ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl21a08 |
|---|---|
| Clone Library Name | barley_pub |
>SEC9_KLULA (Q6CSD1) Protein transport protein SEC9| Length = 556 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%) Frame = +1 Query: 238 NPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXXFGA 417 +P+G S +SP+G S +P+ T G+ P NNNP+ +G+ Sbjct: 118 SPYGNSDSSPYGNASASPYDT--GYNAPLQQNNNPYG----------SMNNSYSNKSYGS 165 Query: 418 TS----TFGQPSAPAFGATSTGAFGQQ 486 S T+ PS A + + GA GQ+ Sbjct: 166 NSYSGDTYASPSPQASSSNNNGATGQR 192
>NUP54_DROME (Q9V6B9) Probable nucleoporin Nup54| Length = 610 Score = 42.7 bits (99), Expect = 6e-04 Identities = 39/109 (35%), Positives = 46/109 (42%), Gaps = 13/109 (11%) Frame = +1 Query: 220 AMFGANNPFGQSS--ASPFGQTSTNPFGTQQGFGQPC------TTNNNPFALKPFXXXXX 375 + FG+N G +S A G +PFG QP T+ F +P Sbjct: 2 SFFGSNTSLGATSTPAKTTGGLFGSPFGGTAATSQPAPAFGAQATSTPAFGAQP------ 55 Query: 376 XXXXXXXXXXXFGATSTFGQPSA-PAFGA-TSTGAFGQQ---STPAFGA 507 FGA S FG +A PAFGA T T AFG STPAFGA Sbjct: 56 -------ATSAFGAGSAFGATAAAPAFGAATGTSAFGGSAFGSTPAFGA 97 Score = 33.1 bits (74), Expect = 0.46 Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 10/105 (9%) Frame = +1 Query: 226 FGANNPFGQSSASP---------FGQTSTNPFGTQQG-FGQPCTTNNNPFALKPFXXXXX 375 FG+ FG ++ + FG P +Q G FG P T+ P A F Sbjct: 89 FGSTPAFGAATTTTAGTGLGGGGFGGFGAAPATSQAGLFGAPATSAAPP-AFSGFGQQAA 147 Query: 376 XXXXXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAFGAT 510 FG T+T SAPAFG T AFG+T Sbjct: 148 ASTAPASGFSGFGTTTT----SAPAFGGFGTSQSTGFGGGAFGST 188
>NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)| (153 kDa nucleoporin) Length = 1468 Score = 38.1 bits (87), Expect = 0.014 Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 22/117 (18%) Frame = +1 Query: 223 MFG-ANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXX 399 +FG A+NP S+ ++ST+ G+P TT++ A PF Sbjct: 1220 VFGQASNPVSSSAFGNSAESSTSQPLLFPQDGKPATTSSTASAAPPFVFGTGASSNSTVS 1279 Query: 400 XX-XFGATST---------FGQ----PSA-PAFGATSTGAFGQQ------STPAFGA 507 FGAT+T FG PSA PAFGA T FGQ + P+FG+ Sbjct: 1280 SGFTFGATTTSSSSGSFFVFGTGHSAPSASPAFGANQTPTFGQSQGASQPNPPSFGS 1336
>NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98| kDa nucleoporin) Length = 937 Score = 37.7 bits (86), Expect = 0.019 Identities = 37/128 (28%), Positives = 42/128 (32%), Gaps = 34/128 (26%) Frame = +1 Query: 223 MFGANNPFGQSSAS-PFGQTSTNP-----FGTQQGFGQPCTTNNNPFALKPFXX--XXXX 378 +FG N S S PFGQ +T P FG GQP T F + Sbjct: 272 LFGQQNQQTTSLFSKPFGQATTTPNTGFSFGNTSTLGQPSTNTMGLFGVTQASQPGGLFG 331 Query: 379 XXXXXXXXXXFGA-TSTFGQP-------------------------SAPAFGATSTGAFG 480 FG T FGQP SAP+FG TS G FG Sbjct: 332 TATNTSTGTAFGTGTGLFGQPNTGFGAVGSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFG 391 Query: 481 QQSTPAFG 504 + T G Sbjct: 392 NKPTLTLG 399
>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)| Length = 1778 Score = 37.4 bits (85), Expect = 0.024 Identities = 30/96 (31%), Positives = 35/96 (36%), Gaps = 1/96 (1%) Frame = +1 Query: 226 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXX 405 FG NN Q + FG S P T G TT +P Sbjct: 17 FGQNN---QQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFGSNTNGGL------ 67 Query: 406 XFGATSTFGQPSAPAFGATS-TGAFGQQSTPAFGAT 510 FG + FG +S TG FGQ +TPAFG T Sbjct: 68 -FGNRNNTTTTGGTGFGMSSGTGMFGQSNTPAFGGT 102 Score = 30.0 bits (66), Expect = 3.9 Identities = 30/92 (32%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Frame = +1 Query: 226 FGANNPFG-QSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXX 402 FGANN + S FG T+T P FGQ NN P KP Sbjct: 437 FGANNNAATKPSGFGFGSTTTTPASGGFSFGQ--NANNAP---KPAFGSTATTAPKPAGT 491 Query: 403 XXFGATSTFGQPSAPAFGATSTGA--FGQQST 492 FG G + A AT TG FG +T Sbjct: 492 GLFGGLGA-GANTNTATNATGTGGSLFGNANT 522 Score = 29.3 bits (64), Expect = 6.6 Identities = 32/105 (30%), Positives = 41/105 (39%), Gaps = 12/105 (11%) Frame = +1 Query: 226 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXX 405 FGANN ++ +P T+ FG NNN A KP Sbjct: 410 FGANNNTANNNTAP-----TSTFGGNNSSNFSFGANNNA-ATKP-------------SGF 450 Query: 406 XFGATST--------FGQPS----APAFGATSTGAFGQQSTPAFG 504 FG+T+T FGQ + PAFG+T+T A T FG Sbjct: 451 GFGSTTTTPASGGFSFGQNANNAPKPAFGSTATTAPKPAGTGLFG 495
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 37.0 bits (84), Expect = 0.032 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 12/108 (11%) Frame = +1 Query: 220 AMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXX 399 ++FGA + SS+ FGQ+S N G FGQ +N F P Sbjct: 1770 SVFGAASSTSSSSSFSFGQSSPNTGGGL--FGQ---SNAPAFGQSPGFGQGGSVFGGTSA 1824 Query: 400 XXXFGATSTFGQPSAPAFGATSTGA------------FGQQSTPAFGA 507 ATS F A FG+++TG+ FGQQS+ + G+ Sbjct: 1825 ATTTAATSGFSFCQASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGS 1872 Score = 32.0 bits (71), Expect = 1.0 Identities = 26/97 (26%), Positives = 32/97 (32%) Frame = +1 Query: 214 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXX 393 Q A A + FGQ + S + P + GF P P Sbjct: 1676 QVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVF-------------- 1721 Query: 394 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAFG 504 FG S FGQ ++ A S G S PAFG Sbjct: 1722 -GQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFG 1757 Score = 31.6 bits (70), Expect = 1.3 Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 27/124 (21%) Frame = +1 Query: 214 QPAMFGANNP-FGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXX 390 Q + G ++P FG ++ FGQT+ FG FGQ ++ + F+ Sbjct: 1702 QVSSSGFSSPAFGTTAPGVFGQTT---FGQASVFGQSASSAASVFSFSQ----------- 1747 Query: 391 XXXXXXFGATSTFGQP--------SAPAFGATST------------------GAFGQQST 492 F + FGQP S FGA S+ G FGQ + Sbjct: 1748 ----PGFSSVPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNA 1803 Query: 493 PAFG 504 PAFG Sbjct: 1804 PAFG 1807 Score = 28.9 bits (63), Expect = 8.6 Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 28/119 (23%) Frame = +1 Query: 214 QPAMFGANNP---FGQSSASP---FGQTSTNPFGTQQGFGQPC----------------T 327 Q + FG++N FGQ++++ FGQ S++ G+ G G Sbjct: 1838 QASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDA 1897 Query: 328 TNNNPFALKPFXXXXXXXXXXXXXXXXFGATST------FGQPSAPAFGATSTGAFGQQ 486 N NPF+ FG+T+T FG A FG ++ +FG+Q Sbjct: 1898 ANKNPFS---------------SASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQ 1941
>NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore protein| NUP100/NSP100) Length = 959 Score = 37.0 bits (84), Expect = 0.032 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 17/106 (16%) Frame = +1 Query: 223 MFGA-NNPFGQSSASPFGQTSTNPFGT--QQG--FGQPCTTNNNPFALKPFXXXXXXXXX 387 +FGA NN ++ S FG ++ FGT QQG FGQ NN F + Sbjct: 188 IFGAGNNSQSNTTGSLFGNQQSSAFGTNNQQGSLFGQQSQNTNNAFGNQNQLGGSSFGSK 247 Query: 388 XXXXXXXFGATST------------FGQPSAPAFGATSTGAFGQQS 489 FG ++ FGQ ++ G++++G FGQ S Sbjct: 248 PVGSGSLFGQSNNTLGNTTNNRNGLFGQMNSSNQGSSNSGLFGQNS 293 Score = 30.0 bits (66), Expect = 3.9 Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Frame = +1 Query: 235 NNPFGQSSAS--PFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXX 408 N+ FG + + PFG NP Q G G N+ F KP Sbjct: 435 NSLFGATKLTNMPFGG---NPTANQSGSG------NSLFGTKPASTTGSLFGNNTASTTV 485 Query: 409 FGATSTFGQPSAPAFGATSTGAFG----QQSTPAFG 504 FG + + T+TG FG QS PA G Sbjct: 486 PSTNGLFGNNANNSTSTTNTGLFGAKPDSQSKPALG 521
>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58| Length = 546 Score = 35.8 bits (81), Expect = 0.070 Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 8/98 (8%) Frame = +1 Query: 235 NNPFGQSSASP----FGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXX 402 NN G ++A+ FG FG T+ F P Sbjct: 7 NNAIGGATAATGAFAFGARPATTTAPPPSFG--AATSTPTFGAAPATTSLFAAPAATPAF 64 Query: 403 XXFGATSTFGQP-SAPAFGATSTG--AFG-QQSTPAFG 504 AT FG P S P FGATST AFG +TPAFG Sbjct: 65 GAPAATPAFGAPASTPGFGATSTAAPAFGTAAATPAFG 102
>NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore protein| NUP116/NSP116) Length = 1113 Score = 35.0 bits (79), Expect = 0.12 Identities = 29/96 (30%), Positives = 34/96 (35%), Gaps = 2/96 (2%) Frame = +1 Query: 220 AMFGANNPFGQSSASPFGQTSTNPFGTQQG--FGQPCTTNNNPFALKPFXXXXXXXXXXX 393 ++FG NN QS+ FGQ N +Q G FGQ NN PF Sbjct: 468 SIFGQNNQQQQSTGGLFGQ-QNNQSQSQPGGLFGQTNQNNNQPFGQNGLQQPQQNNSLFG 526 Query: 394 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAF 501 FG TS F + S QQS F Sbjct: 527 AKPTGFGNTSLFSNSTTNQSNGISGNNLQQQSGGLF 562 Score = 29.3 bits (64), Expect = 6.6 Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 4/93 (4%) Frame = +1 Query: 226 FGANNPFGQSSASPFGQTSTNPFGTQQGFG----QPCTTNNNPFALKPFXXXXXXXXXXX 393 FGAN P +S FG T+ NP G Q TN F + Sbjct: 249 FGANKP--ATSGGLFGNTTNNPTNGTNNTGLFGQQNSNTNGGLFGQQQ------------ 294 Query: 394 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQST 492 FGA + + AFG + GAF QQ T Sbjct: 295 ---NSFGANNV---SNGGAFGQVNRGAFPQQQT 321
>NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)| (153 kDa nucleoporin) Length = 1475 Score = 34.7 bits (78), Expect = 0.16 Identities = 38/116 (32%), Positives = 47/116 (40%), Gaps = 28/116 (24%) Frame = +1 Query: 244 FGQSS----ASPFGQTSTNPFGTQQGFGQP---CTTNNNPFALKPFXXX-XXXXXXXXXX 399 FGQSS +S FG T+ + F Q TT++ A+ PF Sbjct: 1228 FGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTS 1287 Query: 400 XXXFGATST---------FGQ----PSA-PAFGATSTGAFGQQ------STPAFGA 507 FGAT+T FG PSA PAFGA T FGQ + P FG+ Sbjct: 1288 GFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGS 1343 Score = 30.0 bits (66), Expect = 3.9 Identities = 23/97 (23%), Positives = 32/97 (32%), Gaps = 4/97 (4%) Frame = +1 Query: 232 ANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXXF 411 + + F S P + S P FG +T + A KP Sbjct: 1147 SKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATS 1206 Query: 412 GATSTFGQPSAPAFGATSTGAFGQQSTP----AFGAT 510 FG ++ + +T FGQ S P AFG T Sbjct: 1207 AGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNT 1243
>NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)| (Rev-interacting protein) (Rev/Rex activation domain-binding protein) Length = 562 Score = 34.3 bits (77), Expect = 0.20 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 1/90 (1%) Frame = +1 Query: 241 PFGQSSASPFGQT-STNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXXFGA 417 P S +PFG T STNPF G +TN PF Sbjct: 418 PASSSVPAPFGATPSTNPFVAAAGPSVASSTN-------PFQTNARGATAATFGTASMSM 470 Query: 418 TSTFGQPSAPAFGATSTGAFGQQSTPAFGA 507 + FG P+ + + +G+F Q + PA A Sbjct: 471 PTGFGTPAPYSLPTSFSGSFQQPAFPAQAA 500
>NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 562 Score = 34.3 bits (77), Expect = 0.20 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 1/90 (1%) Frame = +1 Query: 241 PFGQSSASPFGQT-STNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXXFGA 417 P S +PFG T STNPF G +TN PF Sbjct: 418 PASSSVPAPFGATPSTNPFVAAAGPSVASSTN-------PFQTNARGATAATFGTASMSM 470 Query: 418 TSTFGQPSAPAFGATSTGAFGQQSTPAFGA 507 + FG P+ + + +G+F Q + PA A Sbjct: 471 PAGFGTPAPYSLPTSFSGSFQQPAFPAQAA 500
>GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-) (Germline| helicase 4) Length = 1156 Score = 34.3 bits (77), Expect = 0.20 Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 18/107 (16%) Frame = +1 Query: 238 NPFGQSSASPFGQTSTNPFG--TQQGFG--QPCTTNNNPFALKPFXXXXXXXXXXXX--- 396 N FG S+S FG S FG + G G +P T ++ F K Sbjct: 328 NGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSGGTFGSGFGGKP 387 Query: 397 XXXXFGATST-----------FGQPSAPAFGATSTGAFGQQSTPAFG 504 FGA ST FG S P FG S+ FG FG Sbjct: 388 TSTGFGAPSTTDSSSGQQTAGFGGASKPGFGGDSSTGFGSGLKAGFG 434 Score = 29.6 bits (65), Expect = 5.0 Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 10/102 (9%) Frame = +1 Query: 229 GANNP-FGQSSASPFGQTSTNPFG-----TQQGFGQPCTTNNNPFALKPFXXXXXXXXXX 390 GA+ P FG S++ FG FG T + G P T L P Sbjct: 411 GASKPGFGGDSSTGFGSGLKAGFGGHRASTAENSGLPTETTGFGGKLPP----------- 459 Query: 391 XXXXXXFGATST----FGQPSAPAFGATSTGAFGQQSTPAFG 504 FGA+S+ FGQ S GAT G FG S+ +FG Sbjct: 460 ----AGFGASSSNESAFGQQSKGFGGATKNG-FGGDSSNSFG 496
>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (DNup214) Length = 1711 Score = 33.9 bits (76), Expect = 0.27 Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 15/107 (14%) Frame = +1 Query: 235 NNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXXFG 414 +NP G ASPFG + FG+ P + + F FG Sbjct: 1528 SNPVGSPQASPFGGGGNSIFGSPAT--APPASGGSIFGGGSSSGGFGSFTQTTPAQGGFG 1585 Query: 415 -----------ATSTFGQPSAPAFGATSTGAFGQQ----STPAFGAT 510 A + FG P AP T+ G FG + +PAFGA+ Sbjct: 1586 GGFGQGGGGSVAQTGFGSPQAPQQQTTTPGGFGAKPVFGGSPAFGAS 1632
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 33.9 bits (76), Expect = 0.27 Identities = 40/123 (32%), Positives = 47/123 (38%), Gaps = 24/123 (19%) Frame = +1 Query: 214 QPA-MFGANNPFGQSSASPFG-QTSTNPFGTQQGFGQPCTTNNNP----FALKPFXXXXX 375 QPA MFG + P SSA FG Q+ TNP G T NNP F P Sbjct: 1007 QPASMFGTSTP-APSSAFAFGNQSGTNPAAPAGFGGITNTATNNPPSTGFTFTP------ 1059 Query: 376 XXXXXXXXXXXFGATST-----------------FGQPSAPAFGATSTG-AFGQQSTPAF 501 FGA +T G+PS PA STG +FG + AF Sbjct: 1060 -SNAGSTAAPMFGAGNTPNPSGSINNASQAFAFGSGEPSNPASNPPSTGFSFGAATPSAF 1118 Query: 502 GAT 510 A+ Sbjct: 1119 NAS 1121
>NUPL_MOUSE (Q8K2K6) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 561 Score = 33.9 bits (76), Expect = 0.27 Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 1/98 (1%) Frame = +1 Query: 217 PAMFGANNPFGQSSASPFGQT-STNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXX 393 P A S +PFG T STNPF G +TN PF Sbjct: 409 PVGASAQTQPASSGPAPFGATPSTNPFVAATGPSAASSTN-------PFQTNARGATAAT 461 Query: 394 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAFGA 507 + FG P+ + + +G+F Q + PA A Sbjct: 462 FGTASMSMPAGFGTPAQYSLPTSFSGSFQQPAFPAQAA 499
>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I| Length = 598 Score = 33.9 bits (76), Expect = 0.27 Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Frame = +1 Query: 226 FGANNPFGQ--SSASPFGQTSTNPFGTQQGFGQPCTT--NNNPFALKPFXXXXXXXXXXX 393 F P GQ S+A+ G T+T+ GT FG+P TT N P A Sbjct: 270 FSFGKPAGQAASTATDKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDN 329 Query: 394 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAFGA 507 FG TS + ++ ATS + PA GA Sbjct: 330 KPTFSFGNTSKPTENTSTT--ATSAPPLSNNTKPAEGA 365 Score = 30.0 bits (66), Expect = 3.9 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Frame = +1 Query: 229 GANNPFGQSS----ASPFGQTSTNPFGTQQGFGQPCTTNNNPFAL-KPFXXXXXXXXXXX 393 G+ N G S +S G +TNP G+ FG ++NN F KP Sbjct: 112 GSANSTGDKSKNTASSATGAATTNPSGSTFNFG----SSNNSFNFGKPASTTNTTTPAAA 167 Query: 394 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAFGA 507 S FG+P+A + + A +TPA G+ Sbjct: 168 STG------SLFGKPAATGTTSNAPPASSTSTTPATGS 199
>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor| [Contains: Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore complex protein Nup96 (Nucleoporin Nup96) (96 kDa nucleoporin)] Length = 1729 Score = 33.5 bits (75), Expect = 0.35 Identities = 36/128 (28%), Positives = 42/128 (32%), Gaps = 34/128 (26%) Frame = +1 Query: 223 MFGANNPFGQSSAS-PFGQTSTNP-----FGTQQGFGQPCTTN---------NNPFALKP 357 +FG N S S PFGQ +T FG GQP T + P L Sbjct: 273 LFGQQNQQTTSLFSKPFGQATTTQNTGFSFGNTSTIGQPSTNTMGLFGVTQASQPGGLFG 332 Query: 358 FXXXXXXXXXXXXXXXXFGATST-----------------FGQP--SAPAFGATSTGAFG 480 FG T+T FG SAP+FG TS G FG Sbjct: 333 TATNTSTGTAFGTGTGLFGQTNTGFGAVGSTLFGNNKLTTFGSSTTSAPSFGTTSGGLFG 392 Query: 481 QQSTPAFG 504 + T G Sbjct: 393 NKPTLTLG 400 Score = 30.4 bits (67), Expect = 3.0 Identities = 29/95 (30%), Positives = 32/95 (33%), Gaps = 6/95 (6%) Frame = +1 Query: 244 FGQSSASPFGQTSTNPFGTQQ-----GFGQPCTTNNNPFALKPF-XXXXXXXXXXXXXXX 405 FG +S FG T GT GFG T+ N+ F KP Sbjct: 383 FGTTSGGLFGNKPTLTLGTNTNTSNFGFGTN-TSGNSIFGSKPAPGTLGTGLGAGFGTAL 441 Query: 406 XFGATSTFGQPSAPAFGATSTGAFGQQSTPAFGAT 510 G S FG G TGAFG P F T Sbjct: 442 GAGQASLFGNNQPKIGGPLGTGAFG---APGFNTT 473
>LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)| Length = 255 Score = 33.1 bits (74), Expect = 0.46 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -2 Query: 502 QRPGWTAGQRRQLMWRQRPERMAGQRWR*RQKARWSLSAPQMQ 374 Q+ W GQR+QL Q+ ++ Q + +Q+ +W PQMQ Sbjct: 45 QKQQWPEGQRQQLWPEQQQQQWPEQHQQAQQQQQWPQQQPQMQ 87 Score = 30.8 bits (68), Expect = 2.3 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -2 Query: 478 QRRQLMWRQRPERMAGQRWR*RQKARWSLSAPQMQ 374 Q++Q W ++PE+ Q+W +Q+ +WS Q Q Sbjct: 147 QQQQQQWPEQPEQQQQQQWPEQQQQQWSDQNQQQQ 181
>NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 561 Score = 32.7 bits (73), Expect = 0.60 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 1/86 (1%) Frame = +1 Query: 253 SSASPFGQT-STNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXXFGATSTF 429 S +PFG T STNPF G +TN PF + F Sbjct: 421 SGPAPFGATPSTNPFVAATGPSAASSTN-------PFQTNARGATAATFGTASMSMPAGF 473 Query: 430 GQPSAPAFGATSTGAFGQQSTPAFGA 507 G P+ + + +G+F Q PA A Sbjct: 474 GTPAQYSLPTSFSGSFQQPPFPAQAA 499
>ICEN_PSESY (P06620) Ice nucleation protein| Length = 1200 Score = 32.0 bits (71), Expect = 1.0 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Frame = +1 Query: 226 FGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPCTTNNNPFALKPFXXXXXXXXXXX 393 +G+ + G +S+ G ST G + G+G T N +L Sbjct: 850 YGSTSTAGYASSLIAGYGSTQTAGYESTLTAGYGSTQTAQENS-SLTTGYGSTSTAGFAS 908 Query: 394 XXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPAFGAT 510 +G+T T G S +G+T T +G T +G+T Sbjct: 909 SLISGYGSTQTAGYKSTLTAGYGSTQTAEYGSSLTAGYGST 949
>ICEK_PSESX (O30611) Ice nucleation protein| Length = 1148 Score = 32.0 bits (71), Expect = 1.0 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Frame = +1 Query: 226 FGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPCTTNNNPFALKPFXXXXXXXXXXX 393 +G+ + G +S+ G ST G + G+G T N +L Sbjct: 798 YGSTSTAGYASSLIAGYGSTQTAGYESTLTAGYGSTQTAQENS-SLTTGYGSTSTAGFAS 856 Query: 394 XXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPAFGAT 510 +G+T T G S +G+T T +G T +G+T Sbjct: 857 SLIAGYGSTQTAGYKSTLTAGYGSTQTAEYGSSLTAGYGST 897
>ICEV_PSESX (O33479) Ice nucleation protein| Length = 1196 Score = 32.0 bits (71), Expect = 1.0 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Frame = +1 Query: 226 FGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPCTTNNNPFALKPFXXXXXXXXXXX 393 +G+ + G +S+ G ST G + G+G T N +L Sbjct: 846 YGSTSTAGYASSLIAGYGSTQTAGYESTLTAGYGSTQTAQENS-SLTTGYGSTSTAGFAS 904 Query: 394 XXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPAFGAT 510 +G+T T G S +G+T T +G T +G+T Sbjct: 905 SLIAGYGSTQTAGYKSTLTAGYGSTQTAEYGSSLTAGYGST 945
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 31.6 bits (70), Expect = 1.3 Identities = 33/102 (32%), Positives = 38/102 (37%), Gaps = 10/102 (9%) Frame = +1 Query: 235 NNPFGQSSASPF-----GQTSTNPFGTQQGFGQPCTTNNNPFALKP-FXXXXXXXXXXXX 396 N PF SSA P G S FG G +P AL P F Sbjct: 914 NIPFS-SSAKPALPTYPGANSQPTFGATDGATKP--------ALAPSFGSSFTFGNSVAS 964 Query: 397 XXXXFGATSTFGQPSAPAFG----ATSTGAFGQQSTPAFGAT 510 A +TFG + PAFG A ST + PAFG+T Sbjct: 965 APSAAPAPATFGSAAQPAFGGLKAAASTFGAPASTQPAFGST 1006
>ICEA_PANAN (P20469) Ice nucleation protein inaA| Length = 1322 Score = 31.6 bits (70), Expect = 1.3 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 6/103 (5%) Frame = +1 Query: 220 AMFGANNPFGQSSASP--FGQTSTNPFGTQ--QGFGQPCTTNNNPFALKPFXXXXXXXXX 387 A +G+ G+ S +G T T G+ G+G T ++ + + Sbjct: 418 AGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAQKG 477 Query: 388 XXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPAFGAT 510 +G+TST G S+ +G+T T +G T +G+T Sbjct: 478 SDLTAG-YGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGST 519 Score = 29.3 bits (64), Expect = 6.6 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Frame = +1 Query: 229 GANNPFGQSSASPFGQTSTNPFGTQ--QGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXX 402 G+ P + +G T + +Q G+G T ++ + + Sbjct: 151 GSTQPTQTIEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGSDSTLVA 210 Query: 403 XXFGATSTFGQPSAP--AFGATSTGAFGQQSTPAFGAT 510 +G+T T G+ S+ +G+T TG G T +G+T Sbjct: 211 G-YGSTQTAGEESSQMAGYGSTQTGMKGSDLTAGYGST 247
>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1154 Score = 31.2 bits (69), Expect = 1.7 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 284 PTPSGPNRALASPAPPTTIPSHSNPS 361 P P+GP A +PAP T P+H +P+ Sbjct: 250 PAPAGPAPAGPAPAPETNAPNHPSPA 275
>TMG4_HUMAN (Q9BZD6) Transmembrane gamma-carboxyglutamic acid protein 4| precursor (Proline-rich Gla protein 4) (Proline-rich gamma-carboxyglutamic acid protein 4) Length = 226 Score = 31.2 bits (69), Expect = 1.7 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Frame = +2 Query: 212 INQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTT----IPSHSNPSA 364 + PCS+ G H P+++ RR P A SP PP+ +PS+ A Sbjct: 146 LQHPCSSAVYERGRHTPSIIFRR------PEEAALSPLPPSVEDAGLPSYEQAVA 194
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 31.2 bits (69), Expect = 1.7 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Frame = +1 Query: 232 ANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXXF 411 A+N + Q + +G T P QG+ Q ++ P+ + + Sbjct: 2 ASNDYTQQATQSYGAYPTQP---GQGYSQQ---SSQPYGQQSYSGYSQSTD--------- 46 Query: 412 GATSTFGQPSAPAFGATSTGAFGQQSTP-AFGAT 510 TS +GQ S ++G + +G QSTP +G+T Sbjct: 47 --TSGYGQSSYSSYGQSQNTGYGTQSTPQGYGST 78
>ESAM_HUMAN (Q96AP7) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 30.8 bits (68), Expect = 2.3 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +2 Query: 254 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNP 358 H P G PTPS ++AL SP PTT +H P Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQP 357
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 30.8 bits (68), Expect = 2.3 Identities = 27/108 (25%), Positives = 36/108 (33%) Frame = +1 Query: 178 IXXXXXXXXXXXQPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKP 357 + QP +FGA Q+SA+ F + F + P TT F+ Sbjct: 825 VSTTTSTATAASQPFLFGAP----QASAASFTPAMGSIFQFGKPPALPTTTTVTTFSQSL 880 Query: 358 FXXXXXXXXXXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAF 501 FG+T SAPA + T F STP F Sbjct: 881 PTAVPTATSSSAADFSGFGSTLA---TSAPATSSQPTLTFSNTSTPTF 925
>NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)| Length = 430 Score = 30.8 bits (68), Expect = 2.3 Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 1/91 (1%) Frame = +1 Query: 226 FGANNP-FGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXX 402 FG N G +S S FG TS FG P ++ P + P Sbjct: 65 FGTNTGNTGNTSISAFGNTSNA--AKPSAFGAPAFGSSAPINVNPPST------------ 110 Query: 403 XXFGATSTFGQPSAPAFGATSTGAFGQQSTP 495 TS FG AP+FG+T GA S P Sbjct: 111 -----TSAFG---APSFGSTGFGAMAATSNP 133
>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)| Length = 244 Score = 30.4 bits (67), Expect = 3.0 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +2 Query: 251 SHLPALLGRRQPTPSGPNRA--LASPAPPTTIPSHSNPSAA 367 S P L +QP+P P + + SPA PTTIPS P++A Sbjct: 17 SQQPFLQQPQQPSPQ-PQQVVQIISPATPTTIPSAGKPTSA 56
>UBAP1_RAT (Q5XIS7) Ubiquitin-associated protein 1 (UBAP)| Length = 502 Score = 30.0 bits (66), Expect = 3.9 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +2 Query: 227 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPS 346 SAL ++SG+ +PAL + P+ S + +PP+T P+ Sbjct: 322 SALNLNSGTEVPALTSSQMPSLSILSVCTEESSPPSTCPT 361
>UBAP1_HUMAN (Q9NZ09) Ubiquitin-associated protein 1 (UBAP)| Length = 502 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +2 Query: 227 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNPS 361 SAL + SG+ +PAL + P+ S + +PP T P+ + P+ Sbjct: 322 SALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGPTVTPPN 366
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 30.0 bits (66), Expect = 3.9 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = +2 Query: 278 RQPTPSGPNRALASP-APPTTIPSHSNPS 361 RQP P +RA+++P APP IP S P+ Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPA 402
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +2 Query: 218 QPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNP 358 +P S +T+ + +H P+ L T GP+ L P+PP+ + S P Sbjct: 438 RPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIPASEP 484
>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein homolog) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 960 Score = 30.0 bits (66), Expect = 3.9 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 281 QPTPSGPNRALASPAPPTTIP 343 +P P GP R + P PPT IP Sbjct: 124 EPHPEGPQRLRSDPGPPTEIP 144
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 29.6 bits (65), Expect = 5.0 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 290 PSGPNRALASPAPPTTIPSHSNPS 361 PSGP A +PAP T P+H +P+ Sbjct: 246 PSGPAPAGPAPAPETNAPNHPSPA 269
>ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18| Length = 635 Score = 29.6 bits (65), Expect = 5.0 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Frame = +1 Query: 220 AMFGANNPFGQSSASP-----FGQTSTNPFGTQQGFGQPCTTNNNPF 345 ++ A NP G+ P F Q + NP G Q+ Q CT NNPF Sbjct: 494 SLVSAENPGGEMQCDPQLLGGFMQ-NVNPLGGQKWEQQNCTMLNNPF 539
>STF1_HORSE (Q9GKL2) Steroidogenic factor 1 (STF-1) (SF-1)| Length = 461 Score = 29.6 bits (65), Expect = 5.0 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +2 Query: 248 GSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNPSA 364 G H+P G P+GP +PA P +PS + P A Sbjct: 143 GLHVPEPKGLASGPPAGPLGDFGAPALPMAVPSTNGPLA 181
>YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I| Length = 1325 Score = 29.6 bits (65), Expect = 5.0 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Frame = +1 Query: 214 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQG---FGQPCTTNNNPFALKPFXXXXXXXX 384 Q + FG N FGQ+++ G ++ G + FGQP T P +P Sbjct: 484 QSSAFG-NFKFGQATSFDKGLSTDASSGAKSNTPVFGQPSTFGQAPVFGQP--------- 533 Query: 385 XXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAFG 504 FG FGQPSA + S G FG Sbjct: 534 ------SAFGQAPVFGQPSAFGQSSFSFGTSNMNQKLDFG 567
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 226 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKP 357 F +N GQ ++P + NPF + QG GQ + +N P P Sbjct: 162 FASNQGMGQRPSAP--RPGNNPFSSSQGMGQRPSPSNIPRPAPP 203
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 29.6 bits (65), Expect = 5.0 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 281 QPTPSGPNRALASPAPPTTIPS 346 +P P GP R + P PPT PS Sbjct: 124 EPHPEGPQRLRSDPGPPTETPS 145
>FOXB1_HUMAN (Q99853) Forkhead box protein B1 (Transcription factor FKH-5)| Length = 324 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +2 Query: 221 PCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNPS 361 P L +G LPA+ +PTP+ A PAP T+ S+S PS Sbjct: 243 PLKPLCHAAGQTLPAIPVPIKPTPAAVPALPALPAPIPTLLSNSPPS 289
>ICEN_PANAN (Q47879) Ice nucleation protein inaU| Length = 1034 Score = 29.3 bits (64), Expect = 6.6 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Frame = +1 Query: 214 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPCTTNNNPFALKPFXXXXXXX 381 Q A +G+ + S G ST G G+G T + +L Sbjct: 416 QTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDS-SLTAGYGSTQTA 474 Query: 382 XXXXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPAFGAT 510 +G+TST G S+ +G+T T +G T +G+T Sbjct: 475 QKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGST 519 Score = 29.3 bits (64), Expect = 6.6 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Frame = +1 Query: 229 GANNPFGQSSASPFGQTSTNPFGTQ--QGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXX 402 G+ P + +G T + +Q G+G T ++ + + Sbjct: 151 GSTQPTQTIEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGSDSTLVA 210 Query: 403 XXFGATSTFGQPSAP--AFGATSTGAFGQQSTPAFGAT 510 +G+T T G+ S+ +G+T TG G T +G+T Sbjct: 211 G-YGSTQTAGEESSQMAGYGSTQTGMKGSDLTAGYGST 247
>FOXB1_MOUSE (Q64732) Forkhead box protein B1 (Transcription factor FKH-5)| Length = 325 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +2 Query: 221 PCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNPS 361 P L +G LPA+ +PTP+ A PAP T+ S+S PS Sbjct: 244 PLKPLCHAAGQTLPAIPVPIKPTPAAVPALPALPAPIPTLLSNSPPS 290
>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag| polyprotein) [Contains: Matrix protein; Capsid protein] Length = 469 Score = 29.3 bits (64), Expect = 6.6 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = +2 Query: 203 ATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNPSAA 367 ++ +++P AL + LPA L P SGP A P PPT S +NP A+ Sbjct: 118 SSPLSEPPEALALPP---LPAALPPPYPGSSGPTPT-APPLPPTPPSSPANPPAS 168
>GLTA_WHEAT (P10385) Glutenin, low molecular weight subunit precursor| Length = 356 Score = 29.3 bits (64), Expect = 6.6 Identities = 21/89 (23%), Positives = 26/89 (29%), Gaps = 2/89 (2%) Frame = +1 Query: 241 PFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXXXXFGAT 420 PF Q PF Q +PF QQ PF+ +P F Sbjct: 37 PFSQQQQPPFSQQQQSPFSQQQQQPPFAQQQQPPFSQQPPISQQQQPPFSQQQQPQFSQQ 96 Query: 421 S--TFGQPSAPAFGATSTGAFGQQSTPAF 501 + Q P + F QQ P F Sbjct: 97 QQPPYSQQQQPPYSQQQQPPFSQQQQPPF 125
>ICEN_ENTAG (P16239) Ice nucleation protein| Length = 1258 Score = 29.3 bits (64), Expect = 6.6 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Frame = +1 Query: 214 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPCTTNNNPFALKPFXXXXXXX 381 Q A +G+ + S G ST G G+G T + +L Sbjct: 416 QTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDS-SLTAGYGSTQTA 474 Query: 382 XXXXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPAFGAT 510 +G+TST G S+ +G+T T +G T +G+T Sbjct: 475 QKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGST 519 Score = 29.3 bits (64), Expect = 6.6 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Frame = +1 Query: 229 GANNPFGQSSASPFGQTSTNPFGTQ--QGFGQPCTTNNNPFALKPFXXXXXXXXXXXXXX 402 G+ P + +G T + +Q G+G T ++ + + Sbjct: 151 GSTQPTQTIEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVA 210 Query: 403 XXFGATSTFGQPSAP--AFGATSTGAFGQQSTPAFGAT 510 +G+T T G+ S+ +G+T TG G T +G+T Sbjct: 211 G-YGSTQTAGEESSQMAGYGSTQTGMKGSDLTAGYGST 247
>COBQ_BACFR (Q64TD9) Cobyric acid synthase| Length = 495 Score = 29.3 bits (64), Expect = 6.6 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = +1 Query: 217 PAMFGANNPFGQSSASPFGQTSTNPFGTQ-QGFGQPCTTNNNPFALKP 357 PA F A N S A+P G Q + G PC T+ NP LKP Sbjct: 37 PAPFKAQNMALNSYATPEGLEIGRAQAVQAEAAGVPCHTDMNPLLLKP 84
>EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1)| (Intersectin-EH-binding protein 1) (Ibp1) Length = 566 Score = 28.9 bits (63), Expect = 8.6 Identities = 17/42 (40%), Positives = 19/42 (45%) Frame = +1 Query: 232 ANNPFGQSSASPFGQTSTNPFGTQQGFGQPCTTNNNPFALKP 357 A+NPF S A P G + TNPF P T N L P Sbjct: 490 ASNPFLPSGAPPTGPSVTNPFQP----APPATLTLNQLRLSP 527
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +2 Query: 218 QPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNP 358 +P S + + + +H P+ L T GP+ L P+PP+ + S P Sbjct: 438 RPSSPVAVAALAHPPSGLHPAPSTAPGPHAPLMPPSPPSQVLPASEP 484
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.9 bits (63), Expect = 8.6 Identities = 20/52 (38%), Positives = 24/52 (46%) Frame = +2 Query: 203 ATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHSNP 358 ATT PC PA L R TP+GP R SP+ +TI S+ P Sbjct: 1377 ATTAMAPC-----------PASLPRGYMTPAGPER---SPSTSSTIHSYGQP 1414 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.128 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,404,731 Number of Sequences: 219361 Number of extensions: 988041 Number of successful extensions: 3671 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 3109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3617 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
