ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl21a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase... 31 1.6
2RV167_YEAST (P39743) Reduced viability upon starvation protein 167 31 1.6
3Y245_TREPA (O83273) Hypothetical protein TP0245 30 3.5
4S26A1_HUMAN (Q9H2B4) Sulfate anion transporter 1 (SAT-1) (Solute... 30 4.6

>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor|
           [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase)
           (Cellobiase); Beta-xylosidase (EC 3.2.1.37)
           (1,4-beta-D-xylan xylohydrolase) (Xylan
           1,4-beta-xylosidase)]
          Length = 654

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +2

Query: 359 ASARARDLVSRLTLAEKVGFLVN 427
           A+ RA DLVSR+TLAEK G +++
Sbjct: 65  AAERAADLVSRMTLAEKAGVMMH 87



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>RV167_YEAST (P39743) Reduced viability upon starvation protein 167|
          Length = 482

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 31/113 (27%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
 Frame = +2

Query: 8   RRKQSLATAV--PVTGXXXXXXXXXXXXXXXXLYIASTSASASPQGRGEPEHARSHASQP 181
           RRK  +ATA   PV+G                 Y  +T+ S +P G G    A S+A+QP
Sbjct: 288 RRKYGVATAEGSPVSGASSGVGYGAG-------YDPATATSPTPTGYGYGAAAPSYAAQP 340

Query: 182 AAMXXXXXXXXXXXXXXXXXXXXWWGGNAGTAEAQAPVFACDASNATLAAYGF 340
           AA                       G  AG      P +A  A +  L   GF
Sbjct: 341 AAQYGTAAAVGTAAAVGTAA-----GAAAGAVPGTYPQYAA-AQSPPLTGLGF 387



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>Y245_TREPA (O83273) Hypothetical protein TP0245|
          Length = 1151

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -1

Query: 465 YAGMPSRPSAGCLFTRNPTFSASVSRDTRSLARADAVAFR 346
           + G   R S+G +F + P+ SA++ R   SLAR DAV  R
Sbjct: 211 WLGEVERVSSG-VFAQTPSVSAALERIATSLARGDAVLLR 249



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>S26A1_HUMAN (Q9H2B4) Sulfate anion transporter 1 (SAT-1) (Solute carrier family|
           26 member 1)
          Length = 701

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = -3

Query: 481 LGPPLVRRDAQPAQRRLLVHQEPHLLRQRQPRHQVPG 371
           L  PL+   A  A   +L  Q  HLL  R PRHQ PG
Sbjct: 207 LSQPLLDGFAMGASVTILTSQLKHLLGVRIPRHQGPG 243


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,224,880
Number of Sequences: 219361
Number of extensions: 534782
Number of successful extensions: 2194
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2193
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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