+ Sbjct: 2 PKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPK 42
>HMGN3_BOVIN (Q3ZBV4) High mobility group nucleosome-binding domain-containing| protein 3 Length = 100 Score = 30.8 bits (68), Expect = 2.0 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPR 146 PK ++P G++ + KQ P+ R+ RL P P P+ Sbjct: 2 PKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPK 42
>CNGB1_HUMAN (Q14028) Cyclic nucleotide-gated cation channel 4 (CNG channel 4)| (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel modulatory subunit) Length = 909 Score = 30.8 bits (68), Expect = 2.0 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 10/49 (20%) Frame = +3 Query: 27 KARAPRPAHGQEETAAGKQN----------PSPRNPRLPPASRPNTPTP 143 +A++ + G+E +AA Q+ P+PR P PP S P++P P Sbjct: 812 QAKSSQDVKGEEGSAAPDQHTHPKEAATDPPAPRTPPEPPGSPPSSPPP 860
>DDX51_MOUSE (Q6P9R1) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 639 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +3 Query: 15 QTEPKARAPRPAHGQEETAAGKQNPSP-RNPRLPPASRPNTPTPRL----AAGGLDLGRD 179 Q EP+ A E AAGK+ P R R+ ++ PN+ PR A +D GR Sbjct: 44 QREPELETTGTAGEGEAAAAGKRRRRPRRRRRVSGSATPNSEAPRAKRRKADKDVDAGRG 103 Query: 180 RRAP 191 AP Sbjct: 104 EEAP 107
>MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)| Length = 1324 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 ++N PK+ +P P+ ++T NPS P P+ P+TP+P Sbjct: 50 KSNNPNPKSPSPSPSP-PKKTPKLNPNPSSNLPARSPSPGPDTPSP 94
>SSP2_PLAYO (Q01443) Sporozoite surface protein 2 precursor| Length = 827 Score = 30.8 bits (68), Expect = 2.0 Identities = 13/46 (28%), Positives = 18/46 (39%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPT 140 +R N +PK P P + P+P P P PN P+ Sbjct: 398 KRRNPNKPKPNKPNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPS 443
>ROBO3_HUMAN (Q96MS0) Roundabout homolog 3 precursor (Roundabout-like protein 3)| Length = 1386 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 13/56 (23%) Frame = +3 Query: 3 ERANQTEPKAR-------------APRPAHGQEETAAGKQNPSPRNPRLPPASRPN 131 ER++ TEP + +P P++GQ+ TA PSP +P PP P+ Sbjct: 1119 ERSHLTEPSSSGGCLVTPSRRETPSPTPSYGQQSTAT--LTPSPPDPPQPPTDMPH 1172
>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3| (Elongin A3) (EloA3) (Transcription elongation factor B polypeptide 3C) Length = 546 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Frame = +3 Query: 12 NQTEPKARAPRPAHGQ--EETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRD-- 179 N T P++ + P H + T G+Q P PR+P P R PR+A RD Sbjct: 115 NATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREP--RAERKRPRMAPADSGPHRDPP 172 Query: 180 -RRAPV 194 R AP+ Sbjct: 173 TRTAPL 178
>NDST2_MOUSE (P52850) Bifunctional heparan sulfate| N-deacetylase/N-sulfotransferase 2 (EC 2.8.2.8) (Glucosaminyl N-deacetylase/N-sulfotransferase 2) (NDST-2) (N-heparan sulfate sulfotransferase 2) (N-HSST 2) (Mndns) [Includes: Heparan sulfate N-deacetylas Length = 883 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 18 TEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTP 137 T PKA+ P P + +++G P P P +PP RP P Sbjct: 40 TSPKAKEPLPLPLGDCSSSGAAGPGPARPPVPP--RPQRP 77
>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1821 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTP 137 R ++ + R PA + T G+Q P+PR P R TP Sbjct: 105 RPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALPRLGTP 148
>SPR1A_MOUSE (Q62266) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPR1| A) Length = 144 Score = 30.4 bits (67), Expect = 2.6 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 + P P H + + P P NP++P +P P P Sbjct: 51 KGPEPCHPKAPEPCHPKAPEPCNPKVPEPCQPKVPEP 87 Score = 30.0 bits (66), Expect = 3.4 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 +AP P H + + P P P++P +P P P Sbjct: 59 KAPEPCHPKAPEPCNPKVPEPCQPKVPEPCQPKVPEP 95
>ZN580_HUMAN (Q9UK33) Zinc finger protein 580 (LDL-induced EC protein)| Length = 172 Score = 30.4 bits (67), Expect = 2.6 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 39 PRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAG 158 PRP H + + P P+ P P A P++ TP AAG Sbjct: 6 PRPPHPRSSSPEAMDPPPPKAPPFPKAEGPSS-TPSSAAG 44
>BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) (Docking protein CAIR-1) Length = 575 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +3 Query: 45 PAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAG 158 P+ G +ET + PS RLPPA + P+L G Sbjct: 55 PSEGPKETPSSANGPSREGSRLPPAREGHPVYPQLRPG 92
>LRP2_HHV1F (P17589) Latency-related protein 2| Length = 107 Score = 30.0 bits (66), Expect = 3.4 Identities = 13/40 (32%), Positives = 16/40 (40%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 P R P P H + P+P +P P TPTP Sbjct: 4 PLPRTPTPTHPHSHAPPLPRTPTPAHPHSHAPPLPRTPTP 43
>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1| (PRAX-1) (Peripheral benzodiazepine receptor-interacting protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1) Length = 1857 Score = 30.0 bits (66), Expect = 3.4 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +3 Query: 24 PKARAP--RPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAG 158 P+ARAP + G + ++ Q+P+P + PP + P +P+ +A G Sbjct: 1096 PEARAPLASASPGPGDPSSPLQHPAPLGTQEPPGAPPASPSREMAKG 1142
>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)| Length = 963 Score = 30.0 bits (66), Expect = 3.4 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 39 PRPAHGQEETAAGKQNPSPRNPRLP--PASRPNTPTPRLAAGGLD 167 PR + + +Q P + R P P PNTP PR +GG D Sbjct: 225 PRVPYNPPQPNYTRQPTYPEDNRAPYKPTRSPNTPPPRQPSGGYD 269
>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 30.0 bits (66), Expect = 3.4 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +3 Query: 30 ARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGG 161 +RAP P ++ET + Q P+P+ R PP +P P + GG Sbjct: 75 SRAPPPPEERQETRS--QTPAPKPSRAPP-QQPQPPRMQTGRGG 115
>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa| protein) Length = 537 Score = 30.0 bits (66), Expect = 3.4 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = +3 Query: 3 ERANQTEPKAR-APRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 ++A + PK + AP P G T + P P+ PP + P P Sbjct: 25 KKAPEPAPKEKPAPTPKEGHAPTPKEEHAPPPKEEHAPPPKEEHAPAP 72
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 30.0 bits (66), Expect = 3.4 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 11/71 (15%) Frame = +3 Query: 12 NQTEPKARAPRPAHGQEETAAGKQN-------PSPRNPRLPP----ASRPNTPTPRLAAG 158 ++ P+ +P+ ETAA ++ P+P P +PP SR + P P L G Sbjct: 536 SEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPG 595 Query: 159 GLDLGRDRRAP 191 G + P Sbjct: 596 SGSPGTPQALP 606
>ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII subunit A2| (Elongin A2) (EloA2) (Transcription elongation factor B polypeptide 3B) Length = 753 Score = 30.0 bits (66), Expect = 3.4 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = +3 Query: 12 NQTEPKARAPRPAHGQ--EETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRR 185 N T P++ + P H + T G+Q P PR+ P R PR+A D GR R Sbjct: 115 NATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREP--RAERKCPRIAPA--DSGRYRA 170 Query: 186 AP 191 +P Sbjct: 171 SP 172
>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)| Length = 296 Score = 30.0 bits (66), Expect = 3.4 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPS-PRNPRLPPASRPNTP 137 P PRP G T +Q P NP+ PP RP P Sbjct: 257 PTGPQPRPTQGPHPTGGPQQTPPLAGNPQGPPPGRPQGP 295 Score = 29.3 bits (64), Expect = 5.8 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 10/66 (15%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQ----------NPSPRNPRLPPASRPNTPTPRLAAGGLDLG 173 P PRP G T +Q P PR P+ PP P P PR G G Sbjct: 215 PTGPQPRPTQGPPPTGGPQQRPPQGPPPPGGPQPRPPQGPPP--PTGPQPRPTQGPHPTG 272 Query: 174 RDRRAP 191 ++ P Sbjct: 273 GPQQTP 278
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 29.6 bits (65), Expect = 4.4 Identities = 11/40 (27%), Positives = 17/40 (42%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 P + P P +E + P+P P+ P + P P P Sbjct: 469 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 508 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/42 (28%), Positives = 18/42 (42%) Frame = +3 Query: 18 TEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 T + P P +E + P+P P+ P + P TP P Sbjct: 811 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPP 852
>PERT_BORPA (P24328) Pertactin precursor (P.95) [Contains: Outer membrane| protein P.70] Length = 922 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = +3 Query: 24 PKARAPRPAHGQE---ETAAGKQNPSPRNPRLPPASRPNTPTPRLAAG 158 P A P P G + + Q P P P PP +P P P+ AG Sbjct: 568 PPAPKPAPQPGPQPGPQPPQPPQPPQPPQPPQPPQRQPEAPAPQPPAG 615
>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1054 Score = 29.6 bits (65), Expect = 4.4 Identities = 12/45 (26%), Positives = 18/45 (40%) Frame = +3 Query: 9 ANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 A + P + P P +E + P P P+ P + P P P Sbjct: 356 AKEPPPTTKKPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 400
>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)| Length = 320 Score = 29.6 bits (65), Expect = 4.4 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Frame = +3 Query: 21 EPKARAPRPAHGQEET-AAGKQNPSPRNPRLPPASRPN-----TPTPRLAAGG 161 +P A+A PAHG + Q P P PR P + P TP + AGG Sbjct: 118 QPPAQAKGPAHGLHASHVLQPQPPPPLQPRAVPPAAPRRCEAAPATPGVPAGG 170
>NDST2_HUMAN (P52849) Bifunctional heparan sulfate| N-deacetylase/N-sulfotransferase 2 (EC 2.8.2.8) (Glucosaminyl N-deacetylase/N-sulfotransferase 2) (NDST-2) (N-heparan sulfate sulfotransferase 2) (N-HSST 2) [Includes: Heparan sulfate N-deacetylase 2 (EC Length = 883 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 18 TEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTP 137 T PKA+ P P + ++ G P P P +PP RP P Sbjct: 40 TSPKAKEPLPLPLGDCSSGGAAGPGPARPPVPP--RPPRP 77
>SPR1B_MOUSE (Q62267) Cornifin B (Small proline-rich protein 1B) (SPR1B) (SPR1| B) Length = 153 Score = 29.3 bits (64), Expect = 5.8 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRL 149 +AP P H + + P P +P+ P P P P L Sbjct: 84 KAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPKVPEPCL 122 Score = 28.9 bits (63), Expect = 7.6 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 +AP P H + + P P +P++P P P P Sbjct: 92 KAPEPCHPKAPEPCHPKAPEPCHPKVPEPCLPKAPEP 128 Score = 28.9 bits (63), Expect = 7.6 Identities = 11/37 (29%), Positives = 16/37 (43%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 +AP P H + + P P +P+ P P P P Sbjct: 76 KAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEP 112 Score = 28.9 bits (63), Expect = 7.6 Identities = 11/37 (29%), Positives = 16/37 (43%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 +AP P H + + P P +P+ P P P P Sbjct: 68 KAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEP 104 Score = 28.9 bits (63), Expect = 7.6 Identities = 11/37 (29%), Positives = 16/37 (43%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 +AP P H + + P P +P+ P P P P Sbjct: 60 KAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEP 96 Score = 28.9 bits (63), Expect = 7.6 Identities = 11/37 (29%), Positives = 16/37 (43%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 +AP P H + + P P +P+ P P P P Sbjct: 52 KAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEP 88
>PROQ_YERPE (Q8ZFJ9) ProP effector| Length = 237 Score = 29.3 bits (64), Expect = 5.8 Identities = 21/61 (34%), Positives = 25/61 (40%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDR 182 E A RA + A +E A + P PR PR PA + P PR AG R Sbjct: 104 EEAKARVQAQRAEQQAKKREAAIAAGETPEPRRPR--PAGK--KPAPRREAGAAPENRKP 159 Query: 183 R 185 R Sbjct: 160 R 160
>IF2_ANASP (Q8YQJ1) Translation initiation factor IF-2| Length = 1039 Score = 29.3 bits (64), Expect = 5.8 Identities = 19/61 (31%), Positives = 24/61 (39%) Frame = +3 Query: 9 ANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRRA 188 A + EP+A++ PA E P P P P + P R A LDL A Sbjct: 162 APEAEPEAQSQAPAKIAVEKPEKSAQPRPGKPERQPKPQLVAPPSRPTAEKLDLSEITGA 221 Query: 189 P 191 P Sbjct: 222 P 222
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = +3 Query: 33 RAPRPAHGQEETAAGKQNPSPRNPRLPPAS--RPNTPTP 143 R P P +GQ + P PR PP +P TPTP Sbjct: 521 RPPTPTYGQPPSPPTFSPPPPRQIHSPPPPHWQPRTPTP 559
>US6NL_HUMAN (Q92738) USP6 N-terminal-like protein (Related to the N-terminus of| tre) (RN-tre) Length = 828 Score = 29.3 bits (64), Expect = 5.8 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +3 Query: 321 G*RASGAAQRRHDFMPHPQ 377 G R SGA RRH+ PHPQ Sbjct: 401 GRRESGAPHRRHEHSPHPQ 419
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 29.3 bits (64), Expect = 5.8 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +3 Query: 57 QEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRRA 188 +EE A G+Q+P R+ RL P P +P+P AA R A Sbjct: 33 EEEGAGGRQDPRRRSIRLRPLPSP-SPSPSAAAAAAGGAESRGA 75
>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2| Length = 924 Score = 29.3 bits (64), Expect = 5.8 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +3 Query: 21 EPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRRAP 191 +P R PR + +A P PR P P++ P++ +PR GG G R P Sbjct: 169 KPGGRPPRVGNNPFSSAQSVARPIPRPPAPRPSASPSSMSPR--PGGAVGGGGPRPP 223
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +3 Query: 81 QNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRRAP 191 Q P P+ P PPA P T T A G +RR P Sbjct: 27 QRPEPQQP--PPAPGPGTATASAATSAASPGPERRPP 61
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 29.3 bits (64), Expect = 5.8 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRRAP 191 PK AP+PA TA P P+ PA +P PR+A G R AP Sbjct: 137 PKPAAPKPAAQSSTTATPGSMP---RPQAKPAPKPGGRAPRVANNPFSSG-PRPAP 188
>PRAX_RAT (Q63425) Periaxin| Length = 1383 Score = 29.3 bits (64), Expect = 5.8 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSP 95 PK R PR Q E+A+G+ +PSP Sbjct: 1255 PKLRLPRVGFSQSESASGEGSPSP 1278
>IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2| Length = 989 Score = 29.3 bits (64), Expect = 5.8 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Frame = +3 Query: 9 ANQTEPKARAPRPAHGQEETAAGKQNPSPRNP---RLPPASRPNTPTPRLAAGGLDLGRD 179 A E + + RPA A +++ SPR+P R P S P PR A G D Sbjct: 300 AGAAEGEEKTRRPAKAAAPKAREERSESPRSPAPRRFTPVSPPRREAPRPAMRDRK-GED 358 Query: 180 RR 185 RR Sbjct: 359 RR 360
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 28.9 bits (63), Expect = 7.6 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Frame = +3 Query: 24 PKARAPRPAHGQE-----ETAAGKQNPSPR-----NPRLPPASRPNTP 137 P+ +APRP G +A G P PR +P PASRP P Sbjct: 215 PRPQAPRPGPGTAGGRPGSSAGGPPRPVPRPGPRPSPMNMPASRPTPP 262
>LAMBV_CHICK (Q01636) Laminin beta-1 chain variant (Laminin beta-1-2 chain)| (Fragment) Length = 198 Score = 28.9 bits (63), Expect = 7.6 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 7/66 (10%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQEETAAGKQNPSPR-----NPRLPPASRPNTP--TPRLAAGGL 164 R EP A P H + + +P R PR PP P+ P PR AA + Sbjct: 7 RGGGREPTPPATPPTHARPDPTRRHPDPESRAPPHARPRSPPPPAPSPPPLPPRPAA--V 64 Query: 165 DLGRDR 182 GRDR Sbjct: 65 RAGRDR 70
>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)| Length = 544 Score = 28.9 bits (63), Expect = 7.6 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = +3 Query: 9 ANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRL--PPASRPNTPTPRLAAG 158 AN P AP P+ G +G P P + PP P+TP+P L G Sbjct: 472 ANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASASPPPRPPSTPSPTLNPG 523
>WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)| Length = 641 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/41 (36%), Positives = 16/41 (39%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPR 146 P R P P G P PRLPP + P P PR Sbjct: 463 PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPR 503
>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)| Length = 641 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/41 (36%), Positives = 16/41 (39%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPR 146 P R P P G P PRLPP + P P PR Sbjct: 463 PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPR 503
>WBP11_HUMAN (Q9Y2W2) WW domain-binding protein 11 (WBP-11) (SH3 domain-binding| protein SNP70) (Npw38-binding protein) (NpwBP) Length = 641 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/41 (36%), Positives = 16/41 (39%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPR 146 P R P P G P PRLPP + P P PR Sbjct: 463 PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPR 503
>POLS_RUBVH (P21480) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +3 Query: 15 QTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGG 161 Q + +RAP P ++E+ + Q P+P+ R PP +P P + GG Sbjct: 70 QRKDWSRAPPPPEERQESRS--QTPAPKPSRAPP-QQPQPPRMQTGRGG 115
>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +3 Query: 9 ANQTEPKARAP-RPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRL 149 A +T ++AP RPA T G +P +P + P TPTP L Sbjct: 128 AERTSTTSQAPTRPAPTTLSTTTGPAPTTPVATTVPAPTTPRTPTPDL 175
>NPT2A_RAT (Q06496) Sodium-dependent phosphate transport protein 2A| (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-2a) (Solute carrier family 34 me Length = 637 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 5/27 (18%) Frame = +3 Query: 87 PSPRNPRLPP-----ASRPNTPTPRLA 152 P PR+P+LPP P TP+PRLA Sbjct: 601 PEPRSPQLPPRVFLEELPPATPSPRLA 627
>NPT2A_MOUSE (Q60825) Sodium-dependent phosphate transport protein 2A| (Sodium/phosphate cotransporter 2A) (Na(+)/Pi cotransporter 2A) (Sodium-phosphate transport protein 2A) (Na(+)-dependent phosphate cotransporter 2A) (NaPi-2a) (Solute carrier family 34 Length = 637 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 5/27 (18%) Frame = +3 Query: 87 PSPRNPRLPP-----ASRPNTPTPRLA 152 P PR+P+LPP P TP+PRLA Sbjct: 601 PEPRSPQLPPRVFLEELPPATPSPRLA 627
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +3 Query: 12 NQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 NQT+ K P+P Q+ ++ +P+ P+LP + P+ P P Sbjct: 2450 NQTQEKQGQPKPEMQQQLEQLEQKTNAPQ-PKLPQPAAPSLPQP 2492
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQNP-----SPRNPRLPPASRPNTPTPRLAAGGL 164 + A +T A +P P+ G + AAG P +P P + + P P GGL Sbjct: 233 QNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRPGGGL 291
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQNP-----SPRNPRLPPASRPNTPTPRLAAGGL 164 + A +T A +P P+ G + AAG P +P P + + P P GGL Sbjct: 233 QNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRPGGGL 291
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQNP-----SPRNPRLPPASRPNTPTPRLAAGGL 164 + A +T A +P P+ G + AAG P +P P + + P P GGL Sbjct: 233 QNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRPGGGL 291
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Frame = +3 Query: 24 PKARAPRP-AHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 P APRP A AA + P P PR P S P P P Sbjct: 216 PGQGAPRPGATPGPRPAAAQGGPRPGGPRPSPGSMPPRPNP 256
>POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 992 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +3 Query: 15 QTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGG 161 Q + +RAP P ++E+ + Q P+P+ R PP +P P + GG Sbjct: 69 QRKDWSRAPPPPEERQESRS--QTPAPKPSRAPP-QQPQPPRMQTGRGG 114
>IF2_DESPS (Q6AJY4) Translation initiation factor IF-2| Length = 939 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%) Frame = +3 Query: 54 GQEETAAGKQNPSP--RNPRLPPASR---PNTPTPRLAAGG 161 G+ E ++ PS R P PP +R P+TP+P +AGG Sbjct: 237 GRVELPIQREEPSRPRRKPTRPPVNRSPRPSTPSPNRSAGG 277
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +3 Query: 21 EPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGG 161 +P RAPR A+ + A + P+PR PR A + P P GG Sbjct: 163 KPGGRAPRVANNPFSSGAPAERPAPR-PRGGQAGPGDMPRPGSRPGG 208
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 28.5 bits (62), Expect = 9.9 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 5/60 (8%) Frame = +3 Query: 3 ERANQT-EPKARAPRPAHGQEETAAGKQNPSPRNPRLPPAS----RPNTPTPRLAAGGLD 167 +R QT A APRPA G + P P P PA+ R PR G +D Sbjct: 288 DRPQQTVRYSALAPRPAPGARGPGGPPRGPRPGVPAAAPATPEIQRATRSAPRPGGGAMD 347
>US02_EHV1K (P32517) US1 protein| Length = 303 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 Query: 27 KARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPT 140 ++RAP PA TAA P P +PR P A R T Sbjct: 253 RSRAPAPARS---TAAAATPPRPGDPRAPAARRAGDVT 287
>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2| Length = 925 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTP 137 P A AP+P A K P+P P A +P+ P Sbjct: 210 PAAEAPQPVRPPAPPAPAKPTPAPAPAPRPTAEQPSEP 247
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2157 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQE-ETAAGKQNPSPRNPRLPPASRPNTP 137 + Q++PK+ A E + Q P+ P+ PPA+ NTP Sbjct: 89 KQEQSDPKSSDASTAQPPESQPLPASQTPASNQPKRPPAAPENTP 133
>SCNNG_RAT (P37091) Amiloride-sensitive sodium channel gamma-subunit| (Epithelial Na+ channel gamma subunit) (Gamma ENaC) (Nonvoltage-gated sodium channel 1 gamma subunit) (SCNEG) (Gamma NaCH) Length = 650 Score = 28.5 bits (62), Expect = 9.9 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 6/57 (10%) Frame = +3 Query: 15 QTEPKARAPRPAHGQEETAAGKQNPSP------RNPRLPPASRPNTPTPRLAAGGLD 167 QT P P GQ+ A + P R P P ++ P TP PR LD Sbjct: 578 QTPPSTETPSSRQGQDNPALDTDDDLPTFTSAMRLPPAPGSTVPGTPPPRYNTLRLD 634
>SC10A_HUMAN (Q9Y5Y9) Sodium channel protein type 10 alpha subunit (Sodium| channel protein type X alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.8) (Peripheral nerve sodium channel 3) (hPN3) Length = 1956 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 10/43 (23%) Frame = +3 Query: 72 AGKQNPSPRNPRLPPASRPNT----------PTPRLAAGGLDL 170 AG+Q P PR+P LP S P++ PT LA G +D+ Sbjct: 543 AGQQGPLPRSP-LPQPSNPDSRHGEDEHQPPPTSELAPGAVDV 584
>POLS_RUBVR (P19725) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +3 Query: 30 ARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGG 161 +RAP P ++E+ + Q P+P+ R PP +P P + GG Sbjct: 75 SRAPPPPEERQESRS--QTPAPKPSRAPP-QQPQPPRMQTGRGG 115
>TR240_HUMAN (Q9UHV7) Thyroid hormone receptor-associated protein complex 240 kDa| component (Trap240) (Thyroid hormone receptor-associated protein 1) (Vitamin D3 receptor-interacting protein complex component DRIP250) (DRIP 250) (Activator-recruited cofac Length = 2174 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%) Frame = +3 Query: 87 PSPRNPRLPPASRPNTP-TPRLAAG 158 PSP PR P P TP TPR A G Sbjct: 1002 PSPSTPRFPTPRTPRTPRTPRGAGG 1026
>IF2_SYNY3 (P72689) Translation initiation factor IF-2| Length = 1001 Score = 28.5 bits (62), Expect = 9.9 Identities = 12/46 (26%), Positives = 21/46 (45%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTP 143 + ++++PK + H ++E + G P P P P PTP Sbjct: 72 KEDKSDPKQQKILAIHHKQEKSGGPSPARPTPPPRPKLQAPKAPTP 117
>VGLD_PRVRI (P07645) Protein gp50| Length = 402 Score = 28.5 bits (62), Expect = 9.9 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLGRDRR 185 P A +PRP K P+P P PP P T AAGG R R Sbjct: 262 PSAGSPRPRPRPRPRPRPKPEPAPATP-APPDRLPEPATRDHAAGGRPTPRPPR 314
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 5/58 (8%) Frame = +3 Query: 3 ERANQTEPKARAPRPAHGQEETAAGKQN-----PSPRNPRLPPASRPNTPTPRLAAGG 161 ++A P P P Q G+Q P P +P+L P+ + TP P + G Sbjct: 254 QQAGGPPPPGHGPPPPQHQPSPYGGQQGGWAPPPRPYSPQLGPSQQYRTPPPTNTSRG 311
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +3 Query: 9 ANQTEPKARAPRPAHGQEETAAGKQNPSPRN-PRLPPASRPNTPTPR 146 A+ P A+ PRP + G P+P + PR P +RP R Sbjct: 177 ASAPRPHAQGPRPGNNPFSRKQGMHTPTPGDIPRPHPMARPTADNGR 223
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2160 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +3 Query: 6 RANQTEPKARAPRPAHGQE-ETAAGKQNPSPRNPRLPPASRPNTP 137 + Q++PK+ A E + Q P+ P+ PPA+ NTP Sbjct: 89 KQEQSDPKSSDASTAQPPESQPLPASQTPASNQPKRPPAAPENTP 133
>PERT_BORBR (Q03035) Pertactin precursor (P.94) [Contains: Outer membrane| protein P.68] Length = 916 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/45 (33%), Positives = 18/45 (40%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAG 158 P A P P G + P P P PP +P P P+ AG Sbjct: 571 PPAPKPAPQPGPQP------GPQPPQPPQPPQRQPEAPAPQPPAG 609
>SMUG1_XENLA (Q9YGN6) Single-strand selective monofunctional uracil DNA| glycosylase (EC 3.2.2.-) Length = 281 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 18 TEPKARAPRPAHGQEETAAGKQNPSPRNPR 107 +E +AR A G + T G +PSPRNP+ Sbjct: 228 SEQRARKALMAEGIDVTVKGIMHPSPRNPQ 257
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.5 bits (62), Expect = 9.9 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = +3 Query: 24 PKARAPRPAHGQEETAAGK--QNPSPRNPRL--PPA--SRPNTPTP 143 P A AP P+ G T K P+P P PPA + P+TP P Sbjct: 114 PSAPAPAPSQGPRPTPGPKPAPRPAPAAPEFTAPPAAPAAPSTPAP 159
>ARHGF_HUMAN (O94989) Rho guanine nucleotide exchange factor 15 (Vsm-RhoGEF)| Length = 841 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/51 (27%), Positives = 22/51 (43%) Frame = +3 Query: 12 NQTEPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGL 164 +QT P + + P + P+PR+P PP + TP L G+ Sbjct: 87 SQTSPDSPSSTPTPSPVSRRSASPEPAPRSPVPPPKPSGSPCTPLLPMAGV 137
>IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1579 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 6/37 (16%) Frame = +3 Query: 63 ETAAGKQNPSPRNPR------LPPASRPNTPTPRLAA 155 ETAAG+ P P PR LPP +R + P+P AA Sbjct: 252 ETAAGEPTPEP--PRTSSPTSLPPLARSSLPSPMSAA 286
>IF2_MYCTU (P65131) Translation initiation factor IF-2| Length = 900 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = +3 Query: 21 EPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLG 173 +P R PR + +A P PR PPA RP T P + G G Sbjct: 144 KPGIRTPRVGNNPFSSAQPADRPIPR----PPAPRPGTARPGVPRPGASPG 190
>IF2_MYCBO (P65132) Translation initiation factor IF-2| Length = 900 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = +3 Query: 21 EPKARAPRPAHGQEETAAGKQNPSPRNPRLPPASRPNTPTPRLAAGGLDLG 173 +P R PR + +A P PR PPA RP T P + G G Sbjct: 144 KPGIRTPRVGNNPFSSAQPADRPIPR----PPAPRPGTARPGVPRPGASPG 190 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.134 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,214,278 Number of Sequences: 219361 Number of extensions: 1135277 Number of successful extensions: 5790 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 4566 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5628 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
