Clone Name | bastl21a11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | K1543_HUMAN (Q9P1Y5) Protein KIAA1543 | 32 | 0.94 | 2 | K1543_MOUSE (Q80VC9) Protein KIAA1543 | 32 | 0.94 | 3 | LEPA2_LACPL (Q88T65) GTP-binding protein lepA2 | 30 | 3.6 | 4 | LASS1_MOUSE (P27545) LAG1 longevity assurance homolog 1 (UOG-1 p... | 29 | 7.9 |
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>K1543_HUMAN (Q9P1Y5) Protein KIAA1543| Length = 1249 Score = 32.0 bits (71), Expect = 0.94 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = +2 Query: 233 EIAARAWLESFPDGRPPTEPEVDAYIDAHRPELPSLPRSQL------HQRLLALRGDQVL 394 E+ RAW ++ P P P + A R +P+LP + HQ +L V+ Sbjct: 82 ELYCRAWRQALPQLETPPNPSALLALLARRGTVPALPERPVREADLRHQPILMGAHLAVI 141 Query: 395 DPDQSAFPYRFQRT 436 D +AF + + +T Sbjct: 142 DALMAAFAFEWTKT 155
>K1543_MOUSE (Q80VC9) Protein KIAA1543| Length = 1252 Score = 32.0 bits (71), Expect = 0.94 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Frame = +2 Query: 233 EIAARAWLESFPDGRPPTEPEVDAYIDAHRPELPSLPRSQL------HQRLLALRGDQVL 394 E+ RAW ++ P P P + A R +PSLP + HQ +L V+ Sbjct: 82 ELYCRAWRQALPQLEPSPSPSALLALLARRGTVPSLPEHPVREADLKHQPILMGAHLAVI 141 Query: 395 DPDQSAFPYRFQRT 436 D AF + + +T Sbjct: 142 DALMVAFSFEWTKT 155
>LEPA2_LACPL (Q88T65) GTP-binding protein lepA2| Length = 595 Score = 30.0 bits (66), Expect = 3.6 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +2 Query: 296 VDAYIDAHRPELPSLPRSQLHQRLLALRGDQVLDPDQSAFPY 421 V A ++A + LP+ P+ LHQ L AL D + DP Q Y Sbjct: 172 VPAVLEAIKQRLPA-PQGDLHQPLKALVFDSLYDPYQGVIAY 212
>LASS1_MOUSE (P27545) LAG1 longevity assurance homolog 1 (UOG-1 protein)| Length = 350 Score = 28.9 bits (63), Expect = 7.9 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +3 Query: 411 HSHTGSSEPISGSLCISGWKLLRWTR*LH 497 H+H + E + LC GW LRW H Sbjct: 52 HAHLAAPELLLAVLCALGWTALRWAATTH 80 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,922,444 Number of Sequences: 219361 Number of extensions: 516557 Number of successful extensions: 2308 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2193 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2300 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)