ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl21a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY029259.1| Hordeum vulgare alpha-L-arabinofuranosidase/beta-D-xylosidase isoenzyme ARA-I mRNA, complete cds Length = 2647 Score = 599 bits (302), Expect = e-168 Identities = 341/354 (96%), Gaps = 10/354 (2%) Strand = Plus / Plus Query: 149 ccagagcacgcacgctcgcacgctagccagccagc----agcaatggcgacggcggcgcg 204 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 ccagagcacgcacgctcgcacgctagccagccagccagcagcaatggcgacggcggcgcg 60 Query: 205 cccaccgttcctggccatggccgcggcggcgctgctggtggcggcgtggtggggcggcaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cccaccgttcctggccatggccgcggcggcgctgctggtggcggcgtggtggggcggcaa 120 Query: 265 tgcggggacggcggaggcgcag------gcgccggtgttcgcgtgcgacgcgtcgaacgc 318 ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 121 tgcgggggcggcggaggcgcaggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgc 180 Query: 319 gacgctggcggcctacgggttctgcaaccggaaggcgacggcgtcggcgcgcgccaggga 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gacgctggcggcctacgggttctgcaaccggaaggcgacggcgtcggcgcgcgccaggga 240 Query: 379 cctggtgtcgcggctgacgctggcggagaaggtggggttcctggtgaacaagcagccggc 438 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctagtgtcgcggctgacgctggcggagaaggtggggttcctggtgaacaagcagccggc 300 Query: 439 gctgggccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 301 gctgggccggctgggcatcccggcgtacgagtggtggtccgaagcgctgcacgg 354
>ref|XM_474061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2298 Score = 194 bits (98), Expect = 2e-46 Identities = 187/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 280 ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 339 ||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||| Sbjct: 75 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 134 Query: 340 ctgcaaccggaaggcga-cggcgtcggcgcgcgccagggacctggtgtcgcggctgacgc 398 |||| |||||| | || | ||| ||||||| || ||||||| || | ||||||||| Sbjct: 135 ctgcgaccggacgaagagcagcg-cggcgcgggcggcggacctgctggggaggctgacgc 193 Query: 399 tggcggagaaggtggggttcctggtgaacaagcagccggcgctgggccggctgggcatcc 458 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 194 tggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcc 253 Query: 459 cggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||||||||||||| |||||||||||||| Sbjct: 254 cggcgtacgagtggtggtcggaggcgctgcacgg 287
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 194 bits (98), Expect = 2e-46 Identities = 187/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 280 ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 339 ||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||| Sbjct: 148294 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 148235 Query: 340 ctgcaaccggaaggcga-cggcgtcggcgcgcgccagggacctggtgtcgcggctgacgc 398 |||| |||||| | || | ||| ||||||| || ||||||| || | ||||||||| Sbjct: 148234 ctgcgaccggacgaagagcagcg-cggcgcgggcggcggacctgctggggaggctgacgc 148176 Query: 399 tggcggagaaggtggggttcctggtgaacaagcagccggcgctgggccggctgggcatcc 458 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 148175 tggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcc 148116 Query: 459 cggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||||||||||||| |||||||||||||| Sbjct: 148115 cggcgtacgagtggtggtcggaggcgctgcacgg 148082
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 194 bits (98), Expect = 2e-46 Identities = 187/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 280 ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 339 ||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||| Sbjct: 24581 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 24522 Query: 340 ctgcaaccggaaggcga-cggcgtcggcgcgcgccagggacctggtgtcgcggctgacgc 398 |||| |||||| | || | ||| ||||||| || ||||||| || | ||||||||| Sbjct: 24521 ctgcgaccggacgaagagcagcg-cggcgcgggcggcggacctgctggggaggctgacgc 24463 Query: 399 tggcggagaaggtggggttcctggtgaacaagcagccggcgctgggccggctgggcatcc 458 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 24462 tggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcc 24403 Query: 459 cggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||||||||||||| |||||||||||||| Sbjct: 24402 cggcgtacgagtggtggtcggaggcgctgcacgg 24369
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 194 bits (98), Expect = 2e-46 Identities = 187/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 280 ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 339 ||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||| Sbjct: 32629560 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 32629501 Query: 340 ctgcaaccggaaggcga-cggcgtcggcgcgcgccagggacctggtgtcgcggctgacgc 398 |||| |||||| | || | ||| ||||||| || ||||||| || | ||||||||| Sbjct: 32629500 ctgcgaccggacgaagagcagcg-cggcgcgggcggcggacctgctggggaggctgacgc 32629442 Query: 399 tggcggagaaggtggggttcctggtgaacaagcagccggcgctgggccggctgggcatcc 458 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 32629441 tggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcc 32629382 Query: 459 cggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||||||||||||| |||||||||||||| Sbjct: 32629381 cggcgtacgagtggtggtcggaggcgctgcacgg 32629348 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 352 ggcgacggcgtcggcgcgcgccagg 376 |||||||||||||||| |||||||| Sbjct: 1768015 ggcgacggcgtcggcgagcgccagg 1767991
>dbj|AK101782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065A06, full insert sequence Length = 2821 Score = 194 bits (98), Expect = 2e-46 Identities = 187/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 280 ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 339 ||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||| Sbjct: 243 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 302 Query: 340 ctgcaaccggaaggcga-cggcgtcggcgcgcgccagggacctggtgtcgcggctgacgc 398 |||| |||||| | || | ||| ||||||| || ||||||| || | ||||||||| Sbjct: 303 ctgcgaccggacgaagagcagcg-cggcgcgggcggcggacctgctggggaggctgacgc 361 Query: 399 tggcggagaaggtggggttcctggtgaacaagcagccggcgctgggccggctgggcatcc 458 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 362 tggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcc 421 Query: 459 cggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||||||||||||| |||||||||||||| Sbjct: 422 cggcgtacgagtggtggtcggaggcgctgcacgg 455
>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete sequence Length = 50928 Score = 194 bits (98), Expect = 2e-46 Identities = 187/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 280 ggcgcaggcgccggtgttcgcgtgcgacgcgtcgaacgcgacgctggcggcctacgggtt 339 ||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||| Sbjct: 2990 ggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggtt 2931 Query: 340 ctgcaaccggaaggcga-cggcgtcggcgcgcgccagggacctggtgtcgcggctgacgc 398 |||| |||||| | || | ||| ||||||| || ||||||| || | ||||||||| Sbjct: 2930 ctgcgaccggacgaagagcagcg-cggcgcgggcggcggacctgctggggaggctgacgc 2872 Query: 399 tggcggagaaggtggggttcctggtgaacaagcagccggcgctgggccggctgggcatcc 458 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 2871 tggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcc 2812 Query: 459 cggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||||||||||||| |||||||||||||| Sbjct: 2811 cggcgtacgagtggtggtcggaggcgctgcacgg 2778
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 65.9 bits (33), Expect = 1e-07 Identities = 98/117 (83%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 377 gacctggtgtcgcggctgacgctggcggagaaggtggggttcctggtgaacaa-gcagcc 435 ||||||||| |||||||||||| || ||||||||| || | ||||||||||| || ||| Sbjct: 48395 gacctggtggcgcggctgacgcgcgccgagaaggtgcggctgctggtgaacaacgccgcc 48336 Query: 436 ggcgctgggccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||| || ||||||||| || | | ||||||||||||||| |||||||| ||||| Sbjct: 48335 ggcg-tgccgcggctgggcgtcgccgggtacgagtggtggtcggaggcgctccacgg 48280
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 98/117 (83%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 377 gacctggtgtcgcggctgacgctggcggagaaggtggggttcctggtgaacaa-gcagcc 435 ||||||||| |||||||||||| || ||||||||| || | ||||||||||| || ||| Sbjct: 26347093 gacctggtggcgcggctgacgcgcgccgagaaggtgcggctgctggtgaacaacgccgcc 26347034 Query: 436 ggcgctgggccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||| || ||||||||| || | | ||||||||||||||| |||||||| ||||| Sbjct: 26347033 ggcg-tgccgcggctgggcgtcgccgggtacgagtggtggtcggaggcgctccacgg 26346978 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 446 cggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 10871773 cggctgggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 10871819 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 447 ggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||| ||||||| |||| |||||||||| |||||||||||||| Sbjct: 10834644 ggctggggatcccggtgtacaagtggtggtcggaggcgctgcacgg 10834689 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||||||||||||||| |||||||||||||| Sbjct: 10514781 ggacctggtgtcgcggctgacggcggcggagaaggtgg 10514744 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 446 cggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||| | |||||||||||||||||||| |||| ||| ||||| Sbjct: 10481799 cggctgggcgtgccggcgtacgagtggtggtcggaggggctccacgg 10481753 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcgt 251 ||||||||||||||||||||||||| Sbjct: 16690627 gcggcggcgctgctggtggcggcgt 16690651 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgggg 415 |||||||||| || |||||||| |||||||||||||||| Sbjct: 10834573 ggacctggtggcgaggctgacgacggcggagaaggtgggg 10834612 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||| || |||||||| |||||||||||||| Sbjct: 10871703 ggacctggtggcgaggctgacggcggcggagaaggtgg 10871740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 ctggccatggccgcggcggcg 235 ||||||||||||||||||||| Sbjct: 18561980 ctggccatggccgcggcggcg 18561960 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 458 ccggcgtacgagtggtggtccgaggcgctgca 489 ||||||||| ||||||||| ||||||||||| Sbjct: 27860194 ccggcgtacaggtggtggtcggaggcgctgca 27860225 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 gccatggccgcggcggcgctgctggtgg 245 ||||| ||||||||||||||| |||||| Sbjct: 14977058 gccatcgccgcggcggcgctggtggtgg 14977085
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 98/117 (83%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 377 gacctggtgtcgcggctgacgctggcggagaaggtggggttcctggtgaacaa-gcagcc 435 ||||||||| |||||||||||| || ||||||||| || | ||||||||||| || ||| Sbjct: 26660821 gacctggtggcgcggctgacgcgcgccgagaaggtgcggctgctggtgaacaacgccgcc 26660762 Query: 436 ggcgctgggccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||| || ||||||||| || | | ||||||||||||||| |||||||| ||||| Sbjct: 26660761 ggcg-tgccgcggctgggcgtcgccgggtacgagtggtggtcggaggcgctccacgg 26660706 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 446 cggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 10950962 cggctgggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 10951008 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 447 ggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||| ||||||| |||| |||||||||| |||||||||||||| Sbjct: 10913833 ggctggggatcccggtgtacaagtggtggtcggaggcgctgcacgg 10913878 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||||||||||||||| |||||||||||||| Sbjct: 10586325 ggacctggtgtcgcggctgacggcggcggagaaggtgg 10586288 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 446 cggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||| | |||||||||||||||||||| |||| ||| ||||| Sbjct: 10553343 cggctgggcgtgccggcgtacgagtggtggtcggaggggctccacgg 10553297 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcgt 251 ||||||||||||||||||||||||| Sbjct: 16784450 gcggcggcgctgctggtggcggcgt 16784474 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgggg 415 |||||||||| || |||||||| |||||||||||||||| Sbjct: 10913762 ggacctggtggcgaggctgacgacggcggagaaggtgggg 10913801 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||| || |||||||| |||||||||||||| Sbjct: 10950892 ggacctggtggcgaggctgacggcggcggagaaggtgg 10950929 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 ctggccatggccgcggcggcg 235 ||||||||||||||||||||| Sbjct: 18721381 ctggccatggccgcggcggcg 18721361 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 458 ccggcgtacgagtggtggtccgaggcgctgca 489 ||||||||| ||||||||| ||||||||||| Sbjct: 27884182 ccggcgtacaggtggtggtcggaggcgctgca 27884213 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 gccatggccgcggcggcgctgctggtgg 245 ||||| ||||||||||||||| |||||| Sbjct: 15058753 gccatcgccgcggcggcgctggtggtgg 15058780
>gb|AY029260.1| Hordeum vulgare beta-D-xylosidase mRNA, complete cds Length = 2546 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 445 ccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||||||||| | ||||||||| |||||||||| |||||||||||||| Sbjct: 282 ccggctgggcgtgccggcgtacaagtggtggtcggaggcgctgcacgg 329
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14, complete sequence Length = 121894 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 446 cggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 61293 cggctgggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 61339 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 447 ggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||| ||||||| |||| |||||||||| |||||||||||||| Sbjct: 24164 ggctggggatcccggtgtacaagtggtggtcggaggcgctgcacgg 24209 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgggg 415 |||||||||| || |||||||| |||||||||||||||| Sbjct: 24093 ggacctggtggcgaggctgacgacggcggagaaggtgggg 24132 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||| || |||||||| |||||||||||||| Sbjct: 61223 ggacctggtggcgaggctgacggcggcggagaaggtgg 61260
>dbj|AK109882.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D05, full insert sequence Length = 2714 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 446 cggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 316 cggctgggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 362 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||| || |||||||| |||||||||||||| Sbjct: 246 ggacctggtggcgaggctgacggcggcggagaaggtgg 283
>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0051D22, complete sequence Length = 119919 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||||||||||||||| |||||||||||||| Sbjct: 86145 ggacctggtgtcgcggctgacggcggcggagaaggtgg 86182 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 446 cggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||| | |||||||||||||||||||| |||| ||| ||||| Sbjct: 119127 cggctgggcgtgccggcgtacgagtggtggtcggaggggctccacgg 119173
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10 map E20933S, complete sequence Length = 146118 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||||||||||||||| |||||||||||||| Sbjct: 138627 ggacctggtgtcgcggctgacggcggcggagaaggtgg 138590 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 446 cggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||||| | |||||||||||||||||||| |||| ||| ||||| Sbjct: 105645 cggctgggcgtgccggcgtacgagtggtggtcggaggggctccacgg 105599
>dbj|AK108558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A01, full insert sequence Length = 1199 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgg 413 |||||||||||||||||||||| |||||||||||||| Sbjct: 202 ggacctggtgtcgcggctgacggcggcggagaaggtgg 239
>dbj|AK070171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O20, full insert sequence Length = 2515 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 447 ggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 ||||||| ||||||| |||| |||||||||| |||||||||||||| Sbjct: 303 ggctggggatcccggtgtacaagtggtggtcggaggcgctgcacgg 348 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 376 ggacctggtgtcgcggctgacgctggcggagaaggtgggg 415 |||||||||| || |||||||| |||||||||||||||| Sbjct: 232 ggacctggtggcgaggctgacgacggcggagaaggtgggg 271
>ref|XM_467832.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2628 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 445 ccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||||| ||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 287 ccggctcggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 334 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 377 gacctggtgtcgcggctgacgctggcggagaag 409 ||||| |||||| |||||||||||| ||||||| Sbjct: 219 gacctcgtgtcgaggctgacgctggaggagaag 251
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 445 ccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||||| ||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 31632376 ccggctcggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 31632329 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 377 gacctggtgtcgcggctgacgctggcggagaag 409 ||||| |||||| |||||||||||| ||||||| Sbjct: 31632444 gacctcgtgtcgaggctgacgctggaggagaag 31632412 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcggaggcgcaggcgccgg 293 |||||||||||||||||||| Sbjct: 23532574 ggcggaggcgcaggcgccgg 23532593 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggcggcgtggtggggcggca 263 |||||||||||||||||||| Sbjct: 896252 ggcggcgtggtggggcggca 896271
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 445 ccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||||| ||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 122936 ccggctcggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 122889 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 377 gacctggtgtcgcggctgacgctggcggagaag 409 ||||| |||||| |||||||||||| ||||||| Sbjct: 123004 gacctcgtgtcgaggctgacgctggaggagaag 122972
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 445 ccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||||| ||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 12163 ccggctcggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 12116 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 377 gacctggtgtcgcggctgacgctggcggagaag 409 ||||| |||||| |||||||||||| ||||||| Sbjct: 12231 gacctcgtgtcgaggctgacgctggaggagaag 12199
>dbj|AK119887.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-H05, full insert sequence Length = 2628 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 445 ccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||||| ||| ||||||||||| |||||||||| |||||||| ||||| Sbjct: 287 ccggctcggcgtcccggcgtacaagtggtggtcggaggcgctccacgg 334 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 377 gacctggtgtcgcggctgacgctggcggagaag 409 ||||| |||||| |||||||||||| ||||||| Sbjct: 219 gacctcgtgtcgaggctgacgctggaggagaag 251
>ref|XM_364140.1| Magnaporthe grisea 70-15 hypothetical protein (MG08985.4) partial mRNA Length = 2379 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 458 ccggcgtacgagtggtggtccgaggcgctgcacgg 492 |||||||| ||||||||||||||||| |||||||| Sbjct: 238 ccggcgtatgagtggtggtccgaggccctgcacgg 272
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcgt 251 ||||||||||||||||||||||||| Sbjct: 71741 gcggcggcgctgctggtggcggcgt 71765
>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22, complete sequence Length = 156725 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcgt 251 ||||||||||||||||||||||||| Sbjct: 6242 gcggcggcgctgctggtggcggcgt 6266
>dbj|AK108872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-C10, full insert sequence Length = 1378 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcgt 251 ||||||||||||||||||||||||| Sbjct: 129 gcggcggcgctgctggtggcggcgt 153
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcgg 248 |||||||||||||||||||||| Sbjct: 1635785 gcggcggcgctgctggtggcgg 1635806 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gcggcgctgctggtggcggc 249 |||||||||||||||||||| Sbjct: 3493277 gcggcgctgctggtggcggc 3493258
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 ccgcggcggcgctgctggtggc 246 |||||||||||||||||||||| Sbjct: 2240842 ccgcggcggcgctgctggtggc 2240863
>ref|XM_957977.1| Neurospora crassa OR74A hypothetical protein (NCU05708.1) partial mRNA Length = 2898 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 ggcaatgcggggacggcggagg 281 |||||||||||||||||||||| Sbjct: 790 ggcaatgcggggacggcggagg 811
>ref|XM_325562.1| Neurospora crassa OR74A hypothetical protein (NCU05708.1) partial mRNA Length = 2898 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 ggcaatgcggggacggcggagg 281 |||||||||||||||||||||| Sbjct: 790 ggcaatgcggggacggcggagg 811
>gb|AY484967.1|AY484967S1 Homo sapiens type XVIII collagen gene, exons 1 and 2 Length = 1598 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 cctggccatggccgcggcggcg 235 |||||||||||||||||||||| Sbjct: 1481 cctggccatggccgcggcggcg 1502
>ref|NM_130445.1| Homo sapiens collagen, type XVIII, alpha 1 (COL18A1), transcript variant 2, mRNA Length = 5398 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 cctggccatggccgcggcggcg 235 |||||||||||||||||||||| Sbjct: 66 cctggccatggccgcggcggcg 87
>gb|AY328853.1| Vibrio parahaemolyticus phage VP16C, partial sequence Length = 47537 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcgg 248 |||||||||||||||||||||| Sbjct: 9559 gcggcggcgctgctggtggcgg 9580
>gb|BC063833.1| Homo sapiens collagen, type XVIII, alpha 1, transcript variant 2, mRNA (cDNA clone MGC:74745 IMAGE:6181818), complete cds Length = 4230 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 cctggccatggccgcggcggcg 235 |||||||||||||||||||||| Sbjct: 52 cctggccatggccgcggcggcg 73
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 229 ggcggcgctgctggtggcggcgtggt 254 |||||||||||||||||||| ||||| Sbjct: 199094 ggcggcgctgctggtggcggtgtggt 199069 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 ggcgacggcgtcggcgcgcgc 372 ||||||||||||||||||||| Sbjct: 1575787 ggcgacggcgtcggcgcgcgc 1575767 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gccatggccgcggcggcgct 237 |||||||||||||||||||| Sbjct: 4454583 gccatggccgcggcggcgct 4454602 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ggcgacggcgtcggcgcgcg 371 |||||||||||||||||||| Sbjct: 1259966 ggcgacggcgtcggcgcgcg 1259985
>dbj|AK130835.1| Homo sapiens cDNA FLJ27325 fis, clone TMS08226, highly similar to Collagen alpha 1(XVIII) chain precursor Length = 1388 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 cctggccatggccgcggcggcg 235 |||||||||||||||||||||| Sbjct: 106 cctggccatggccgcggcggcg 127
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 cctggccatggccgcggcggcg 235 |||||||||||||||||||||| Sbjct: 104155 cctggccatggccgcggcggcg 104176
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 223 ggccgcggcggcgctgctggtg 244 |||||||||||||||||||||| Sbjct: 3914442 ggccgcggcggcgctgctggtg 3914463 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ggccgcggcggcgctgctgg 242 |||||||||||||||||||| Sbjct: 4742001 ggccgcggcggcgctgctgg 4742020
>gb|AF018082.1|AF018082 Homo sapiens type XVIII collagen (COL18A1) mRNA, alternatively spliced, short form, complete cds Length = 5408 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 cctggccatggccgcggcggcg 235 |||||||||||||||||||||| Sbjct: 76 cctggccatggccgcggcggcg 97
>emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid LL21NC02-21A1 map 21q22.3 region D21S171-LA161, complete sequence Length = 45600 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 cctggccatggccgcggcggcg 235 |||||||||||||||||||||| Sbjct: 22619 cctggccatggccgcggcggcg 22640
>emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on chromosome 11, complete sequence Length = 144136 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 154 gcacgcacgctcgcacgctagccagccagc 183 |||||||||| ||||||| ||||||||||| Sbjct: 116207 gcacgcacgcacgcacgccagccagccagc 116236
>ref|XM_471136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ggcgacggcgtcggcgcgcgccagg 376 |||||||||||||||| |||||||| Sbjct: 463 ggcgacggcgtcggcgagcgccagg 487
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 cgtcgaacgcgacgctggcgg 329 ||||||||||||||||||||| Sbjct: 2070828 cgtcgaacgcgacgctggcgg 2070808
>ref|NM_188178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 756 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 aagcctcgccaccgccgtccccgtc 43 ||||| ||||||||||||||||||| Sbjct: 24 aagccacgccaccgccgtccccgtc 48
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 ctggccatggccgcggcggcg 235 ||||||||||||||||||||| Sbjct: 141295 ctggccatggccgcggcggcg 141275
>gb|AY558304.1| Saccharomyces cerevisiae clone FLH111286.01X YHR180W gene, complete cds Length = 492 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gccagtaccagtgccagtgcc 127 ||||||||||||||||||||| Sbjct: 429 gccagtaccagtgccagtgcc 449
>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete sequence Length = 149449 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 352 ggcgacggcgtcggcgcgcgccagg 376 |||||||||||||||| |||||||| Sbjct: 110967 ggcgacggcgtcggcgagcgccagg 110943
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gccagtaccagtgccagtgcc 127 ||||||||||||||||||||| Sbjct: 1079570 gccagtaccagtgccagtgcc 1079590
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 352 ggcgacggcgtcggcgcgcgccagg 376 |||||||||||||||| |||||||| Sbjct: 63282 ggcgacggcgtcggcgagcgccagg 63258
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cagcaatggcgacggcggcgc 203 ||||||||||||||||||||| Sbjct: 17096760 cagcaatggcgacggcggcgc 17096740 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 aagcctcgccaccgccgtccccgtc 43 ||||| ||||||||||||||||||| Sbjct: 13061321 aagccacgccaccgccgtccccgtc 13061345
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 gccatggccgcggcggcgctg 238 ||||||||||||||||||||| Sbjct: 29324790 gccatggccgcggcggcgctg 29324810
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 gccatggccgcggcggcgctg 238 ||||||||||||||||||||| Sbjct: 35671 gccatggccgcggcggcgctg 35691
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 ccgcggcggcgctgctggtggcggc 249 ||||||||||||||||| ||||||| Sbjct: 6358083 ccgcggcggcgctgctgatggcggc 6358107
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 gccatggccgcggcggcgctg 238 ||||||||||||||||||||| Sbjct: 87588 gccatggccgcggcggcgctg 87608
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 aagcctcgccaccgccgtccccgtc 43 ||||| ||||||||||||||||||| Sbjct: 135618 aagccacgccaccgccgtccccgtc 135642
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0571D04 Length = 149302 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cagcaatggcgacggcggcgc 203 ||||||||||||||||||||| Sbjct: 49886 cagcaatggcgacggcggcgc 49866
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 cgcggcggcgctgctggtggcggcg 250 ||||||||||||| ||||||||||| Sbjct: 2947471 cgcggcggcgctggtggtggcggcg 2947447
>dbj|AK064899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L13, full insert sequence Length = 2429 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 gccatggccgcggcggcgctg 238 ||||||||||||||||||||| Sbjct: 1856 gccatggccgcggcggcgctg 1876
>gb|U00028.1|YSCH9186 Saccharomyces cerevisiae chromosome VIII cosmid 9186 Length = 10801 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gccagtaccagtgccagtgcc 127 ||||||||||||||||||||| Sbjct: 1927 gccagtaccagtgccagtgcc 1947
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 cggcgcgcgccagggacctgg 383 ||||||||||||||||||||| Sbjct: 1531109 cggcgcgcgccagggacctgg 1531129
>gb|U46071.1|RCU46071 Rhodobacter capsulatus cytochrome c biogenesis (cycH) gene, complete cds, and sarcosine oxidase gene, partial cds Length = 3164 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 tggccgcggcggcgctgctggtggcggcg 250 |||| |||||||||||| ||||||||||| Sbjct: 1141 tggcggcggcggcgctggtggtggcggcg 1169
>dbj|AB015725.1| Aeromonas caviae gene for aminopeptidase, complete cds Length = 3949 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 ctgcaaccggaaggcgacggcgtcg 364 ||||||||||| ||||||||||||| Sbjct: 2523 ctgcaaccggatggcgacggcgtcg 2547
>gb|AC151752.1| Ornithorhynchus anatinus chromosome UNK clone OABb-503A1, complete sequence Length = 132108 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ggggaggggagagccagagc 155 |||||||||||||||||||| Sbjct: 13182 ggggaggggagagccagagc 13163
>ref|XM_462821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 385 gtcgcggctgacgctggcggagaaggtggggt 416 |||||||| ||||| | ||||||||||||||| Sbjct: 210 gtcgcggcggacgcagccggagaaggtggggt 179
>ref|XM_523965.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC468576), mRNA Length = 2742 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcg 250 ||||||||||||||| |||||||| Sbjct: 2270 gcggcggcgctgctgctggcggcg 2293
>ref|XM_475945.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 ggccatggccgcggcggcgc 236 |||||||||||||||||||| Sbjct: 777 ggccatggccgcggcggcgc 758
>ref|XM_466579.1| Oryza sativa (japonica cultivar-group), mRNA Length = 611 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcggaggcgcaggcgccgg 293 |||||||||||||||||||| Sbjct: 85 ggcggaggcgcaggcgccgg 104
>gb|DQ213429.1| Taeniopygia guttata clone 0058P0001G10 tetratricopeptide repeat domain 1 protein-like mRNA, complete sequence Length = 746 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcg 250 |||||||||||||||| ||||||| Sbjct: 34 gcggcggcgctgctggcggcggcg 57
>ref|XM_463882.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggcggcgtggtggggcggca 263 |||||||||||||||||||| Sbjct: 180 ggcggcgtggtggggcggca 199
>gb|AC147352.2| Xenopus tropicalis clone CH216-157J16, complete sequence Length = 141579 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ggaggggagagccagagcacgcac 161 ||||||||||| |||||||||||| Sbjct: 140930 ggaggggagagacagagcacgcac 140907
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcgacggcggcgcgcccac 209 |||||||||||||||||||| Sbjct: 33973 ggcgacggcggcgcgcccac 33992
>gb|AY599248.1| Homo sapiens downstream of tyrosine kinase 6 (DOK6) mRNA, complete cds Length = 1965 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcg 250 ||||||||||||||| |||||||| Sbjct: 74 gcggcggcgctgctgctggcggcg 97
>gb|AC008200.5| Drosophila melanogaster clone BACR17P04, complete sequence Length = 163686 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 101141 ccagtaccagtgccagtgcc 101122
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcgacggcggcgcgcccac 209 |||||||||||||||||||| Sbjct: 4176277 ggcgacggcggcgcgcccac 4176296
>gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete sequence Length = 166693 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 2163 ccagtaccagtgccagtgcc 2144
>ref|XM_869638.1| PREDICTED: Bos taurus similar to Runt-related transcription factor 3 (Core-binding factor, alpha 3 subunit) (CBF-alpha 3) (Acute myeloid leukemia 2 protein) (Oncogene AML-2) (Polyomavirus enhancer binding protein 2 alpha C subunit) (PEBP2-alpha C) (PEA2-alpha C) (SL3-3 ... (LOC617389), mRNA Length = 1681 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccgcggcggcgctgctggtg 244 |||||||||||||||||||| Sbjct: 1219 ccgcggcggcgctgctggtg 1200
>ref|XM_369035.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00209.4) partial mRNA Length = 13452 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 11126 ccagtaccagtgccagtgcc 11107
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 tgcgacgcgtcgaacgcgacgctggcgg 329 |||| |||||||| |||||||||||||| Sbjct: 43679 tgcggcgcgtcgatcgcgacgctggcgg 43706
>ref|XM_422022.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ11457 (LOC424176), mRNA Length = 4209 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ggcgctgggccggctgggca 455 |||||||||||||||||||| Sbjct: 279 ggcgctgggccggctgggca 298
>ref|NM_001024618.1| Mus musculus cardiomyopathy associated 3 (Cmya3), mRNA Length = 11956 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tggggttcctggtgaacaag 430 |||||||||||||||||||| Sbjct: 9078 tggggttcctggtgaacaag 9059
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggccatggccgcggcggcgc 236 |||||||||||||||||||| Sbjct: 49586 ggccatggccgcggcggcgc 49605
>ref|NM_152721.2| Homo sapiens docking protein 6 (DOK6), mRNA Length = 1965 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcg 250 ||||||||||||||| |||||||| Sbjct: 74 gcggcggcgctgctgctggcggcg 97
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13, complete sequence Length = 176150 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 gccatggccgcggcggcgctgctggtgg 245 ||||| ||||||||||||||| |||||| Sbjct: 86845 gccatcgccgcggcggcgctggtggtgg 86872
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 agcctcgccaccgccgtccc 39 |||||||||||||||||||| Sbjct: 36101384 agcctcgccaccgccgtccc 36101365 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 acgctcgcacgctagccagccagc 183 |||| ||||||||||||||||||| Sbjct: 17574637 acgcacgcacgctagccagccagc 17574660
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 acgctcgcacgctagccagccagc 183 |||| ||||||||||||||||||| Sbjct: 80440 acgcacgcacgctagccagccagc 80417
>gb|AC146155.3| Pan troglodytes BAC clone RP43-37F3 from 7, complete sequence Length = 159409 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 ggcggaggcgcaggcgccgg 293 |||||||||||||||||||| Sbjct: 113967 ggcggaggcgcaggcgccgg 113948
>emb|Z11840.1|DMHDGHOGD D.melanogaster hedgehog gene DNA Length = 19116 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 12038 ccagtaccagtgccagtgcc 12057
>gb|AC123851.4| Mus musculus BAC clone RP23-323K4 from chromosome 16, complete sequence Length = 230221 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 gggaggggagagccagagcacgca 160 |||||||||||| ||||||||||| Sbjct: 124773 gggaggggagagacagagcacgca 124750
>gb|AC005251.1| Homo sapiens BAC clone CTA-324D18 from 7, complete sequence Length = 92636 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcggaggcgcaggcgccgg 293 |||||||||||||||||||| Sbjct: 12483 ggcggaggcgcaggcgccgg 12502
>gb|AY154653.1| Saccharomyces kluyveri pyrimidine regulating protein gene, complete cds Length = 2432 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gccagtaccagtgccagtgc 126 |||||||||||||||||||| Sbjct: 544 gccagtaccagtgccagtgc 563
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cggcgctgctggtggcggcg 250 |||||||||||||||||||| Sbjct: 2944221 cggcgctgctggtggcggcg 2944202
>ref|XM_500185.1| Yarrowia lipolytica CLIB122, YALI0A18007g predicted mRNA Length = 1596 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 tacgggttctgcaaccggaa 351 |||||||||||||||||||| Sbjct: 185 tacgggttctgcaaccggaa 166
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcg 250 |||||| ||||||||||||||||| Sbjct: 363512 gcggcgacgctgctggtggcggcg 363535
>gb|BT009224.1| Triticum aestivum clone wle1n.pk0076.h7:fis, full insert mRNA sequence Length = 1874 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tggccatggccgcggcggcg 235 |||||||||||||||||||| Sbjct: 563 tggccatggccgcggcggcg 544
>emb|Z25774.2|LDMOFA Leptothrix discophora mof operon and flanking genes Length = 9413 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ggcgcaggcgccggtgttcg 299 |||||||||||||||||||| Sbjct: 8524 ggcgcaggcgccggtgttcg 8543
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 agcctcgccaccgccgtccc 39 |||||||||||||||||||| Sbjct: 162895 agcctcgccaccgccgtccc 162876
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcgacggcggcgcgcccac 209 |||||||||||||||||||| Sbjct: 17232 ggcgacggcggcgcgcccac 17251
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 ggcggcgctgctggtggcggcgtg 252 ||||||||||||||||||| |||| Sbjct: 118660 ggcggcgctgctggtggcgtcgtg 118683
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 ggcggcgctgctggtggcggcgtg 252 ||||||||||||||||||| |||| Sbjct: 71282 ggcggcgctgctggtggcgtcgtg 71305
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 ggcggcgctgctggtggcggcgtg 252 ||||||||||||||||||| |||| Sbjct: 337431 ggcggcgctgctggtggcgtcgtg 337454
>gb|BC096744.1| Homo sapiens docking protein 6, mRNA (cDNA clone MGC:104528 IMAGE:5260167), complete cds Length = 1960 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcg 250 ||||||||||||||| |||||||| Sbjct: 69 gcggcggcgctgctgctggcggcg 92
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcgacggcggcgcgcccac 209 |||||||||||||||||||| Sbjct: 54424 ggcgacggcggcgcgcccac 54443
>gb|AY043236.1| Vitis vinifera putative cellulase CEL1 mRNA, partial cds Length = 413 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 agaaggtggggttcctggtg 424 |||||||||||||||||||| Sbjct: 42 agaaggtggggttcctggtg 23
>gb|AF451898.1| Heliothis zea virus 1, complete genome Length = 228089 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 186133 ccagtaccagtgccagtgcc 186152
>emb|AL591113.14| Mouse DNA sequence from clone RP23-253E9 on chromosome 11 Contains a phosphoglycerate mutase (Pgam) family pseudogene, a pseudogene similar to part of chondroitin sulfate proteoglycan 6 Cspg6, the gene for a novel protein similar to human DSCAM-interacting protein 1, a novel gene, the Crlf3 gene for cytokine receptor-like factor 3, the 5' end of a novel gene and a CpG island, complete sequence Length = 204106 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gctagccagccagcagcaat 189 |||||||||||||||||||| Sbjct: 8161 gctagccagccagcagcaat 8142
>gb|AF375756.1| Sus scrofa microsatellite UMNp160 sequence Length = 1219 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ggggaggggagagccagagc 155 |||||||||||||||||||| Sbjct: 812 ggggaggggagagccagagc 793
>gb|AC091694.9| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-316F3, Complete Sequence, complete sequence Length = 213119 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aggggaggggagagccagag 154 |||||||||||||||||||| Sbjct: 3067 aggggaggggagagccagag 3086
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 gctggcggagaaggtggggt 416 |||||||||||||||||||| Sbjct: 2332609 gctggcggagaaggtggggt 2332590
>gb|AE005973.1| Caulobacter crescentus CB15 section 299 of 359 of the complete genome Length = 10123 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gcggcggcgctgctggtggcggcg 250 |||||||||| ||||||||||||| Sbjct: 6648 gcggcggcgccgctggtggcggcg 6625
>gb|AE005930.1| Caulobacter crescentus CB15 section 256 of 359 of the complete genome Length = 11374 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cggcgctgctggtggcggcg 250 |||||||||||||||||||| Sbjct: 8475 cggcgctgctggtggcggcg 8456
>gb|AC026585.9| Homo sapiens, clone RP11-17E3, complete sequence Length = 172798 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcg 250 ||||||||||||||| |||||||| Sbjct: 121462 gcggcggcgctgctgctggcggcg 121485
>gb|DQ323513.1| Sphingomonadaceae bacterium Y2 hypothetical sugar transporter gene, partial cds; beta-peptidyl aminopeptidase precursor (bapA) gene, complete cds; and hypothetical threonine dehydratase gene, partial cds Length = 2403 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cggcgctgctggtggcggcg 250 |||||||||||||||||||| Sbjct: 669 cggcgctgctggtggcggcg 688
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 220 catggccgcggcggcgctgctggtggcg 247 ||||| ||| |||||||||||||||||| Sbjct: 250277 catggtcgccgcggcgctgctggtggcg 250304
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gcggcggcgctgctggtggcggcg 250 |||||||||||| ||||||||||| Sbjct: 351886 gcggcggcgctggtggtggcggcg 351909 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gacgcgtcgaacgcgacgctggcg 328 |||||| ||||||||||||||||| Sbjct: 234592 gacgcggcgaacgcgacgctggcg 234569
>gb|AC005250.1| Homo sapiens BAC clone CTA-318M5 from 7, complete sequence Length = 94336 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aggggaggggagagccagag 154 |||||||||||||||||||| Sbjct: 43735 aggggaggggagagccagag 43754
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gtcgcggctgacgctggcgg 404 |||||||||||||||||||| Sbjct: 2135485 gtcgcggctgacgctggcgg 2135466
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggcgacggcggcgcgcccac 209 |||||||||||||||||||| Sbjct: 111960 ggcgacggcggcgcgcccac 111941
>gb|M69129.1|CCRHFAB Caulobacter crescentus transcriptional activator (hfaA) and hfaB (hfaB) genes, complete cds Length = 1729 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cggcgctgctggtggcggcg 250 |||||||||||||||||||| Sbjct: 30 cggcgctgctggtggcggcg 11
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 217 ggccatggccgcggcggcgctgctggtg 244 ||||| |||| ||||||||||||||||| Sbjct: 13890437 ggccacggccacggcggcgctgctggtg 13890464
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggccatggccgcggcggcgc 236 |||||||||||||||||||| Sbjct: 28730873 ggccatggccgcggcggcgc 28730892 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcgacggcggcgcgcccac 209 |||||||||||||||||||| Sbjct: 2755647 ggcgacggcggcgcgcccac 2755666
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 agcctcgccaccgccgtccc 39 |||||||||||||||||||| Sbjct: 36191458 agcctcgccaccgccgtccc 36191439 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 acgctcgcacgctagccagccagc 183 |||| ||||||||||||||||||| Sbjct: 17568178 acgcacgcacgctagccagccagc 17568201
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 gtcgcggctgacgctggcggagaaggtggggt 416 |||||||| ||||| | ||||||||||||||| Sbjct: 3691496 gtcgcggcggacgcagccggagaaggtggggt 3691527
>gb|DQ011666.1| Mus musculus XIN2 (Xin2) mRNA, complete cds Length = 11956 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tggggttcctggtgaacaag 430 |||||||||||||||||||| Sbjct: 9078 tggggttcctggtgaacaag 9059
>gb|AC009345.7|AC009345 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone BACR28F20, complete sequence Length = 158895 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 147595 ccagtaccagtgccagtgcc 147576
>dbj|AB195230.1| Pyrus pyrifolia PpARF2 mRNA for alpha-L-arabinofuranosidase / beta-D-xylosidase, complete cds Length = 2575 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 gtacgagtggtggtccgaggcgct 486 ||||||||||||||| |||||||| Sbjct: 297 gtacgagtggtggtctgaggcgct 320
>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone BACR14L13, complete sequence Length = 197348 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 50810 ccagtaccagtgccagtgcc 50791
>gb|AC124861.3| Homo sapiens BAC clone RP11-622A18 from 2, complete sequence Length = 153731 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aggggaggggagagccagag 154 |||||||||||||||||||| Sbjct: 91450 aggggaggggagagccagag 91431
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 385 gtcgcggctgacgctggcggagaaggtggggt 416 |||||||| ||||| | ||||||||||||||| Sbjct: 99976 gtcgcggcggacgcagccggagaaggtggggt 100007
>gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence Length = 7479 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gcggcggcgctgctggtggcggcg 250 ||||||||| |||||||||||||| Sbjct: 4786 gcggcggcggtgctggtggcggcg 4763
>gb|AC009407.8| Homo sapiens BAC clone RP11-223I10 from 2, complete sequence Length = 202568 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ggtggggcggcaatgcgggg 271 |||||||||||||||||||| Sbjct: 162912 ggtggggcggcaatgcgggg 162893
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 cgcggcggcgctgctggtggcggc 249 |||||||||||||||| ||||||| Sbjct: 3452706 cgcggcggcgctgctgctggcggc 3452729 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cgacggcgtcggcgcgcgcc 373 |||||||||||||||||||| Sbjct: 2643606 cgacggcgtcggcgcgcgcc 2643625 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gccgcggcggcgctgctggtggcg 247 ||||||||||||||||||| |||| Sbjct: 197290 gccgcggcggcgctgctggcggcg 197313
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggcggcgtggtggggcggca 263 |||||||||||||||||||| Sbjct: 105460 ggcggcgtggtggggcggca 105479
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cggcgctgctggtggcggcg 250 |||||||||||||||||||| Sbjct: 3876494 cggcgctgctggtggcggcg 3876475 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 348 ggaaggcgacggcgtcggcgcgcgccag 375 |||||||| |||||||||||||| |||| Sbjct: 3575833 ggaaggcgtcggcgtcggcgcgcaccag 3575806
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 217 ggccatggccgcggcggcgctgctggtg 244 ||||| |||| ||||||||||||||||| Sbjct: 44114 ggccacggccacggcggcgctgctggtg 44141
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcggaggcgcaggcgccgg 293 |||||||||||||||||||| Sbjct: 98257 ggcggaggcgcaggcgccgg 98276
>gb|AY298951.1| Chlamydomonas reinhardtii long flagella (LF1) gene, complete cds Length = 7227 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ggccgcggcggcgctgctgg 242 |||||||||||||||||||| Sbjct: 3647 ggccgcggcggcgctgctgg 3628
>emb|AL929411.11| Mouse DNA sequence from clone RP23-353O20 on chromosome 2, complete sequence Length = 149594 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tggggttcctggtgaacaag 430 |||||||||||||||||||| Sbjct: 94122 tggggttcctggtgaacaag 94103
>dbj|AK111034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H12, full insert sequence Length = 611 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggcggaggcgcaggcgccgg 293 |||||||||||||||||||| Sbjct: 85 ggcggaggcgcaggcgccgg 104
>dbj|AK109090.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A02, full insert sequence Length = 1233 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 ggccatggccgcggcggcgc 236 |||||||||||||||||||| Sbjct: 887 ggccatggccgcggcggcgc 868
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gcggcgctgctggtggcggc 249 |||||||||||||||||||| Sbjct: 752872 gcggcgctgctggtggcggc 752891
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 437 gcgctgggccggctgggcatcccg 460 ||||||| |||||||||||||||| Sbjct: 704067 gcgctggtccggctgggcatcccg 704090
>dbj|AK064929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O03, full insert sequence Length = 1483 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggcggcgtggtggggcggca 263 |||||||||||||||||||| Sbjct: 180 ggcggcgtggtggggcggca 199
>gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 103 of 118 of the complete sequence Length = 239049 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 26489 ccagtaccagtgccagtgcc 26470
>gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80 of 118 of the complete sequence Length = 233746 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ccagtaccagtgccagtgcc 127 |||||||||||||||||||| Sbjct: 19089 ccagtaccagtgccagtgcc 19070
>gb|AF058792.1|AF058792 Caulobacter crescentus HFA-A (hfaA) gene, complete cds Length = 666 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cggcgctgctggtggcggcg 250 |||||||||||||||||||| Sbjct: 30 cggcgctgctggtggcggcg 11
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ggcgacggcgtcggcgcgcg 371 |||||||||||||||||||| Sbjct: 1477298 ggcgacggcgtcggcgcgcg 1477279
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgacggcggcgcgcccaccg 211 |||||||||||||||||||| Sbjct: 2208776 cgacggcggcgcgcccaccg 2208757
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 tacgggttctgcaaccggaa 351 |||||||||||||||||||| Sbjct: 1874535 tacgggttctgcaaccggaa 1874516
>emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chromosome 11, complete sequence Length = 223794 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aggggaggggagagccagag 154 |||||||||||||||||||| Sbjct: 8386 aggggaggggagagccagag 8367
>emb|AL831790.3| Mouse DNA sequence from clone RP23-334I5 on chromosome 4, complete sequence Length = 206074 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 136 ggggaggggagagccagagcacgcacgc 163 ||||||||||||| ||||||||||||| Sbjct: 108973 ggggaggggagagagagagcacgcacgc 108946 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,947,728 Number of Sequences: 3902068 Number of extensions: 3947728 Number of successful extensions: 111528 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103629 Number of HSP's gapped (non-prelim): 7894 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
