>ref|NM_187524.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1728

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 387  ccccctccggcgacgacgacggccccggc 415
            |||||||||||| |||||||||| |||||
Sbjct: 1618 ccccctccggcggcgacgacggcaccggc 1590

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 387     ccccctccggcgacgacgacggccccggc 415
               |||||||||||| |||||||||| |||||
Sbjct: 8625387 ccccctccggcggcgacgacggcaccggc 8625359

>ref|XM_384750.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04574.1)
            partial mRNA
          Length = 2403

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  cgacagcggcgcctccgcctc 270
            |||||||||||||||||||||
Sbjct: 2016 cgacagcggcgcctccgcctc 2036

>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 395    ggcgacgacgacggccccggcggtc 419
              ||||||||||||| |||||||||||
Sbjct: 236154 ggcgacgacgacgcccccggcggtc 236178

>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
              complete sequence
          Length = 137327

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 387    ccccctccggcgacgacgacggccccggc 415
              |||||||||||| |||||||||| |||||
Sbjct: 106359 ccccctccggcggcgacgacggcaccggc 106331

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 387     ccccctccggcgacgacgacggccccggc 415
               |||||||||||| |||||||||| |||||
Sbjct: 8623222 ccccctccggcggcgacgacggcaccggc 8623194

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 391     ctccggcgacgacgacggccccggc 415
               |||| ||||||||||||||||||||
Sbjct: 5946129 ctccagcgacgacgacggccccggc 5946153

>gb|DQ230829.1| Chlamydomonas reinhardtii target of rapamycin kinase (TOR) mRNA,
            complete cds
          Length = 7572

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 393  ccggcgacgacgacggccccggcgg 417
            |||||||||||| ||||||||||||
Sbjct: 2606 ccggcgacgacggcggccccggcgg 2630

>ref|XM_479972.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 513

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 393 ccggcgacgacgacggccccggcg 416
           ||||||||||||||||| ||||||
Sbjct: 89  ccggcgacgacgacggcgccggcg 66

>gb|AC116600.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0036D19,
              complete sequence
          Length = 126686

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 394    cggcgacgacgacggccccggcgg 417
              |||||||||||||||| |||||||
Sbjct: 100807 cggcgacgacgacggctccggcgg 100830

>gb|DQ017380.1| Trichoplusia ni single nucleopolyhedrovirus, complete genome
          Length = 134394

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   ctccggcgacgacgacggcc 410
             ||||||||||||||||||||
Sbjct: 21254 ctccggcgacgacgacggcc 21273

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 391     ctccggcgacgacgacggccccgg 414
               ||||||||||| ||||||||||||
Sbjct: 2247365 ctccggcgacggcgacggccccgg 2247342

>emb|AM048825.1| Oryza sativa mRNA for sialyltransferase-like protein (stv1 gene)
          Length = 1535

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 230 ctcctccgccgcctagcggccgac 253
           |||||||||||||| |||||||||
Sbjct: 284 ctcctccgccgcctcgcggccgac 307

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    cggcgacggccgacggcccg 340
              ||||||||||||||||||||
Sbjct: 145764 cggcgacggccgacggcccg 145745

>emb|AL359693.11| Human DNA sequence from clone RP11-244G12 on chromosome 6, complete
             sequence
          Length = 149696

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   gggagtaatgaattgcagag 122
             ||||||||||||||||||||
Sbjct: 61195 gggagtaatgaattgcagag 61176

>gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0050E08, complete sequence
          Length = 180499

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 394   cggcgacgacgacggccccggcgg 417
             |||||||||||||||| |||||||
Sbjct: 34121 cggcgacgacgacggctccggcgg 34144

>gb|AE005795.1| Caulobacter crescentus CB15 section 121 of 359 of the complete genome
          Length = 12871

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   cgacgacgacggccccggcg 416
             ||||||||||||||||||||
Sbjct: 10818 cgacgacgacggccccggcg 10799

>emb|CR353981.1| Gallus gallus finished cDNA, clone ChEST9i8
          Length = 892

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 cagcggcgcctccgcctccc 272
           ||||||||||||||||||||
Sbjct: 52  cagcggcgcctccgcctccc 33

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 230     ctcctccgccgcctagcggccgac 253
               |||||||||||||| |||||||||
Sbjct: 2545649 ctcctccgccgcctcgcggccgac 2545672

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 394     cggcgacgacgacggccccggcgg 417
               |||||||||||||||| |||||||
Sbjct: 3752325 cggcgacgacgacggctccggcgg 3752348

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 416      ggtcgtcttcctcctccgtc 435
                ||||||||||||||||||||
Sbjct: 21056455 ggtcgtcttcctcctccgtc 21056436

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 393     ccggcgacgacgacggccccggcg 416
               ||||||||||||||||| ||||||
Sbjct: 2011979 ccggcgacgacgacggcgccggcg 2011956

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 255      gcggcgcctccgcctccctc 274
                ||||||||||||||||||||
Sbjct: 27019167 gcggcgcctccgcctccctc 27019148

>gb|AF304659.1|AF304659 Brenda gracilicauda 28S ribosomal RNA gene, partial sequence
          Length = 1836

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 ggcgacggccgacggcccgg 341
           ||||||||||||||||||||
Sbjct: 295 ggcgacggccgacggcccgg 314

>gb|AF304658.1|AF304658 Tiaja friscana 28S ribosomal RNA gene, partial sequence
          Length = 3150

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 ggcgacggccgacggcccgg 341
           ||||||||||||||||||||
Sbjct: 295 ggcgacggccgacggcccgg 314

>gb|AF304645.1|AF304645 Aceratagallia uhleri 28S ribosomal RNA gene, partial sequence
          Length = 2413

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 ggcgacggccgacggcccgg 341
           ||||||||||||||||||||
Sbjct: 295 ggcgacggccgacggcccgg 314

>gb|AE004743.1| Pseudomonas aeruginosa PAO1, section 304 of 529 of the complete
            genome
          Length = 10146

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  cgacgacgacggccccggcg 416
            ||||||||||||||||||||
Sbjct: 2078 cgacgacgacggccccggcg 2059

>dbj|AP004364.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0445H04
          Length = 202821

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    gcggcgcctccgcctccctc 274
              ||||||||||||||||||||
Sbjct: 200812 gcggcgcctccgcctccctc 200793

>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0671D01
          Length = 163006

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   gcggcgcctccgcctccctc 274
             ||||||||||||||||||||
Sbjct: 77998 gcggcgcctccgcctccctc 77979

>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1274F11
          Length = 171257

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    ggtcgtcttcctcctccgtc 435
              ||||||||||||||||||||
Sbjct: 148544 ggtcgtcttcctcctccgtc 148525

>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1613_G04
          Length = 135357

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 393  ccggcgacgacgacggccccggcg 416
            ||||||||||||||||| ||||||
Sbjct: 5509 ccggcgacgacgacggcgccggcg 5486

>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 393    ccggcgacgacgacggccccggcg 416
              ||||||||||||||||| ||||||
Sbjct: 137177 ccggcgacgacgacggcgccggcg 137154

>dbj|AK105865.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A06, full
           insert sequence
          Length = 1475

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 230 ctcctccgccgcctagcggccgac 253
           |||||||||||||| |||||||||
Sbjct: 176 ctcctccgccgcctcgcggccgac 199

>dbj|AK058389.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-A04, full
           insert sequence
          Length = 1475

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 230 ctcctccgccgcctagcggccgac 253
           |||||||||||||| |||||||||
Sbjct: 176 ctcctccgccgcctcgcggccgac 199

>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0478E02
          Length = 140715

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   ggtcgtcttcctcctccgtc 435
             ||||||||||||||||||||
Sbjct: 77755 ggtcgtcttcctcctccgtc 77736

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 394     cggcgacgacgacggccccggcgg 417
               |||||||||||||||| |||||||
Sbjct: 3752246 cggcgacgacgacggctccggcgg 3752269

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 230     ctcctccgccgcctagcggccgac 253
               |||||||||||||| |||||||||
Sbjct: 2545593 ctcctccgccgcctcgcggccgac 2545616

>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 136490

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 230    ctcctccgccgcctagcggccgac 253
              |||||||||||||| |||||||||
Sbjct: 122360 ctcctccgccgcctcgcggccgac 122337


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,976,867
Number of Sequences: 3902068
Number of extensions: 2976867
Number of successful extensions: 62864
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61911
Number of HSP's gapped (non-prelim): 953
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)