ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue 210 7e-52
2dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 2e-09
3dbj|AK063385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 2e-09
4dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 9... 70 2e-09
5gb|AY103537.1| Zea mays PCO098403 mRNA sequence 66 2e-08
6gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 50 0.001
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.001
8dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.001
9dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.001
10gb|BT011034.1| Drosophila melanogaster RE44641 full insert cDNA 48 0.006
11gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 44 0.091
12gb|AC010107.7| Drosophila melanogaster 3L BAC RP98-2B1 (Roswell ... 44 0.091
13ref|NM_079285.2| Drosophila melanogaster -Tubulin at 67C CG8308-... 44 0.091
14gb|AC091220.3| Drosophila melanogaster 3L BAC RP98-7E7 (Roswell ... 44 0.091
15gb|AE003551.3| Drosophila melanogaster chromosome 3L, section 34... 44 0.091
16gb|M14646.1|DROTUBA4 D.melanogaster alpha-tubulin gene (alpha-4)... 44 0.091
17gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 1.4
18ref|XM_567704.1| Cryptococcus neoformans var. neoformans JEC21 5... 40 1.4
19ref|NM_001319.5| Homo sapiens casein kinase 1, gamma 2 (CSNK1G2)... 38 5.6
20gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipie... 38 5.6
21ref|XM_419882.1| PREDICTED: Gallus gallus similar to DEAD (Asp-G... 38 5.6
22gb|AC102135.12| Mus musculus chromosome 18, clone RP23-253J5, co... 38 5.6
23ref|XM_849453.1| PREDICTED: Canis familiaris similar to Transcri... 38 5.6
24ref|XM_803369.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
25ref|XM_804608.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
26ref|XM_804717.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
27ref|XM_809717.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
28ref|XM_811143.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
29ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
30ref|XM_814975.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
31ref|XM_800532.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
32ref|XM_803071.1| Trypanosoma cruzi strain CL Brener dispersed ge... 38 5.6
33gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipie... 38 5.6
34emb|AL662790.21| Mouse DNA sequence from clone RP23-53E2 on chro... 38 5.6
35dbj|AB230832.1| Aspergillus oryzae cDNA, contig sequence: AoEST9019 38 5.6
36gb|AC181983.2| Gallus gallus BAC clone CH261-63A17 from chromoso... 38 5.6
37gb|AC005306.2|AC005306 Homo sapiens chromosome 19, cosmid R27216... 38 5.6
38gb|AY007134.1| Homo sapiens clone CDABP0048 mRNA sequence 38 5.6
39ref|NM_208188.1| Eremothecium gossypii ABL112Wp (ABL112W), mRNA 38 5.6
40gb|BC020972.1| Homo sapiens casein kinase 1, gamma 2, mRNA (cDNA... 38 5.6
41gb|AC109616.9| Mus musculus chromosome 19, clone RP23-449C1, com... 38 5.6
42gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 38 5.6
43gb|AC102553.8| Mus musculus chromosome 19, clone RP23-159D6, com... 38 5.6 
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue
          Length = 2682

 Score =  210 bits (106), Expect = 7e-52
 Identities = 119/122 (97%), Gaps = 1/122 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   accctccccgatccagctaagaagctccaagtcaatgccgaggagagcggcgacgaggtt 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 99  accctccccgatccagctaagaagctccaagtcaatgccgaggagagcagcgacgaggtt 158

                                                                       
Query: 61  ggcgattttcccaagttagaggagaagcttggggccgtg-cccatggcttgtccaccgac 119
           ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 159 ggcgattttcccaaggtagaggagaagcttggggccgtgccccatggcttgtccaccgac 218

             
Query: 120 tc 121
           ||
Sbjct: 219 tc 220
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>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full
           insert sequence
          Length = 2708

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 4   ctccccgatccagctaagaagctccaagtcaatgc 38
           |||||||||||||||||||||||||||||||||||
Sbjct: 138 ctccccgatccagctaagaagctccaagtcaatgc 172
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>dbj|AK063385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G08, full
           insert sequence
          Length = 1577

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 4   ctccccgatccagctaagaagctccaagtcaatgc 38
           |||||||||||||||||||||||||||||||||||
Sbjct: 134 ctccccgatccagctaagaagctccaagtcaatgc 168
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>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds
          Length = 2731

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 4   ctccccgatccagctaagaagctccaagtcaatgc 38
           |||||||||||||||||||||||||||||||||||
Sbjct: 132 ctccccgatccagctaagaagctccaagtcaatgc 166
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>gb|AY103537.1| Zea mays PCO098403 mRNA sequence
          Length = 2806

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 1   accctccccgatccagctaagaagctccaagtcaatgccgaggagagcggcga 53
           ||||||||||| |||||||||||||| || || ||||||||||||||| ||||
Sbjct: 127 accctccccgacccagctaagaagctacaggtgaatgccgaggagagcagcga 179



 Score = 50.1 bits (25), Expect = 0.001
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                                
Query: 70  cccaagttagaggagaagcttggggccgtgcc-catggcttgtccaccgactc 121
           |||||| |||||||||||||||| || || || |||||| |||||||||||||
Sbjct: 196 cccaaggtagaggagaagcttggtgctgtccctcatggcctgtccaccgactc 248
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>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
             sequence
          Length = 143507

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 14    cagctaagaagctccaagtcaatgc 38
             |||||||||||||||||||||||||
Sbjct: 14398 cagctaagaagctccaagtcaatgc 14374
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 14       cagctaagaagctccaagtcaatgc 38
                |||||||||||||||||||||||||
Sbjct: 29933692 cagctaagaagctccaagtcaatgc 29933668
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>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0541C02
          Length = 150660

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 14   cagctaagaagctccaagtcaatgc 38
            |||||||||||||||||||||||||
Sbjct: 9840 cagctaagaagctccaagtcaatgc 9816
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 14     cagctaagaagctccaagtcaatgc 38
              |||||||||||||||||||||||||
Sbjct: 129205 cagctaagaagctccaagtcaatgc 129181
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>gb|BT011034.1| Drosophila melanogaster RE44641 full insert cDNA
          Length = 1620

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 31   gtcaatgccgaggagagcggcgacgagg 58
            ||||||||||||||| ||||||||||||
Sbjct: 1478 gtcaatgccgaggagggcggcgacgagg 1505
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 65     attttcccaagttagaggagaagctt 90
              |||||||||||||||||| |||||||
Sbjct: 185288 attttcccaagttagaggggaagctt 185313
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>gb|AC010107.7| Drosophila melanogaster 3L BAC RP98-2B1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181063

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 33    caatgccgaggagagcggcgacgagg 58
             ||||||||||||| ||||||||||||
Sbjct: 88421 caatgccgaggagggcggcgacgagg 88396
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>ref|NM_079285.2| Drosophila melanogaster -Tubulin at 67C CG8308-RA (alphaTub67C), mRNA
          Length = 1608

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 33   caatgccgaggagagcggcgacgagg 58
            ||||||||||||| ||||||||||||
Sbjct: 1482 caatgccgaggagggcggcgacgagg 1507
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>gb|AC091220.3| Drosophila melanogaster 3L BAC RP98-7E7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179838

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 33    caatgccgaggagagcggcgacgagg 58
             ||||||||||||| ||||||||||||
Sbjct: 21691 caatgccgaggagggcggcgacgagg 21716
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>gb|AE003551.3| Drosophila melanogaster chromosome 3L, section 34 of 83 of the complete
              sequence
          Length = 285860

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 33     caatgccgaggagagcggcgacgagg 58
              ||||||||||||| ||||||||||||
Sbjct: 206273 caatgccgaggagggcggcgacgagg 206298
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>gb|M14646.1|DROTUBA4 D.melanogaster alpha-tubulin gene (alpha-4), complete cds
          Length = 2332

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 33   caatgccgaggagagcggcgacgagg 58
            ||||||||||||| ||||||||||||
Sbjct: 2172 caatgccgaggagggcggcgacgagg 2197
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     agcggcgacgaggttggcga 65
              ||||||||||||||||||||
Sbjct: 675009 agcggcgacgaggttggcga 674990
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>ref|XM_567704.1| Cryptococcus neoformans var. neoformans JEC21
            5-methyltetrahydropteroyltriglutamate-homocysteine
            S-methyltransferase (CNK02310) partial mRNA
          Length = 2623

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   agcggcgacgaggttggcga 65
            ||||||||||||||||||||
Sbjct: 2298 agcggcgacgaggttggcga 2279
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>ref|NM_001319.5| Homo sapiens casein kinase 1, gamma 2 (CSNK1G2), mRNA
          Length = 2446

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 81   ggagaagcttggggccgtgccca 103
            |||| ||||||||||||||||||
Sbjct: 2281 ggagcagcttggggccgtgccca 2303
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>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940130D9, complete sequence
          Length = 117683

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    atgccgaggagagcggcga 53
             |||||||||||||||||||
Sbjct: 49200 atgccgaggagagcggcga 49218
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>ref|XM_419882.1| PREDICTED: Gallus gallus similar to DEAD (Asp-Glu-Ala-Asp) box
          polypeptide 43; DEAD-box protein 43 (LOC421865), mRNA
          Length = 752

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 40 gaggagagcggcgacgagg 58
          |||||||||||||||||||
Sbjct: 49 gaggagagcggcgacgagg 67
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>gb|AC102135.12| Mus musculus chromosome 18, clone RP23-253J5, complete sequence
          Length = 204286

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    gattttcccaagttagagg 82
             |||||||||||||||||||
Sbjct: 23363 gattttcccaagttagagg 23345
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>ref|XM_849453.1| PREDICTED: Canis familiaris similar to Transcription factor COE3
            (Early B-cell factor 3) (EBF-3) (Olf-1/EBF-like 2) (OE-2)
            (O/E-2) (LOC611743), mRNA
          Length = 2779

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 79   gaggagaagcttggggccg 97
            |||||||||||||||||||
Sbjct: 2182 gaggagaagcttggggccg 2164
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>ref|XM_803369.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
             (DGF-1) (Tc00.1047053507779.30) partial mRNA
          Length = 10383

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    cgaggagagcggcgacgag 57
             |||||||||||||||||||
Sbjct: 10179 cgaggagagcggcgacgag 10197
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>ref|XM_804608.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
             (DGF-1) (Tc00.1047053511765.20) partial mRNA
          Length = 10284

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 35    atgccgaggagagcggcgacgag 57
             ||||||||||||||| |||||||
Sbjct: 10178 atgccgaggagagcgacgacgag 10200
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>ref|XM_804717.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
             (DGF-1) (Tc00.1047053507245.40) partial mRNA
          Length = 10383

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    cgaggagagcggcgacgag 57
             |||||||||||||||||||
Sbjct: 10179 cgaggagagcggcgacgag 10197
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>ref|XM_809717.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
             (DGF-1) (Tc00.1047053511767.20) partial mRNA
          Length = 10395

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 35    atgccgaggagagcggcgacgag 57
             ||||||||||||||| |||||||
Sbjct: 10190 atgccgaggagagcgacgacgag 10212
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>ref|XM_811143.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
             (DGF-1) (Tc00.1047053511185.130) partial mRNA
          Length = 10446

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    cgaggagagcggcgacgag 57
             |||||||||||||||||||
Sbjct: 10248 cgaggagagcggcgacgag 10266
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>ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
             (DGF-1) (Tc00.1047053509287.140) partial mRNA
          Length = 10401

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    cgaggagagcggcgacgag 57
             |||||||||||||||||||
Sbjct: 10200 cgaggagagcggcgacgag 10218
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>ref|XM_814975.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
             (DGF-1) (Tc00.1047053509287.240) partial mRNA
          Length = 10392

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    cgaggagagcggcgacgag 57
             |||||||||||||||||||
Sbjct: 10191 cgaggagagcggcgacgag 10209
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>ref|XM_800532.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506571.10) partial mRNA
          Length = 4720

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   cgaggagagcggcgacgag 57
            |||||||||||||||||||
Sbjct: 4546 cgaggagagcggcgacgag 4564
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>ref|XM_803071.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053504533.10) partial mRNA
          Length = 3170

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   cgaggagagcggcgacgag 57
            |||||||||||||||||||
Sbjct: 2969 cgaggagagcggcgacgag 2987
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>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940141D9, complete sequence
          Length = 117679

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    atgccgaggagagcggcga 53
             |||||||||||||||||||
Sbjct: 68482 atgccgaggagagcggcga 68464
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>emb|AL662790.21| Mouse DNA sequence from clone RP23-53E2 on chromosome 11 Contains the
             5' end of a novel pseudogene (similar to hypothetical
             protein TR:Q8C517), 3 novel pseudogenes (similar to
             hypothetical protein TR:Q8C517) and the 5' end of the
             Col1a1 gene for pro-collagen type I alpha 1, complete
             sequence
          Length = 133405

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     ctccccgatccagctaaga 22
             |||||||||||||||||||
Sbjct: 14573 ctccccgatccagctaaga 14591
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>dbj|AB230832.1| Aspergillus oryzae cDNA, contig sequence: AoEST9019
          Length = 850

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 31  gtcaatgccgaggagagcg 49
           |||||||||||||||||||
Sbjct: 301 gtcaatgccgaggagagcg 319
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>gb|AC181983.2| Gallus gallus BAC clone CH261-63A17 from chromosome ul, complete
             sequence
          Length = 161905

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    gaggagagcggcgacgagg 58
             |||||||||||||||||||
Sbjct: 83094 gaggagagcggcgacgagg 83112
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>gb|AC005306.2|AC005306 Homo sapiens chromosome 19, cosmid R27216 (LLNLR-232D4) and 3'
             overlapping PCR product, complete sequence
          Length = 42569

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 81    ggagaagcttggggccgtgccca 103
             |||| ||||||||||||||||||
Sbjct: 31260 ggagcagcttggggccgtgccca 31282
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>gb|AY007134.1| Homo sapiens clone CDABP0048 mRNA sequence
          Length = 1615

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 81   ggagaagcttggggccgtgccca 103
            |||| ||||||||||||||||||
Sbjct: 1454 ggagcagcttggggccgtgccca 1476
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>ref|NM_208188.1| Eremothecium gossypii ABL112Wp (ABL112W), mRNA
          Length = 2916

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 52   gacgaggttggcgattttc 70
            |||||||||||||||||||
Sbjct: 2019 gacgaggttggcgattttc 2001
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>gb|BC020972.1| Homo sapiens casein kinase 1, gamma 2, mRNA (cDNA clone MGC:9354
            IMAGE:3851613), complete cds
          Length = 2446

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 81   ggagaagcttggggccgtgccca 103
            |||| ||||||||||||||||||
Sbjct: 2281 ggagcagcttggggccgtgccca 2303
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>gb|AC109616.9| Mus musculus chromosome 19, clone RP23-449C1, complete sequence
          Length = 167801

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 72    caagttagaggagaagcttgggg 94
             |||||||||||||||| ||||||
Sbjct: 62473 caagttagaggagaagattgggg 62495
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>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     gacgaggttggcgattttc 70
              |||||||||||||||||||
Sbjct: 190895 gacgaggttggcgattttc 190877
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>gb|AC102553.8| Mus musculus chromosome 19, clone RP23-159D6, complete sequence
          Length = 181534

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 72   caagttagaggagaagcttgggg 94
            |||||||||||||||| ||||||
Sbjct: 8125 caagttagaggagaagattgggg 8103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 719,401
Number of Sequences: 3902068
Number of extensions: 719401
Number of successful extensions: 50143
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50029
Number of HSP's gapped (non-prelim): 112
length of query: 121
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 100
effective length of database: 17,151,101,840
effective search space: 1715110184000
effective search space used: 1715110184000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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