ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl21b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190891.1| Oryza sativa (japonica cultivar-group), predic... 86 1e-13
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
3dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
4emb|AJ880370.1| Dioscorea abyssinica microsatellite, clone Dab-2C05 50 0.007
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
6dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
7ref|NM_190888.1| Oryza sativa (japonica cultivar-group), predic... 46 0.11
8ref|NM_190890.1| Oryza sativa (japonica cultivar-group), predic... 46 0.11
9gb|AF200467.1|AF200467 Oryza sativa subtilase mRNA, complete cds 46 0.11
10dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
11dbj|AK063520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
12gb|AC024680.10| Homo sapiens chromosome 8, clone RP11-347D13, co... 44 0.44
13gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408... 44 0.44
14gb|AC066615.7|AC066615 Homo sapiens chromosome 15 clone RP11-90J... 44 0.44
15dbj|AK109067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
16dbj|AK106644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
17emb|AJ276710.1|GMA276710 Glycine max mRNA for putative subtilisi... 42 1.7
18emb|AJ276407.1|GMA276407 Glycine max scs1 gene for putative pre-... 42 1.7
19dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
20gb|AF160513.2| Glycine max subtilisin-type protease precursor (S... 42 1.7
21dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
22gb|DQ289588.1| Fragaria x ananassa UDP-glucose glucosyltransfera... 42 1.7
23ref|XM_426162.1| PREDICTED: Gallus gallus similar to Leucine-ric... 40 6.8
24gb|AC127306.3| Mus musculus BAC clone RP23-290H17 from chromosom... 40 6.8
25gb|AC135860.4| Mus musculus BAC clone RP24-441J10 from chromosom... 40 6.8
26gb|AF547430.1| Mycobacteriophage PG1, complete genome 40 6.8
27emb|AL591501.7| Human DNA sequence from clone RP11-305F18 on chr... 40 6.8
28emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
29gb|AF451873.1| Actinocorallia aurantiaca strain JCM 8201 HSP70 g... 40 6.8
30dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
31emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.8
32emb|CT573098.3| RP43-076G03, complete sequence 40 6.8
33emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
34emb|CT476802.2| Pan troglodytes chromosome X BAC RP43-021M15, co... 40 6.8
35emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on ch... 40 6.8 
>ref|NM_190891.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2409

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 136/167 (81%)
 Strand = Plus / Plus

                                                                       
Query: 220 catgacatgctcaccactcttctccaaagcaaggaggattcttcggcctccatggtctat 279
           ||||| |||||||||||| ||||   ||||||||| ||||||| |||||| ||  || | 
Sbjct: 340 catgatatgctcaccactgttcttggaagcaaggaagattctttggcctctatcatccac 399

                                                                       
Query: 280 aactacaagcatggtttctcgggcttcgccgctatgctcaccgcagaccaagcaacaagg 339
           |||||||||||||||||||| ||||||||||  ||||| || | ||| |||||||     
Sbjct: 400 aactacaagcatggtttctcaggcttcgccgtgatgcttactgaagatcaagcaaagcaa 459

                                                          
Query: 340 cttgcagagtttcctggagtcatcagtgttgaaccgagcaaaacgta 386
           |||||||| ||||| | |||| | ||||| ||||| |||||||||||
Sbjct: 460 cttgcagaatttccggaagtccttagtgtggaaccaagcaaaacgta 506
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                            
Query: 247      agcaaggaggattcttcggcctccatggtctataactacaagcatggtttctcgggcttc 306
                |||||||| ||||||| |||||| ||  || | |||||||||||||||||||| ||||||
Sbjct: 33668968 agcaaggaagattctttggcctctatcatccacaactacaagcatggtttctcaggcttc 33669027

                    
Query: 307      gccg 310
                ||||
Sbjct: 33669028 gccg 33669031



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 275      tctataactacaagcatggtttctcgggctt 305
                ||||||||||||||||||| ||||| |||||
Sbjct: 33661755 tctataactacaagcatgggttctcaggctt 33661785



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 384      gtacaagaccaccaccacacatagctgggattttcttgggctcaactacc 433
                ||||||||| || |||||||  ||||||||||| || ||||| |||||||
Sbjct: 33653795 gtacaagacaacgaccacacggagctgggatttcctggggctgaactacc 33653844



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 275      tctataactacaagcatggtttctc 299
                ||||||||||||||||||| |||||
Sbjct: 33653509 tctataactacaagcatggattctc 33653533
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>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0699H05
          Length = 144850

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 247   agcaaggaggattcttcggcctccatggtctataactacaagcatggtttctcgggcttc 306
             |||||||| ||||||| |||||| ||  || | |||||||||||||||||||| ||||||
Sbjct: 22038 agcaaggaagattctttggcctctatcatccacaactacaagcatggtttctcaggcttc 22097

                 
Query: 307   gccg 310
             ||||
Sbjct: 22098 gccg 22101



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 275   tctataactacaagcatggtttctcgggctt 305
             ||||||||||||||||||| ||||| |||||
Sbjct: 14825 tctataactacaagcatgggttctcaggctt 14855



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 384  gtacaagaccaccaccacacatagctgggattttcttgggctcaactacc 433
            ||||||||| || |||||||  ||||||||||| || ||||| |||||||
Sbjct: 6865 gtacaagacaacgaccacacggagctgggatttcctggggctgaactacc 6914



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 275  tctataactacaagcatggtttctc 299
            ||||||||||||||||||| |||||
Sbjct: 6579 tctataactacaagcatggattctc 6603
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>emb|AJ880370.1| Dioscorea abyssinica microsatellite, clone Dab-2C05
          Length = 303

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 280 aactacaagcatggtttctcgggcttcgccgctatgctcac 320
           |||||||||||||| || ||||||||||| || ||||||||
Sbjct: 70  aactacaagcatgggttttcgggcttcgcagcaatgctcac 30
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 283     tacaagcatggtttctcgggcttcgccgctatgctcaccg 322
               |||||||||||||| || || |||||||| ||||||||||
Sbjct: 9655313 tacaagcatggtttttctggattcgccgcgatgctcaccg 9655274
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>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0693E08
          Length = 157969

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 283    tacaagcatggtttctcgggcttcgccgctatgctcaccg 322
              |||||||||||||| || || |||||||| ||||||||||
Sbjct: 119531 tacaagcatggtttttctggattcgccgcgatgctcaccg 119492
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>ref|NM_190888.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2214

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 125/159 (78%)
 Strand = Plus / Plus

                                                                       
Query: 275 tctataactacaagcatggtttctcgggcttcgccgctatgctcaccgcagaccaagcaa 334
           ||||||||||||||||||| ||||| || || || || ||||| || | ||| |||||| 
Sbjct: 209 tctataactacaagcatggattctcaggatttgctgcaatgctaacagaagagcaagcag 268

                                                                       
Query: 335 caaggcttgcagagtttcctggagtcatcagtgttgaaccgagcaaaacgtacaagacca 394
            |   ||||||||||| || | ||| ||||||||  | |  ||||  | ||||||||| |
Sbjct: 269 aacaacttgcagagttaccagaagtaatcagtgtgcagcgaagcaggaggtacaagacaa 328

                                                  
Query: 395 ccaccacacatagctgggattttcttgggctcaactacc 433
           | |||||||  ||||||||||| || ||||| |||||||
Sbjct: 329 cgaccacacggagctgggatttcctggggctgaactacc 367
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>ref|NM_190890.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2043

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                       
Query: 275 tctataactacaagcatggtttctcgggcttcgccgctatgctcaccgcagaccaagcaa 334
           ||||||||||||||||||| ||||| ||||| || || ||||| || || || || ||| 
Sbjct: 41  tctataactacaagcatgggttctcaggctttgctgccatgctgacagctgagcaggcag 100

                                          
Query: 335 caaggcttgcagagtttcctggagtcatcag 365
            |  |||||||||||| || | |||||||||
Sbjct: 101 aacagcttgcagagttaccagaagtcatcag 131
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>gb|AF200467.1|AF200467 Oryza sativa subtilase mRNA, complete cds
          Length = 2545

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                       
Query: 275 tctataactacaagcatggtttctcgggcttcgccgctatgctcaccgcagaccaagcaa 334
           ||||||||||||||||||| ||||| ||||| || || ||||| || || || || ||| 
Sbjct: 213 tctataactacaagcatgggttctcaggctttgctgccatgctgacagctgagcaggcag 272

                                          
Query: 335 caaggcttgcagagtttcctggagtcatcag 365
            |  |||||||||||| || | |||||||||
Sbjct: 273 aacagcttgcagagttaccagaagtcatcag 303
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>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0684C02
          Length = 80086

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 275   tctataactacaagcatggtttctcgggctt 305
             ||||||||||||||||||| ||||| |||||
Sbjct: 76627 tctataactacaagcatgggttctcaggctt 76657



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 384   gtacaagaccaccaccacacatagctgggattttcttgggctcaactacc 433
             ||||||||| || |||||||  ||||||||||| || ||||| |||||||
Sbjct: 68667 gtacaagacaacgaccacacggagctgggatttcctggggctgaactacc 68716



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 275   tctataactacaagcatggtttctc 299
             ||||||||||||||||||| |||||
Sbjct: 68381 tctataactacaagcatggattctc 68405
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>dbj|AK063520.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H07, full
           insert sequence
          Length = 2462

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 125/159 (78%)
 Strand = Plus / Plus

                                                                       
Query: 275 tctataactacaagcatggtttctcgggcttcgccgctatgctcaccgcagaccaagcaa 334
           ||||||||||||||||||| ||||| || || || || ||||| || | ||| |||||| 
Sbjct: 224 tctataactacaagcatggattctcaggatttgctgcaatgctaacagaagagcaagcag 283

                                                                       
Query: 335 caaggcttgcagagtttcctggagtcatcagtgttgaaccgagcaaaacgtacaagacca 394
            |   ||||||||||| || | ||| ||||||||  | |  ||||  | ||||||||| |
Sbjct: 284 aacaacttgcagagttaccagaagtaatcagtgtgcagcgaagcaggaggtacaagacaa 343

                                                  
Query: 395 ccaccacacatagctgggattttcttgggctcaactacc 433
           | |||||||  ||||||||||| || ||||| |||||||
Sbjct: 344 cgaccacacggagctgggatttcctggggctgaactacc 382
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>gb|AC024680.10| Homo sapiens chromosome 8, clone RP11-347D13, complete sequence
          Length = 81715

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 111   cttttccatgctgttatccaga 132
             ||||||||||||||||||||||
Sbjct: 15490 cttttccatgctgttatccaga 15469
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>gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408J6 map 15q21.1, complete
             sequence
          Length = 193804

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 224   acatgctcaccactcttctcca 245
             ||||||||||||||||||||||
Sbjct: 68384 acatgctcaccactcttctcca 68405
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>gb|AC066615.7|AC066615 Homo sapiens chromosome 15 clone RP11-90J19 map 15q21.1, complete
              sequence
          Length = 175001

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 224    acatgctcaccactcttctcca 245
              ||||||||||||||||||||||
Sbjct: 163864 acatgctcaccactcttctcca 163885
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>dbj|AK109067.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-F11, full
           insert sequence
          Length = 1572

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 384 gtacaagaccaccaccacacatagctgggattttcttgggctcaactacc 433
           ||||||||| || |||||||  ||||||||||| || ||||| |||||||
Sbjct: 752 gtacaagacaacgaccacacggagctgggatttcctggggctgaactacc 801



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 275 tctataactacaagcatggtttctc 299
           ||||||||||||||||||| |||||
Sbjct: 466 tctataactacaagcatggattctc 490
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>dbj|AK106644.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E09, full
            insert sequence
          Length = 2875

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 384  gtacaagaccaccaccacacatagctgggattttcttgggctcaactacc 433
            ||||||||| || |||||||  ||||||||||| || ||||| |||||||
Sbjct: 2560 gtacaagacaacgaccacacggagctgggatttcctggggctgaactacc 2511



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 275  tctataactacaagcatggtttctc 299
            ||||||||||||||||||| |||||
Sbjct: 2846 tctataactacaagcatggattctc 2822
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>emb|AJ276710.1|GMA276710 Glycine max mRNA for putative subtilisin precursor (scs1 gene)
          Length = 2379

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 280 aactacaagcatggtttctcgggcttcgc 308
           |||||||||||||||||||| || |||||
Sbjct: 244 aactacaagcatggtttctctgggttcgc 272
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>emb|AJ276407.1|GMA276407 Glycine max scs1 gene for putative pre-pro-subtilisin, exons 1-9
          Length = 7235

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 280  aactacaagcatggtttctcgggcttcgc 308
            |||||||||||||||||||| || |||||
Sbjct: 2775 aactacaagcatggtttctctgggttcgc 2803
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 282      ctacaagcatggtttctcgggcttcgccgctatgctcaccg 322
                ||||| |||||| ||||| |||||||||||  |||||||||
Sbjct: 20493483 ctacaggcatggcttctccggcttcgccgccgtgctcaccg 20493523
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>gb|AF160513.2| Glycine max subtilisin-type protease precursor (SSTP-1) mRNA,
           complete cds
          Length = 2391

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 280 aactacaagcatggtttctcgggcttcgc 308
           |||||||||||||||||||| || |||||
Sbjct: 257 aactacaagcatggtttctctgggttcgc 285
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 282   ctacaagcatggtttctcgggcttcgccgctatgctcaccg 322
             ||||| |||||| ||||| |||||||||||  |||||||||
Sbjct: 11130 ctacaggcatggcttctccggcttcgccgccgtgctcaccg 11170
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>gb|DQ289588.1| Fragaria x ananassa UDP-glucose glucosyltransferase (GT7) mRNA,
           complete cds
          Length = 1464

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 231 caccactcttctccaaagcaa 251
           |||||||||||||||||||||
Sbjct: 149 caccactcttctccaaagcaa 169
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>ref|XM_426162.1| PREDICTED: Gallus gallus similar to Leucine-rich repeat-containing
           G protein-coupled receptor 4 precursor (G
           protein-coupled receptor 48) (LOC428605), mRNA
          Length = 3642

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 174 aggggatgtgaagcatgggcaccc 197
           ||||||||||||||||||| ||||
Sbjct: 638 aggggatgtgaagcatgggtaccc 615
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>gb|AC127306.3| Mus musculus BAC clone RP23-290H17 from chromosome 7, complete sequence
          Length = 204478

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 436    tcctcccacacaccggccagtgag 459
              ||||||||||||||||||| ||||
Sbjct: 152135 tcctcccacacaccggccattgag 152112
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>gb|AC135860.4| Mus musculus BAC clone RP24-441J10 from chromosome 7, complete
            sequence
          Length = 196609

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 436  tcctcccacacaccggccagtgag 459
            ||||||||||||||||||| ||||
Sbjct: 1461 tcctcccacacaccggccattgag 1438
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>gb|AF547430.1| Mycobacteriophage PG1, complete genome
          Length = 68999

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  ggacgaggtcgtggcctcgc 217
            ||||||||||||||||||||
Sbjct: 6247 ggacgaggtcgtggcctcgc 6266
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>emb|AL591501.7| Human DNA sequence from clone RP11-305F18 on chromosome X Contains the
             3' end of a novel gene, complete sequence
          Length = 174803

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tgctatgcttttccatgctg 123
             ||||||||||||||||||||
Sbjct: 48244 tgctatgcttttccatgctg 48263
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>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete
             sequence
          Length = 139971

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tagtactccactccactagc 26
             ||||||||||||||||||||
Sbjct: 91180 tagtactccactccactagc 91199
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>gb|AF451873.1| Actinocorallia aurantiaca strain JCM 8201 HSP70 gene, partial cds
          Length = 873

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 acccggacgaggtcgtggcc 213
           ||||||||||||||||||||
Sbjct: 548 acccggacgaggtcgtggcc 567
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
             complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tagtactccactccactagc 26
             ||||||||||||||||||||
Sbjct: 91180 tagtactccactccactagc 91199
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>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete
             sequence
          Length = 72636

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tagtactccactccactagc 26
             ||||||||||||||||||||
Sbjct: 37911 tagtactccactccactagc 37930
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>emb|CT573098.3| RP43-076G03, complete sequence
          Length = 175456

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tgctatgcttttccatgctg 123
             ||||||||||||||||||||
Sbjct: 29354 tgctatgcttttccatgctg 29373
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>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
             complete sequence
          Length = 145517

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tagtactccactccactagc 26
             ||||||||||||||||||||
Sbjct: 22429 tagtactccactccactagc 22448
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>emb|CT476802.2| Pan troglodytes chromosome X BAC RP43-021M15, complete sequence
          Length = 172650

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tgctatgcttttccatgctg 123
             ||||||||||||||||||||
Sbjct: 91389 tgctatgcttttccatgctg 91408
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>emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on chromosome 11, complete
             sequence
          Length = 205405

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   ctggagtcatcagtgttgaa 372
             ||||||||||||||||||||
Sbjct: 19903 ctggagtcatcagtgttgaa 19884


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,307,229
Number of Sequences: 3902068
Number of extensions: 4307229
Number of successful extensions: 64871
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64709
Number of HSP's gapped (non-prelim): 161
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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