Clone Name | bastl20h09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_483534.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3488 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 416 tcctaggttcctggttgcttgctcaggctccaagtt 451
>ref|XM_483533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2860 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 414 tcctaggttcctggttgcttgctcaggctccaagtt 449
>ref|XM_483532.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3006 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 414 tcctaggttcctggttgcttgctcaggctccaagtt 449
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 26779616 tcctaggttcctggttgcttgctcaggctccaagtt 26779651
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 122958 tcctaggttcctggttgcttgctcaggctccaagtt 122993
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 42406 tcctaggttcctggttgcttgctcaggctccaagtt 42441
>dbj|AK102567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097K24, full insert sequence Length = 3006 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 414 tcctaggttcctggttgcttgctcaggctccaagtt 449
>dbj|AK099654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066A21, full insert sequence Length = 3488 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 416 tcctaggttcctggttgcttgctcaggctccaagtt 451
>dbj|AK067265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D09, full insert sequence Length = 2861 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 425 tcctaggtccctggttgcttgctcaggctccaagtt 460 |||||||| ||||||||||||||||||||||||||| Sbjct: 415 tcctaggttcctggttgcttgctcaggctccaagtt 450
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 417 atggttcgtcctaggtccctggttgcttgctcaggctccaa 457 ||||||| ||| |||| ||| |||||||| ||||||||||| Sbjct: 70938 atggttcatcccaggttccttgttgcttgttcaggctccaa 70978
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 417 atggttcgtcctaggtccctggttgcttgctcaggctccaa 457 ||||||| ||| |||| ||| |||||||| ||||||||||| Sbjct: 19475531 atggttcatcccaggttccttgttgcttgttcaggctccaa 19475571
>dbj|AK100887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128J02, full insert sequence Length = 2838 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 417 atggttcgtcctaggtccctggttgcttgctcaggctccaa 457 ||||||| ||| |||| ||| |||||||| ||||||||||| Sbjct: 231 atggttcatcccaggttccttgttgcttgttcaggctccaa 271
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 ttcggcggaggtggacgtcga 241 ||||||||||||||||||||| Sbjct: 1708598 ttcggcggaggtggacgtcga 1708618
>ref|XM_517624.1| PREDICTED: Pan troglodytes similar to adenylate cyclase 2; ATP pyrophosphate-lyase; type II adenylate cyclase; 3,5-cyclic AMP synthetase; adenylyl cyclase 2; adenylate cyclase II (LOC461715), mRNA Length = 3597 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atccagatgctgccgctgct 53 |||||||||||||||||||| Sbjct: 2001 atccagatgctgccgctgct 1982
>gb|AC007418.9| Drosophila melanogaster clone BACR16P22, complete sequence Length = 179325 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgctgccgctgctactaact 60 |||||||||||||||||||| Sbjct: 16768 tgctgccgctgctactaact 16787
>emb|CR749634.1| Homo sapiens mRNA; cDNA DKFZp686J099 (from clone DKFZp686J099) Length = 9825 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atccagatgctgccgctgct 53 |||||||||||||||||||| Sbjct: 8451 atccagatgctgccgctgct 8432
>gb|AC118563.1| Homo sapiens chromosome 5 clone CTD-2243F8, complete sequence Length = 105027 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atccagatgctgccgctgct 53 |||||||||||||||||||| Sbjct: 56796 atccagatgctgccgctgct 56777
>gb|M31129.1|DROGPAD Drosophila melanogaster G protein alpha subunit gene, partial cds Length = 1889 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgctgccgctgctactaact 60 |||||||||||||||||||| Sbjct: 192 tgctgccgctgctactaact 211
>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone BACR20O22, complete sequence Length = 168567 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgctgccgctgctactaact 60 |||||||||||||||||||| Sbjct: 117508 tgctgccgctgctactaact 117527
>gb|AC010346.6|AC010346 Homo sapiens chromosome 5 clone CITB-H1_2018B2, complete sequence Length = 109626 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atccagatgctgccgctgct 53 |||||||||||||||||||| Sbjct: 12699 atccagatgctgccgctgct 12680
>emb|CT009703.8| Zebrafish DNA sequence from clone DKEYP-32B7 in linkage group 12, complete sequence Length = 129251 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ccagaaaatatcatttctag 98 |||||||||||||||||||| Sbjct: 76235 ccagaaaatatcatttctag 76254
>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete sequence Length = 281782 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgctgccgctgctactaact 60 |||||||||||||||||||| Sbjct: 96412 tgctgccgctgctactaact 96431
>gb|AF082183.1|AF082183 Streptococcus mutans ABC transporter MutF (mutF), membrane spanning protein MutE (mutE), and membrane protein MutG (mutG) genes, complete cds; and fructose bi-phosphate aldolase (fba) gene, partial cds Length = 3398 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 agaaaatatcatttctagcg 100 |||||||||||||||||||| Sbjct: 2378 agaaaatatcatttctagcg 2397 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,106,699 Number of Sequences: 3902068 Number of extensions: 3106699 Number of successful extensions: 47784 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47694 Number of HSP's gapped (non-prelim): 90 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)