Clone Information

BLAST Search Result

Clone Name	bastl20g10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)	34	0.19
2	WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protei...	27	0.31
3	WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protei...	27	0.39
4	GYS1_MACMU (Q8MJ26) Glycogen [starch] synthase, muscle (EC 2.4.1...	32	0.56
5	SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (P...	32	0.56
6	NDF1_XENLA (Q91616) Neurogenic differentiation factor 1 (NeuroD1)	32	0.73
7	AN32A_HUMAN (P39687) Acidic leucine-rich nuclear phosphoprotein ...	32	0.73
8	OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)	32	0.73
9	NDF1_HUMAN (Q13562) Neurogenic differentiation factor 1 (NeuroD1...	32	0.73
10	GYS1_MOUSE (Q9Z1E4) Glycogen [starch] synthase, muscle (EC 2.4.1...	32	0.95
11	GYS3_MOUSE (P54859) Glycogen [starch] synthase, brain (EC 2.4.1.11)	32	0.95
12	GYS1_HUMAN (P13807) Glycogen [starch] synthase, muscle (EC 2.4.1...	32	0.95
13	NDF1_MESAU (Q60430) Neurogenic differentiation factor 1 (NeuroD1...	32	0.95
14	FKBP4_SPOFR (Q26486) 46 kDa FK506-binding nuclear protein (EC 5....	31	1.2
15	FUBP1_HUMAN (Q96AE4) Far upstream element-binding protein 1 (FUS...	31	1.2
16	FUBP1_MOUSE (Q91WJ8) Far upstream element-binding protein 1 (FUS...	31	1.2
17	SPT51_ARATH (Q9STN3) Putative transcription elongation factor SP...	31	1.6
18	NOG2_CRYNV (Q8J109) Nucleolar GTP-binding protein 2	31	1.6
19	NDF1_MOUSE (Q60867) Neurogenic differentiation factor 1 (NeuroD1)	31	1.6
20	EVX1_HUMAN (P49640) Homeobox even-skipped homolog protein 1 (EVX-1)	30	2.1
21	PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC...	30	2.1
22	NPM2_HUMAN (Q86SE8) Nucleoplasmin-2	30	2.1
23	CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity fa...	30	2.1
24	CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity fa...	30	2.1
25	CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity fa...	30	2.1
26	NDF1_RAT (Q64289) Neurogenic differentiation factor 1 (NeuroD1) ...	30	2.1
27	NDF1_CHICK (P79765) Neurogenic differentiation factor 1 (NeuroD1...	30	2.1
28	DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)	30	2.1
29	HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated...	30	2.1
30	PTMA_PONPY (Q5R790) Prothymosin alpha [Contains: Thymosin alpha]	30	2.8
31	PTMA_BOVIN (P01252) Prothymosin alpha [Contains: Thymosin alpha-1]	30	2.8
32	HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)	30	2.8
33	PTMA_HUMAN (P06454) Prothymosin alpha [Contains: Thymosin alpha-1]	30	2.8
34	Y2082_MYCTU (Q10690) Hypothetical protein Rv2082	30	2.8
35	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	30	2.8
36	WDR43_HUMAN (Q15061) WD-repeat protein 43	30	2.8
37	NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neur...	30	2.8
38	PTMA_MOUSE (P26350) Prothymosin alpha [Contains: Thymosin alpha]	30	3.6
39	NUCL_RAT (P13383) Nucleolin (Protein C23)	30	3.6
40	NUCL_MACFA (Q4R4J7) Nucleolin	30	3.6
41	PTMA_XENLA (Q5U274) Prothymosin alpha	30	3.6
42	PTMA_RAT (P06302) Prothymosin alpha [Contains: Thymosin alpha]	30	3.6
43	NOC2L_CAEEL (O17580) Nucleolar complex protein 2 homolog (NOC2 p...	30	3.6
44	VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)	30	3.6
45	GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)	30	3.6
46	YKA4_CAEEL (P34256) Hypothetical protein B0303.4	30	3.6
47	MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domai...	30	3.6
48	COAA1_HUMAN (Q03692) Collagen alpha-1(X) chain precursor	29	4.7
49	CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor	29	4.7
50	CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor	29	4.7
51	RL32_HALMA (P12736) 50S ribosomal protein L32e (Hl5)	29	4.7
52	RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (R...	29	4.7
53	RGP1_MOUSE (P46061) Ran GTPase-activating protein 1	29	4.7
54	AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32...	29	4.7
55	AN32A_MOUSE (O35381) Acidic leucine-rich nuclear phosphoprotein ...	29	4.7
56	SPDYC_HUMAN (Q5MJ68) Speedy protein C (Rapid inducer of G2/M pro...	29	4.7
57	HEM1_STRAW (Q82E77) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)	29	6.2
58	SWR1_SCHPO (O13682) Helicase swr1 (EC 3.6.1.-)	29	6.2
59	YBX2B_XENLA (P45441) Y-box-binding protein 2-B (Cytoplasmic RNA-...	29	6.2
60	YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific...	29	6.2
61	CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain	29	6.2
62	EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysi...	29	6.2
63	SWR1_GIBZE (Q4IAK7) Helicase SWR1 (EC 3.6.1.-)	29	6.2
64	EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysi...	29	6.2
65	DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)	29	6.2
66	NOP12_YARLI (Q6C2Q7) Nucleolar protein 12	29	6.2
67	VGLD_PRVRI (P07645) Protein gp50	29	6.2
68	YCF1_PINTH (P41647) Hypothetical 205.3 kDa protein ycf1 (ORF 1756)	29	6.2
69	BFR2_ASPFU (Q4WMI1) Protein bfr2	29	6.2
70	MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein)	28	8.1
71	NUCL_MOUSE (P09405) Nucleolin (Protein C23)	28	8.1
72	CRX_CANFA (Q8SQ03) Cone-rod homeobox protein	28	8.1
73	AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein ...	28	8.1
74	RGP1_HUMAN (P46060) Ran GTPase-activating protein 1	28	8.1
75	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	28	8.1
76	GARP_PLAFF (P13816) Glutamic acid-rich protein precursor	28	8.1
77	SP6D_BACSU (P37963) Stage VI sporulation protein D	28	8.1
78	BFR2_NEUCR (Q7S6P8) Protein bfr-2	28	8.1
79	COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor	28	8.1
80	BFR2_CRYNE (Q5KBS9) Protein BFR2	28	8.1
81	CCD96_MOUSE (Q9CR92) Coiled-coil domain-containing protein 96	28	8.1

>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1772

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQSCGAS 446
           ++E+EE+  ED    +++E  +E  +    RRG++R AP  ++ +S  AS
Sbjct: 297 EEEEEEEQEEDEEQEQQEEEEEEQEEEVTSRRGSRRSAPTKAKGKSKTAS 346

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>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 26.6 bits (57), Expect(2) = 0.31
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 71  RPFPPPTKTPAGCGPARP 124
           +P PPP++TPAG  P  P
Sbjct: 358 KPPPPPSRTPAGPPPPPP 375



 Score = 25.4 bits (54), Expect(2) = 0.31
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 8   SLVSNRNGPPRTRVPRGRYSLRPFPPP 88
           SL+SNR  PP  R P  R +  P PPP
Sbjct: 305 SLLSNR-PPPPAREPPSRGAAPPPPPP 330

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>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 26.6 bits (57), Expect(2) = 0.39
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 71  RPFPPPTKTPAGCGPARP 124
           +P PPP++TPAG  P  P
Sbjct: 358 KPPPPPSRTPAGPPPPPP 375



 Score = 25.0 bits (53), Expect(2) = 0.39
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 8   SLVSNRNGPPRTRVPRGRYSLRPFPPP 88
           SL+SNR  PP  R P  R +  P PPP
Sbjct: 305 SLLSNR-PPPPARDPPSRGAAPPPPPP 330

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>GYS1_MACMU (Q8MJ26) Glycogen [starch] synthase, muscle (EC 2.4.1.11)|
          Length = 737

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQSCGAS 446
           + EDEED   + PL E+ E  DED +   +RR    +AP   R  SC +S
Sbjct: 656 QSEDEED-PRNGPLEEDSERYDEDEEAAKDRRNI--RAPEWPRRASCTSS 702

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>SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (Protein|
           enhancer of yellow 3)
          Length = 2006

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
 Frame = +2

Query: 74  PFPPPTKTPAGCGPAR------PGQIAPDGIGVVDNKSG 172
           P PPP  TPAG G  R        Q +PDG G V  K G
Sbjct: 864 PQPPPVATPAGTGKKRGRPKRIQNQSSPDGGGAVTPKPG 902

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>NDF1_XENLA (Q91616) Neurogenic differentiation factor 1 (NeuroD1)|
          Length = 352

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQ 431
           ++E+E++G E+    E+ E  DED D + +RRG K+K    +R +
Sbjct: 57  ENEEEDEGDEEE---EDDEDDDEDDDQKPKRRGPKKKKMTKARVE 98

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>AN32A_HUMAN (P39687) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Potent heat-stable protein phosphatase 2A
           inhibitor I1PP2A) (Acidic nuclear phosphoprotein pp32)
           (Cerebellar leucine-rich acidic nuclear protein)
           (HLA-DR-associated prote
          Length = 249

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEME 386
           +DEDEE+  EDA ++E++E  DE+ + E E
Sbjct: 172 EDEDEEEYDEDAQVVEDEEDEDEEEEGEEE 201

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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +2

Query: 26  NGPPRTRVPRGRYSLRPFPPPTKTPAGCGPA 118
           N PPR + P G Y+  P PPPT + AG G A
Sbjct: 661 NYPPRPQYPPGAYATGPPPPPT-SQAGAGGA 690

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>NDF1_HUMAN (Q13562) Neurogenic differentiation factor 1 (NeuroD1) (NeuroD)|
          Length = 356

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +3

Query: 306 DEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQ 431
           +EED  ED  L EE+E  +ED D + +RRG K+K    +R +
Sbjct: 58  EEEDEDED--LEEEEEEEEEDDDQKPKRRGPKKKKMTKARLE 97

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>GYS1_MOUSE (Q9Z1E4) Glycogen [starch] synthase, muscle (EC 2.4.1.11)|
          Length = 738

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQSCGAS 446
           + EDEE+   D PL E+ E  DE+ +   +RR    +AP   R  SC +S
Sbjct: 656 QSEDEEE-PRDGPLGEDSERYDEEEEAAKDRRNI--RAPEWPRRASCSSS 702

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>GYS3_MOUSE (P54859) Glycogen [starch] synthase, brain (EC 2.4.1.11)|
          Length = 737

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQSCGAS 446
           + EDEE+   D PL E+ E  DE+ +   +RR    +AP   R  SC +S
Sbjct: 655 QSEDEEE-PRDGPLGEDSERYDEEEEAAKDRRNI--RAPEWPRRASCSSS 701

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>GYS1_HUMAN (P13807) Glycogen [starch] synthase, muscle (EC 2.4.1.11)|
          Length = 737

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQSCGAS 446
           + EDEED   + PL E+ E  DED +   +RR    +AP   R  SC +S
Sbjct: 656 QSEDEED-PRNGPLEEDGERYDEDEEAAKDRRNI--RAPEWPRRASCTSS 702

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>NDF1_MESAU (Q60430) Neurogenic differentiation factor 1 (NeuroD1) (Beta-cell|
           E-box trans-activator 2) (BETA2)
          Length = 355

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +3

Query: 306 DEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQ 431
           DEED  ED   LEE++  +E+ D + +RRG K+K    +R +
Sbjct: 58  DEEDEDED---LEEEDEEEEEDDQKPKRRGPKKKKMTKARLE 96

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>FKBP4_SPOFR (Q26486) 46 kDa FK506-binding nuclear protein (EC 5.2.1.8)|
           (Peptidyl-prolyl cis-trans isomerase) (PPIase)
           (Rotamase)
          Length = 412

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQSCGAS 446
           D DEED  ED    E++E  DED + E E    K+K P + +  +   S
Sbjct: 191 DSDEEDDDEDE---EDEEDDDEDDEEEEEAPKKKKKQPAAEQDSTLDTS 236

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>FUBP1_HUMAN (Q96AE4) Far upstream element-binding protein 1 (FUSE-binding|
           protein 1) (FBP) (DNA helicase V) (HDH V)
          Length = 643

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIG 151
           GPP    P G Y+  P+ P    PA  GP  P   AP G G
Sbjct: 472 GPPGPGTPMGPYNPAPYNPGPPGPAPHGP--PAPYAPQGWG 510

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>FUBP1_MOUSE (Q91WJ8) Far upstream element-binding protein 1 (FUSE-binding|
           protein 1) (FBP)
          Length = 651

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIG 151
           GPP    P G Y+  P+ P    PA  GP  P   AP G G
Sbjct: 469 GPPGPGTPMGPYNPAPYNPGPPGPAPHGP--PAPYAPQGWG 507

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>SPT51_ARATH (Q9STN3) Putative transcription elongation factor SPT5 homolog 1|
          Length = 1054

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = +3

Query: 297 KDEDEE-DGSEDAPLLEEKEGADEDWDVEMER--RGTKRKAPRSS 422
           +DED+E DG  +A  LEE+E  DE+ + E  R   G++RK  RS+
Sbjct: 5   RDEDDELDGDYEALDLEEEEEEDEEEEEERGRGGGGSRRKRGRSN 49

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>NOG2_CRYNV (Q8J109) Nucleolar GTP-binding protein 2|
          Length = 720

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +3

Query: 276 VGWQYVFKDE----DEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKA 410
           + W  VF +E    D  DG E     EE+EG ++D DV   ++  KRKA
Sbjct: 608 LAWDDVFPEEAAGVDAADGEEVEEDDEEEEGDEDDEDVPSAKQLGKRKA 656

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>NDF1_MOUSE (Q60867) Neurogenic differentiation factor 1 (NeuroD1)|
          Length = 357

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 312 EDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQ 431
           E+  ED  L EE+E  +E+ D + +RRG K+K    +R +
Sbjct: 58  EEEEEDEDLEEEEEEEEEEEDQKPKRRGPKKKKMTKARLE 97

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>EVX1_HUMAN (P49640) Homeobox even-skipped homolog protein 1 (EVX-1)|
          Length = 407

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +2

Query: 32  PPRTRVPRGRYSLRPFPPPTKTPAGCGP 115
           PP   VPRG  S R  PP T+   G GP
Sbjct: 38  PPEKMVPRGCLSPRAVPPATRERGGGGP 65

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>PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC 3.1.3.16)|
           (PP2C)
          Length = 491

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRK---APRSSRXQSCGASP 449
           +DEDEE+  E     E+KE  D   +V +E    K +   +P+    + C  SP
Sbjct: 179 EDEDEEEAEEQDDTEEKKENEDASAEVVIENAEDKEEEEGSPKKKGQKRCQKSP 232

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>NPM2_HUMAN (Q86SE8) Nucleoplasmin-2|
          Length = 214

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = +3

Query: 294 FKDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPR 416
           +++E+EE+G E+    EE++  DED D+ +E +   ++  R
Sbjct: 128 WEEEEEEEGEEEEE--EEEDDEDEDADISLEEQSPVKQVKR 166

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>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6|
          Length = 552

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPRI 190
           G P    P G+   RP   P   P   GP  PGQ+ P  +    N+  R  P +
Sbjct: 224 GGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPV 277

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>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPRI 190
           G P    P G+   RP   P   P   GP  PGQ+ P  +    N+  R  P +
Sbjct: 224 GGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPV 277

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>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6|
           (Cleavage and polyadenylation specificity factor 68 kDa
           subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor
           Im 68-kDa subunit) (Protein HPBRII-4/7)
          Length = 551

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPRI 190
           G P    P G+   RP   P   P   GP  PGQ+ P  +    N+  R  P +
Sbjct: 224 GGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPV 277

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>NDF1_RAT (Q64289) Neurogenic differentiation factor 1 (NeuroD1) (Basic|
           helix-loop-helix factor 1) (BHF-1)
          Length = 357

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 312 EDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQ 431
           E+  ED  L EE+E  +E+ D + +RRG K+K    +R +
Sbjct: 58  EEEDEDEDLEEEEEEEEEEDDQKPKRRGPKKKKMTKARLE 97

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>NDF1_CHICK (P79765) Neurogenic differentiation factor 1 (NeuroD1) (NeuroD)|
          Length = 357

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQ 431
           ++EDEED  ++    EE+E  +ED + + +RRG K+K    +R +
Sbjct: 59  EEEDEEDELDEE---EEEEEEEEDDEQKPKRRGPKKKKMTKARLE 100

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>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)|
          Length = 637

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = +2

Query: 20  NRNGPPRTRVPRGRYSLRPFPPPTKTPAGCGPAR---PGQIAPDGIGVVDNKSGRSNPRI 190
           NR  PP    P    + RP P    TPA   P R   P  +A D +G        + PR+
Sbjct: 37  NRAAPPAAVPPAAPAAYRPSPTGLPTPATTPPTRHIVPAAVAEDDVG-----GWGAQPRV 91

Query: 191 R 193
           R
Sbjct: 92  R 92

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>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2)
          Length = 889

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 20/60 (33%), Positives = 23/60 (38%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPRIRVAPAD 208
           GPP    P       P PPP   P G GPA P Q  P    +    +    PR R+   D
Sbjct: 21  GPPPPPPPAPPQQQPPPPPPPAPPPGPGPA-PPQHPPRAEALPPEAADEGGPRGRLRSRD 79

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>PTMA_PONPY (Q5R790) Prothymosin alpha [Contains: Thymosin alpha]|
          Length = 109

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRK 407
           DE+EE+G E+    EE +G +ED D + E      K
Sbjct: 52  DEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGK 87

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>PTMA_BOVIN (P01252) Prothymosin alpha [Contains: Thymosin alpha-1]|
          Length = 109

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRK 407
           DE+EE+G E+    EE +G +ED D + E      K
Sbjct: 52  DEEEEEGGEEEEEEEEGDGEEEDGDEDEEAEAATGK 87

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>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)|
          Length = 892

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 20  NRNGPPRTRVPRGRYSLRPFPPPTKTPAGCGPA 118
           ++  PP + VP    S R  PP   +P G GPA
Sbjct: 404 SKKSPPGSSVPERPLSERELPPRPDSPPGAGPA 436

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>PTMA_HUMAN (P06454) Prothymosin alpha [Contains: Thymosin alpha-1]|
          Length = 110

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRK 407
           DE+EE+G E+    EE +G +ED D + E      K
Sbjct: 53  DEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGK 88

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>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082|
          Length = 721

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 18/63 (28%), Positives = 22/63 (34%)
 Frame = +2

Query: 17  SNRNGPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPRIRV 196
           S  +GPP    P   +   P PP    P    P  P      G+G      G S P   +
Sbjct: 245 STSSGPPTAPTPTSPFGTAPMPPGPPPPGTVSPPLPPSAPAVGVG------GPSVPAAGM 298

Query: 197 APA 205
            PA
Sbjct: 299 PPA 301

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>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
 Frame = +2

Query: 17  SNRNGPPRTRVPRGRYSLRPFP-------PPTKTPAGCGPARPGQIAPDGIGVVDNKSGR 175
           S R GPP    PRG+  +  FP        P K     GP  PG   P G      K+G 
Sbjct: 560 SGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPG------KNGE 613

Query: 176 SNPR 187
           + P+
Sbjct: 614 TGPQ 617

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>WDR43_HUMAN (Q15061) WD-repeat protein 43|
          Length = 720

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRS 419
           KDED E+  EDA   +E+ G D D   E E  G     P +
Sbjct: 675 KDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPEN 715

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>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
           (Neurofilament 3)
          Length = 915

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQ 431
           D+ EE GSE     E++EG  E+ + E E  G + +A    + +
Sbjct: 545 DQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVE 588

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>PTMA_MOUSE (P26350) Prothymosin alpha [Contains: Thymosin alpha]|
          Length = 110

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEME 386
           DE+EE+G E+    EE +G +ED D + E
Sbjct: 53  DEEEEEGGEEEEEEEEGDGEEEDGDEDEE 81

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>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEME----------RRGTKRK-APRSSRXQSCGAS 446
           DED+ED  ED    +E++  DED + E E          +  TK+K AP + + +  G+ 
Sbjct: 246 DEDDEDEEEDEDEEDEEDDEDEDEEEEEEPVKAAPGKRKKEMTKQKEAPEAKKQKIEGSE 305

Query: 447 P 449
           P
Sbjct: 306 P 306

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>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 291 VFKDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAP 413
           V +DEDEE+  ED    ++++  DED D E E    + + P
Sbjct: 232 VAEDEDEEEDDEDEDDDDDEDDEDEDDDDEDEEEEEEEEEP 272

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>PTMA_XENLA (Q5U274) Prothymosin alpha|
          Length = 111

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEME 386
           DE+EE+G E+    EE +G +ED D + E
Sbjct: 54  DEEEEEGGEEEEEEEEGDGEEEDGDEDEE 82

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>PTMA_RAT (P06302) Prothymosin alpha [Contains: Thymosin alpha]|
          Length = 111

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEME 386
           DE+EE+G E+    EE +G +ED D + E
Sbjct: 53  DEEEEEGGEEEEEEEEGDGEEEDGDEDEE 81

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>NOC2L_CAEEL (O17580) Nucleolar complex protein 2 homolog (NOC2 protein homolog)|
          Length = 715

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQS 434
           D+DE+D  +D    EE+E +D+D D E +   TK K  R  + +S
Sbjct: 101 DDDEDDDEDDED--EEEEESDDDEDDEEDDDKTKIKKIRKPKIKS 143

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>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 379

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/64 (32%), Positives = 25/64 (39%)
 Frame = +2

Query: 14  VSNRNGPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPRIR 193
           VSN  GPP    P G       PPP   P   GP  P  + P G+    + +G   P   
Sbjct: 155 VSNAGGPPAP--PAGGP-----PPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 207

Query: 194 VAPA 205
             PA
Sbjct: 208 PLPA 211

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>GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 464

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRK 407
           ++DEE G +D    EEKEG D + + E E    ++K
Sbjct: 58  EDDEEKGEDDEEDDEEKEGEDGEGEEEDEEEDEEKK 93

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>YKA4_CAEEL (P34256) Hypothetical protein B0303.4|
          Length = 616

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLL--EEKEGADEDWDVEME 386
           +++D++D S+DA +   EE+EG D+D + E+E
Sbjct: 257 EEDDDDDSSDDAIIEDHEEEEGQDDDEETEIE 288

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>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
            domain-containing protein 4) (Multiple EGF-like domain
            protein 4)
          Length = 2386

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +2

Query: 74   PFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPRIR 193
            P PPP   PA  GP   G   P G G        + PR+R
Sbjct: 2071 PAPPPPPPPADGGPRGAGD--PGGAGASSGPGAPAEPRVR 2108

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>COAA1_HUMAN (Q03692) Collagen alpha-1(X) chain precursor|
          Length = 680

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/53 (33%), Positives = 20/53 (37%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPR 187
           G P TR P G   +  FP     P   GP  P  IA  G+       G   PR
Sbjct: 446 GIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPR 498

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>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
 Frame = +2

Query: 17  SNRNGPPRTRVPRGRYSLRPFP-------PPTKTPAGCGPARPGQIAPDGIGVVDNKSGR 175
           S R GPP    PRG+  +  FP        P K     GP  PG   P G      K+G 
Sbjct: 559 SGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGLPGPAG------KNGE 612

Query: 176 SNPR 187
           + P+
Sbjct: 613 TGPQ 616

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>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
 Frame = +2

Query: 17  SNRNGPPRTRVPRGRYSLRPFP-------PPTKTPAGCGPARPGQIAPDGIGVVDNKSGR 175
           S R GPP    PRG+  +  FP        P K     GP  PG   P G      K+G 
Sbjct: 559 SGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGLPGPAG------KNGE 612

Query: 176 SNPR 187
           + P+
Sbjct: 613 TGPQ 616

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>RL32_HALMA (P12736) 50S ribosomal protein L32e (Hl5)|
          Length = 240

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 303 EDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAP 413
           E EE+G E+AP        DED + E++ RG   K P
Sbjct: 79  EVEEEGGEEAP--------DEDVETELQARGLTEKTP 107

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>RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (RGP3)|
          Length = 1198

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 306  DEEDGSEDAPLLEEKEGA-DEDWDVEMERRGTKRKAPRSSRXQS 434
            DEED  E   + E +EG  DED D   +  G + +A RSS  ++
Sbjct: 878  DEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIET 921

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>RGP1_MOUSE (P46061) Ran GTPase-activating protein 1|
          Length = 589

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPR 416
           +DEDEE+  E+    EE E  +ED D E E +  + + P+
Sbjct: 363 EDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEEEEEPPQ 402

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>AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Leucine-rich acidic nuclear protein)
          Length = 247

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEME 386
           +DEDEE+  E A L+E++E  DE+ + E E
Sbjct: 170 EDEDEEEYDEYAQLVEDEEEEDEEEEGEEE 199

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>AN32A_MOUSE (O35381) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Potent heat-stable protein phosphatase 2A
           inhibitor I1PP2A) (Acidic nuclear phosphoprotein pp32)
           (Cerebellar leucine-rich acidic nuclear protein)
          Length = 247

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEME 386
           +DEDEE+  E A L+E++E  DE+ + E E
Sbjct: 170 EDEDEEEYDEYAQLVEDEEEEDEEEEGEEE 199

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>SPDYC_HUMAN (Q5MJ68) Speedy protein C (Rapid inducer of G2/M progression in|
           oocytes C) (RINGO C) (hSpy/Ringo C)
          Length = 293

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 32  PPRTRVPRGRYSLRPFPPPTKTPAGCGPARPG 127
           PP+ ++  G YSLR FP P        PARPG
Sbjct: 269 PPQMQLEPGTYSLRIFPKP--------PARPG 292

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>HEM1_STRAW (Q82E77) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 569

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 70  EGVAATWNARTGRPVAVRYEAP 5
           E VAA    RTG PVAVR E P
Sbjct: 271 EAVAAAVEGRTGTPVAVREETP 292

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>SWR1_SCHPO (O13682) Helicase swr1 (EC 3.6.1.-)|
          Length = 1288

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSR 425
           ++E+ E+ S+D PL  E E  +ED D+  E    KRK    +R
Sbjct: 278 REEEAEETSDDEPLSSEDE-ENEDEDITEESNLRKRKVSDKTR 319

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>YBX2B_XENLA (P45441) Y-box-binding protein 2-B (Cytoplasmic RNA-binding protein|
           p54) (mRNP3)
          Length = 324

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +2

Query: 32  PPRTRVPRGRYSLRPFPPPTKTPAG 106
           PPR    R R   RP PPP +TP G
Sbjct: 225 PPRRFQQRFRRPFRPRPPPPQTPEG 249

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>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding|
           protein) (FRGY2 homolog)
          Length = 360

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 32  PPRTRVPRGRYSLRPFPP--PTKTPAGCGPARPGQIAPDG 145
           PPR R PR R   RP PP  PT T  G G  +P Q   DG
Sbjct: 276 PPRFR-PRYRRPFRPRPPQQPT-TEGGDGETKPSQGPTDG 313

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>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain|
          Length = 1049

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
 Frame = +2

Query: 17  SNRNGPPRTRVPRGRYSLRPFP-------PPTKTPAGCGPARPGQIAPDGIGVVDNKSGR 175
           + R GPP +  PRG+  +  FP        P K     GP  PG   P G      K+G 
Sbjct: 404 TGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPAG------KNGE 457

Query: 176 SNPR 187
           + P+
Sbjct: 458 TGPQ 461



 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGCGPARP----GQIAPDGIGVVDNKSGRSNPR 187
           GPP T    G      +  P   P   GPA P    G I P G      + GR  PR
Sbjct: 30  GPPGTSGHPGAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRPGRPGPR 86

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>EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1210

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGT--KRKAPRSSRXQSCGASP 449
           ++E+EE+  E+    EE+E  DE+   + +R G+  +RKA +  R  S    P
Sbjct: 303 EEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWRKDSPWVKP 355

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>SWR1_GIBZE (Q4IAK7) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1691

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLL--EEKEGADED 368
           +DED+EDG  D+ ++  +E+EG +ED
Sbjct: 495 EDEDDEDGDADSDIMSSDEEEGDEED 520

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>EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1263

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGT--KRKAPRSSRXQSCGASP 449
           ++E+EE+  E+    EE+E  DE+   + +R G+  +RKA +  R  S    P
Sbjct: 356 EEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWRKDSPWVKP 408

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>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)|
          Length = 877

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/42 (42%), Positives = 19/42 (45%)
 Frame = +2

Query: 14  VSNRNGPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAP 139
           V  + GPP      GR    P PP T  PA   P RPG  AP
Sbjct: 771 VRGKPGPPAQSSLGGRNP--PLPPSTGRPAPAIPNRPGGGAP 810

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>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12|
          Length = 509

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEME 386
           +EDEE+  ED    EEKE  D+D D E E
Sbjct: 54  EEDEEEDEEDEEDEEEKEEDDDDDDDEEE 82

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>VGLD_PRVRI (P07645) Protein gp50|
          Length = 402

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 29  GPPRTRVPRGRYSLRPFPPPTKTPAGC-GPARPGQ 130
           G P  R PR     RPF PP   P+G   PA P Q
Sbjct: 306 GRPTPRPPRPETPHRPFAPPAVVPSGWPQPAEPFQ 340

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>YCF1_PINTH (P41647) Hypothetical 205.3 kDa protein ycf1 (ORF 1756)|
          Length = 1756

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +3

Query: 276  VGWQYVFKDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRK 407
            +G +   K++  EDG +    +E+++G D+D  VE ++   K+K
Sbjct: 1462 IGIRSNVKNKQVEDGQDKNGQVEDQDGQDQDGQVEDQQTDGKKK 1505

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>BFR2_ASPFU (Q4WMI1) Protein bfr2|
          Length = 565

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQS 434
           +  DEE+ SED    + + G+DED D   E    + +  R+S   S
Sbjct: 92  RSSDEEEDSEDEEEEDSELGSDEDEDASEESEEERPQRSRTSAKDS 137

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>MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein)|
          Length = 4910

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = +3

Query: 309  EEDGSEDAPLLEEKEGADEDWDV------EMERRGTKRKA 410
            EED  E    L+E+EGA+ED D+      E E  G + +A
Sbjct: 4312 EEDAGETETALDEEEGAEEDVDMTNDEGKEDEENGPEEQA 4351

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>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 291 VFKDEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAP 413
           V ++ED+E+  ED    +++E  DED D E E     + AP
Sbjct: 238 VAEEEDDEEEDEDDEDEDDEEEDDEDDDEEEEEEEPVKAAP 278

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>CRX_CANFA (Q8SQ03) Cone-rod homeobox protein|
          Length = 299

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
 Frame = +2

Query: 23  RNGPPRTRVPRGRYSLRPFPP-------PTKTPAGCGPARPGQIAPDGIGVVDNKS 169
           +N   + R  R +   +P PP       P K  AG  P     + PD +G+ D+ S
Sbjct: 88  KNRRAKCRQQRQQQKEQPQPPGAQTKARPAKRKAGMSPRSSSDVCPDPLGISDSYS 143

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>AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member B (PHAPI2 protein) (Silver-stainable protein
           SSP29) (Acidic protein rich in leucines)
          Length = 251

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 300 DEDEEDGSEDAP---LLEEKEGADEDWDVEMERRGTKRK 407
           DED+++ SE+     L EE E  DED + E   +G KRK
Sbjct: 203 DEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRK 241

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>RGP1_HUMAN (P46060) Ran GTPase-activating protein 1|
          Length = 587

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVEMERRGTKRKAPRSSRXQSCGAS 446
           +E+EE+G E+    EE+E  DE+ + E E    +    R    +S   S
Sbjct: 363 EEEEEEGEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGEKSATPS 411

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>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/57 (35%), Positives = 23/57 (40%)
 Frame = +2

Query: 17  SNRNGPPRTRVPRGRYSLRPFPPPTKTPAGCGPARPGQIAPDGIGVVDNKSGRSNPR 187
           S+  GPPR  VPR      P   P   P   G ARP   +  G G      G + PR
Sbjct: 233 SSAGGPPRP-VPRPGPRPSPMNMPASRPTPPGGARPSTSSRSGGGRGRGGGGGAGPR 288

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>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMERR 392
           +D+DEED  ED    EE E  +E+ + E E++
Sbjct: 636 EDDDEEDDDEDEDEDEEDEEEEEEEEEESEKK 667

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>SP6D_BACSU (P37963) Stage VI sporulation protein D|
          Length = 575

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +3

Query: 300 DEDEEDGSEDAP-LLEEKEGADEDWDVEMERRGTKRKAPRSSRXQS 434
           +++EED    AP LLEE+E  +E +++E+ +  +  +    +  QS
Sbjct: 423 EQEEEDSFYSAPKLLEEEEQEEESFEIEVRKTPSAEEPKEETPFQS 468

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>BFR2_NEUCR (Q7S6P8) Protein bfr-2|
          Length = 636

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKEGADEDWDVE 380
           DED+E+GS D    E+ E  DED D E
Sbjct: 265 DEDDEEGSGDEDEDEDDEDEDEDEDDE 291

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>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
 Frame = +2

Query: 29   GPPRTRVPRGRYSLRPFPPPTKTPAGCG----PARPGQIAPDGIGVVDNKSGRSNPRIRV 196
            GPP  R P+G      FP P   P   G    P  PGQ    G      K+G   P   V
Sbjct: 911  GPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQRGETGF---QGKTGPPGPGGVV 967

Query: 197  AP 202
             P
Sbjct: 968  GP 969

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>BFR2_CRYNE (Q5KBS9) Protein BFR2|
          Length = 463

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 300 DEDEEDGSEDAPLLEEKE-GADEDWDVE 380
           DEDEED  ED    +E E G DED D E
Sbjct: 115 DEDEEDEDEDEEESDEDEQGEDEDEDEE 142

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>CCD96_MOUSE (Q9CR92) Coiled-coil domain-containing protein 96|
          Length = 584

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 297 KDEDEEDGSEDAPLLEEKEGADEDWDVEMER-RGTKRKAPRSSRXQS 434
           KDEDE++  ++    +E E  DED   E +R    K K  R  R +S
Sbjct: 120 KDEDEDEDEDEDEDEDEDEDEDEDEGEERDRPEKPKGKGKREKRKES 166


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.132    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,881,489
Number of Sequences: 219361
Number of extensions: 749088
Number of successful extensions: 4222
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 3145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4059
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result