>XKR6_RAT (Q5GH57) XK-related protein 6|
          Length = 638

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = +1

Query: 208 LSGDIIRNSSAAAKGGRQRRRPRDAAGSNPPPP 306
           L G   R S+AAA GG Q  +P  AAG +PP P
Sbjct: 75  LLGKKPRRSAAAADGGDQPLQPPGAAGRHPPTP 107

>EPS8_HUMAN (Q12929) Epidermal growth factor receptor kinase substrate 8|
          Length = 822

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
 Frame = +1

Query: 202 AQLSGDIIRNSSAAAKGGRQRRRP------RDAAGSNPPPPRRAA 318
           A L  + I ++ + +KGG+Q+RRP       +A  S PPPPR  A
Sbjct: 173 ANLISEDIESAISDSKGGKQKRRPDALRMISNADPSIPPPPRAPA 217

>EPS8_PONPY (Q5R4H4) Epidermal growth factor receptor kinase substrate 8|
          Length = 822

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
 Frame = +1

Query: 202 AQLSGDIIRNSSAAAKGGRQRRRP------RDAAGSNPPPPRRAA 318
           A L  + I ++ + +KGG+Q+RRP       +A    PPPPR  A
Sbjct: 173 ANLISEDIESAISDSKGGKQKRRPDALRMISNADPGIPPPPRAPA 217

>EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase substrate 8|
          Length = 821

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
 Frame = +1

Query: 202 AQLSGDIIRNSSAAAKGGRQRRRPR------DAAGSNPPPPRRAA 318
           A L  + I ++ + +KGG+Q+RRP        A    PPPPR  A
Sbjct: 173 ANLISEDIESAISDSKGGKQKRRPEALRMIAKADPGIPPPPRAPA 217

>IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2|
          Length = 917

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = +1

Query: 235 SAAAKGGRQRRRP---RDAAGSNPPPPRR 312
           S AA GG   RRP   R   G+ P PPRR
Sbjct: 245 SGAAAGGDDERRPAPRRSGPGAPPAPPRR 273

>NOLA1_DROME (Q7KVQ0) H/ACA ribonucleoprotein complex subunit 1-like protein|
           (GCR 101 snRNP)
          Length = 237

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 74  GLGGFNRDGNQSGGGGRKEARW 9
           G GGFNR     GGGG    RW
Sbjct: 216 GGGGFNRGRGGGGGGGGGRGRW 237

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 214 GDIIRNSSAAAKGGRQRRRPRDAAGSNPPPP 306
           GD +  S  +    + + +P +AA +NPPPP
Sbjct: 18  GDGLETSQMSTTQAQAQPQPANAASTNPPPP 48

>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 214 GDIIRNSSAAAKGGRQRRRPRDAAGSNPPPP 306
           GD +  S  +    + + +P +AA +NPPPP
Sbjct: 18  GDGLETSQMSTTQAQAQPQPANAASTNPPPP 48

>DPOL_HCMVA (P08546) DNA polymerase (EC 2.7.7.7)|
          Length = 1242

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 208 LSGDIIRNSSAAAKGGRQRRRPRDAAGSNPPPPRR 312
           LSG +     A A G RQR +P  A GS   PP++
Sbjct: 7   LSGGV--TGGAVAGGRRQRSQPGSAQGSGKRPPQK 39

>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)|
           (DRF3)
          Length = 1110

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 232 SSAAAKGGRQRRRPRDAAGSNPPPP 306
           SSA+ +G R+ + PR     +PPPP
Sbjct: 23  SSASLRGCRESKMPRRKGPQHPPPP 47

>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 226 RNSSAAAKGGRQRRRPRDAAGSNPPPPR 309
           R S   ++GGR RRR R ++ S+P   R
Sbjct: 363 RGSRGGSRGGRLRRRGRSSSSSSPAHKR 390

>VE2_HPV05 (P06921) Regulatory protein E2|
          Length = 514

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 226 RNSSAAAKGGRQRRRPRDAAGSNPPPPR 309
           R S   ++GGR RRR R ++ S+P   R
Sbjct: 363 RGSRGGSRGGRGRRRGRSSSSSSPAHKR 390

>EGG2_SCHJA (P19469) Eggshell protein 2A precursor|
          Length = 207

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 92  GLARAAGLGGFNRDGNQSGGGGR 24
           G  +  G GG N +GN  GGGG+
Sbjct: 165 GGGKGGGKGGGNGEGNGKGGGGK 187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.126    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,454,891
Number of Sequences: 219361
Number of extensions: 203785
Number of successful extensions: 1618
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)