ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 1e-16
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
3gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
4gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
5gb|AC084610.1|CBRG44C02 Caenorhabditis briggsae cosmid G44C02, c... 42 1.4
6gb|AC092479.16| Mus musculus strain C57BL/6J chromosome 3 clone ... 42 1.4
7gb|AC093317.22| Mus musculus strain C57BL/6J chromosome 3 clone ... 42 1.4
8emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chrom... 42 1.4
9gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, com... 40 5.5
10gb|AC136730.9| Mus musculus chromosome 19, clone RP23-76E22, com... 40 5.5
11ref|NM_144530.3| Mus musculus zinc finger CCCH type containing 1... 40 5.5
12ref|NM_014827.3| Homo sapiens zinc finger CCCH-type containing 1... 40 5.5
13ref|XM_981077.1| PREDICTED: Mus musculus similar to Zinc finger ... 40 5.5
14ref|XM_992782.1| PREDICTED: Mus musculus similar to Zinc finger ... 40 5.5
15ref|XM_001001907.1| PREDICTED: Mus musculus similar to Zinc fing... 40 5.5
16gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete... 40 5.5
17gb|AC163221.4| Mus musculus chromosome 19, clone RP23-376A6, com... 40 5.5
18emb|AL589663.19| Human DNA sequence from clone RP11-470H9 on chr... 40 5.5
19emb|BX957219.1| Methanococcus maripaludis S2 complete genome; se... 40 5.5
20emb|AJ584654.1| Human coxsackievirus A18 partial VP1 gene for ca... 40 5.5
21emb|BX649148.1|HSM809300 Homo sapiens mRNA; cDNA DKFZp686F14109 ... 40 5.5
22emb|CR627446.1| Homo sapiens mRNA; cDNA DKFZp686D03108 (from clo... 40 5.5
23emb|CR627439.1| Homo sapiens mRNA; cDNA DKFZp781G2455 (from clon... 40 5.5
24emb|BX648271.1|HSM808419 Homo sapiens mRNA; cDNA DKFZp686C10119 ... 40 5.5
25dbj|AK090844.1| Homo sapiens cDNA FLJ33525 fis, clone BRAMY2006779 40 5.5
26ref|NM_170161.1| Drosophila melanogaster CG31125-PA (CG31125) mR... 40 5.5
27gb|AC114402.2| Homo sapiens chromosome 1 clone RP11-397P13, comp... 40 5.5
28gb|AY095094.1| Drosophila melanogaster SD02419 full insert cDNA 40 5.5
29gb|AC124338.11| Mus musculus chromosome 1, clone RP24-200D3, com... 40 5.5
30gb|AC018868.4| Homo sapiens BAC clone RP11-83J16 from 15, comple... 40 5.5
31dbj|AK148376.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-len... 40 5.5
32emb|CR523399.1| Gallus gallus finished cDNA, clone ChEST309i19 40 5.5
33ref|NM_073424.2| Caenorhabditis elegans H19N07.2a (H19N07.2) mRN... 40 5.5
34ref|NM_001028841.2| Caenorhabditis elegans H19N07.2c (H19N07.2) ... 40 5.5
35ref|NM_073425.3| Caenorhabditis elegans H19N07.2b (H19N07.2) mRN... 40 5.5
36gb|BC066848.1| Mus musculus zinc finger CCCH type containing 11A... 40 5.5
37gb|AC008237.4|AC008237 Drosophila melanogaster, chromosome 3R, r... 40 5.5
38gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, r... 40 5.5
39gb|AC107426.13| Homo sapiens 3 BAC RP11-573F3 (Roswell Park Canc... 40 5.5
40gb|AC102178.21| Mus musculus chromosome 7, clone RP24-70C24, com... 40 5.5
41dbj|AK122341.2| Mus musculus mRNA for mKIAA0663 protein 40 5.5
42gb|AE003748.3| Drosophila melanogaster chromosome 3R, section 86... 40 5.5
43emb|Z92835.1|CEH19N07 Caenorhabditis elegans Fosmid H19N07, comp... 40 5.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 129/156 (82%)
 Strand = Plus / Plus

                                                                          
Query: 248    atctcaaagtacgagaaacagattgaggacctaaccagccaatgcaccagcaagtccgat 307
              ||||||||||| ||||||||||||||||| ||||||| ||| |||| ||  ||||| |||
Sbjct: 765678 atctcaaagtatgagaaacagattgaggagctaaccaaccagtgcaacatgaagtctgat 765737

                                                                          
Query: 308    gagtgctccatggcatggtctttagtagaatctaccaaccaagaacttgacaggctgaag 367
              || || |  ||||| ||||||| ||| ||||||||||| || || ||||| || || |||
Sbjct: 765738 gaatgttatatggcgtggtcttcagtggaatctaccaatcaggagcttgagagacttaag 765797

                                                  
Query: 368    atggagcttcaccaaaagcttgtgcaaagtgataat 403
              || |||||||| || ||| |  ||||||||||||||
Sbjct: 765798 atagagcttcatcagaaggtcatgcaaagtgataat 765833



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 4      cgcggtggtcggaggtaacaggccccttcaggtgc 38
              ||||||||| ||||||||||| |||||||||||||
Sbjct: 765287 cgcggtggttggaggtaacagaccccttcaggtgc 765321



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                               
Query: 78     tcatcaacttcaagggagtaagagggaaccccatggtttgtggcatctg 126
              |||| |||||||| |||||||| || |  ||||||||||||||||||||
Sbjct: 765361 tcataaacttcaaaggagtaaggggaagtcccatggtttgtggcatctg 765409
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 129/156 (82%)
 Strand = Plus / Plus

                                                                          
Query: 248    atctcaaagtacgagaaacagattgaggacctaaccagccaatgcaccagcaagtccgat 307
              ||||||||||| ||||||||||||||||| ||||||| ||| |||| ||  ||||| |||
Sbjct: 765676 atctcaaagtatgagaaacagattgaggagctaaccaaccagtgcaacatgaagtctgat 765735

                                                                          
Query: 308    gagtgctccatggcatggtctttagtagaatctaccaaccaagaacttgacaggctgaag 367
              || || |  ||||| ||||||| ||| ||||||||||| || || ||||| || || |||
Sbjct: 765736 gaatgttatatggcgtggtcttcagtggaatctaccaatcaggagcttgagagacttaag 765795

                                                  
Query: 368    atggagcttcaccaaaagcttgtgcaaagtgataat 403
              || |||||||| || ||| |  ||||||||||||||
Sbjct: 765796 atagagcttcatcagaaggtcatgcaaagtgataat 765831



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 4      cgcggtggtcggaggtaacaggccccttcaggtgc 38
              ||||||||| ||||||||||| |||||||||||||
Sbjct: 765285 cgcggtggttggaggtaacagaccccttcaggtgc 765319



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                               
Query: 78     tcatcaacttcaagggagtaagagggaaccccatggtttgtggcatctg 126
              |||| |||||||| |||||||| || |  ||||||||||||||||||||
Sbjct: 765359 tcataaacttcaaaggagtaaggggaagtcccatggtttgtggcatctg 765407
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>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090O10, complete sequence
          Length = 162132

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 129/156 (82%)
 Strand = Plus / Plus

                                                                         
Query: 248   atctcaaagtacgagaaacagattgaggacctaaccagccaatgcaccagcaagtccgat 307
             ||||||||||| ||||||||||||||||| ||||||| ||| |||| ||  ||||| |||
Sbjct: 61223 atctcaaagtatgagaaacagattgaggagctaaccaaccagtgcaacatgaagtctgat 61282

                                                                         
Query: 308   gagtgctccatggcatggtctttagtagaatctaccaaccaagaacttgacaggctgaag 367
             || || |  ||||| ||||||| ||| ||||||||||| || || ||||| || || |||
Sbjct: 61283 gaatgttatatggcgtggtcttcagtggaatctaccaatcaggagcttgagagacttaag 61342

                                                 
Query: 368   atggagcttcaccaaaagcttgtgcaaagtgataat 403
             || |||||||| || ||| |  ||||||||||||||
Sbjct: 61343 atagagcttcatcagaaggtcatgcaaagtgataat 61378



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 4     cgcggtggtcggaggtaacaggccccttcaggtgc 38
             ||||||||| ||||||||||| |||||||||||||
Sbjct: 60832 cgcggtggttggaggtaacagaccccttcaggtgc 60866



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 78    tcatcaacttcaagggagtaagagggaaccccatggtttgtggcatctg 126
             |||| |||||||| |||||||| || |  ||||||||||||||||||||
Sbjct: 60906 tcataaacttcaaaggagtaaggggaagtcccatggtttgtggcatctg 60954
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>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16,
              complete sequence
          Length = 160053

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 129/156 (82%)
 Strand = Plus / Plus

                                                                          
Query: 248    atctcaaagtacgagaaacagattgaggacctaaccagccaatgcaccagcaagtccgat 307
              ||||||||||| ||||||||||||||||| ||||||| ||| |||| ||  ||||| |||
Sbjct: 151559 atctcaaagtatgagaaacagattgaggagctaaccaaccagtgcaacatgaagtctgat 151618

                                                                          
Query: 308    gagtgctccatggcatggtctttagtagaatctaccaaccaagaacttgacaggctgaag 367
              || || |  ||||| ||||||| ||| ||||||||||| || || ||||| || || |||
Sbjct: 151619 gaatgttatatggcgtggtcttcagtggaatctaccaatcaggagcttgagagacttaag 151678

                                                  
Query: 368    atggagcttcaccaaaagcttgtgcaaagtgataat 403
              || |||||||| || ||| |  ||||||||||||||
Sbjct: 151679 atagagcttcatcagaaggtcatgcaaagtgataat 151714



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 4      cgcggtggtcggaggtaacaggccccttcaggtgc 38
              ||||||||| ||||||||||| |||||||||||||
Sbjct: 151168 cgcggtggttggaggtaacagaccccttcaggtgc 151202



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                               
Query: 78     tcatcaacttcaagggagtaagagggaaccccatggtttgtggcatctg 126
              |||| |||||||| |||||||| || |  ||||||||||||||||||||
Sbjct: 151242 tcataaacttcaaaggagtaaggggaagtcccatggtttgtggcatctg 151290
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>gb|AC084610.1|CBRG44C02 Caenorhabditis briggsae cosmid G44C02, complete sequence
          Length = 41805

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 113 gtttgtggcatctgcgttcggaaag 137
           ||||||||||||||| |||||||||
Sbjct: 344 gtttgtggcatctgctttcggaaag 320
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>gb|AC092479.16| Mus musculus strain C57BL/6J chromosome 3 clone rp23-231l15, complete
            sequence
          Length = 142159

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 242  aaactgatctcaaagtacgagaaac 266
            |||||||||||||||||| ||||||
Sbjct: 3375 aaactgatctcaaagtactagaaac 3351
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>gb|AC093317.22| Mus musculus strain C57BL/6J chromosome 3 clone rp23-218k6, complete
              sequence
          Length = 214004

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 242    aaactgatctcaaagtacgagaaac 266
              |||||||||||||||||| ||||||
Sbjct: 142618 aaactgatctcaaagtactagaaac 142594
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>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete
              sequence
          Length = 209914

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 276    acctaaccagccaatgcacca 296
              |||||||||||||||||||||
Sbjct: 145633 acctaaccagccaatgcacca 145613
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>gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, complete sequence
          Length = 174202

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    agaacttgacaggctgaaga 368
              ||||||||||||||||||||
Sbjct: 154027 agaacttgacaggctgaaga 154046
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>gb|AC136730.9| Mus musculus chromosome 19, clone RP23-76E22, complete sequence
          Length = 146616

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     ttcaagggagtaagagggaa 105
              ||||||||||||||||||||
Sbjct: 110083 ttcaagggagtaagagggaa 110064
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>ref|NM_144530.3| Mus musculus zinc finger CCCH type containing 11A (Zc3h11a), mRNA
          Length = 3603

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 210 agatttcttcacctattcagaaaa 233
           ||||||||||||||||| ||||||
Sbjct: 580 agatttcttcacctattaagaaaa 557
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>ref|NM_014827.3| Homo sapiens zinc finger CCCH-type containing 11A (ZC3H11A), mRNA
          Length = 8054

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 3244 agatttcttcacctattaagaaaa 3221
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>ref|XM_981077.1| PREDICTED: Mus musculus similar to Zinc finger BED domain containing
            protein 4 (LOC669797), mRNA
          Length = 9552

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 6460 agatttcttcacctattaagaaaa 6437
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>ref|XM_992782.1| PREDICTED: Mus musculus similar to Zinc finger BED domain containing
            protein 4 (LOC675760), mRNA
          Length = 10034

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 6949 agatttcttcacctattaagaaaa 6926
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>ref|XM_001001907.1| PREDICTED: Mus musculus similar to Zinc finger BED domain containing
            protein 4 (LOC667118), mRNA
          Length = 10058

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 6967 agatttcttcacctattaagaaaa 6944
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>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence
          Length = 213811

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    agaacttgacaggctgaaga 368
              ||||||||||||||||||||
Sbjct: 114012 agaacttgacaggctgaaga 113993
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>gb|AC163221.4| Mus musculus chromosome 19, clone RP23-376A6, complete sequence
          Length = 188740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     ttcaagggagtaagagggaa 105
              ||||||||||||||||||||
Sbjct: 174579 ttcaagggagtaagagggaa 174560
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>emb|AL589663.19| Human DNA sequence from clone RP11-470H9 on chromosome 1 Contains the
            5' end of the NRD1 gene for nardilysin (N-arginine
            dibasic convertase), a C1orf19 pseudogene and the 3' end
            of the RAB3B gene for RAB3B member RAS oncogene family,
            complete sequence
          Length = 104941

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  acttgacaggctgaagatgg 371
            ||||||||||||||||||||
Sbjct: 8920 acttgacaggctgaagatgg 8901
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>emb|BX957219.1| Methanococcus maripaludis S2 complete genome; segment 1/5
          Length = 345730

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ttcaccaaaagcttgtgcaa 394
              ||||||||||||||||||||
Sbjct: 102288 ttcaccaaaagcttgtgcaa 102307
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>emb|AJ584654.1| Human coxsackievirus A18 partial VP1 gene for capsid protein,
           genomic RNA
          Length = 321

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 ctaccaaccaagaacttgac 358
           ||||||||||||||||||||
Sbjct: 295 ctaccaaccaagaacttgac 314
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>emb|BX649148.1|HSM809300 Homo sapiens mRNA; cDNA DKFZp686F14109 (from clone DKFZp686F14109)
          Length = 8423

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 3734 agatttcttcacctattaagaaaa 3711
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>emb|CR627446.1| Homo sapiens mRNA; cDNA DKFZp686D03108 (from clone DKFZp686D03108)
          Length = 8054

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 3244 agatttcttcacctattaagaaaa 3221
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>emb|CR627439.1| Homo sapiens mRNA; cDNA DKFZp781G2455 (from clone DKFZp781G2455)
          Length = 5894

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 1143 agatttcttcacctattaagaaaa 1120
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>emb|BX648271.1|HSM808419 Homo sapiens mRNA; cDNA DKFZp686C10119 (from clone DKFZp686C10119)
          Length = 4356

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 2932 agatttcttcacctattaagaaaa 2909
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>dbj|AK090844.1| Homo sapiens cDNA FLJ33525 fis, clone BRAMY2006779
          Length = 2763

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 acttgacaggctgaagatgg 371
           ||||||||||||||||||||
Sbjct: 437 acttgacaggctgaagatgg 456
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>ref|NM_170161.1| Drosophila melanogaster CG31125-PA (CG31125) mRNA, complete cds
          Length = 1455

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  acaataaaactgatctcaaa 255
            ||||||||||||||||||||
Sbjct: 1435 acaataaaactgatctcaaa 1454
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>gb|AC114402.2| Homo sapiens chromosome 1 clone RP11-397P13, complete sequence
          Length = 179308

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 210    agatttcttcacctattcagaaaa 233
              ||||||||||||||||| ||||||
Sbjct: 111651 agatttcttcacctattaagaaaa 111628
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>gb|AY095094.1| Drosophila melanogaster SD02419 full insert cDNA
          Length = 1469

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  acaataaaactgatctcaaa 255
            ||||||||||||||||||||
Sbjct: 1435 acaataaaactgatctcaaa 1454
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>gb|AC124338.11| Mus musculus chromosome 1, clone RP24-200D3, complete sequence
          Length = 165770

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 210   agatttcttcacctattcagaaaa 233
             ||||||||||||||||| ||||||
Sbjct: 64615 agatttcttcacctattaagaaaa 64592
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>gb|AC018868.4| Homo sapiens BAC clone RP11-83J16 from 15, complete sequence
          Length = 162100

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   taaaactgatctcaaagtac 259
             ||||||||||||||||||||
Sbjct: 63348 taaaactgatctcaaagtac 63367
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>dbj|AK148376.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library,
            clone:G370118L05 product:unclassifiable, full insert
            sequence
          Length = 1285

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 1094 agatttcttcacctattaagaaaa 1071
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>emb|CR523399.1| Gallus gallus finished cDNA, clone ChEST309i19
          Length = 1118

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 1062 agatttcttcacctattaagaaaa 1039
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>ref|NM_073424.2| Caenorhabditis elegans H19N07.2a (H19N07.2) mRNA, complete cds
          Length = 3532

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  aaagtacgagaaacagattg 272
            ||||||||||||||||||||
Sbjct: 1707 aaagtacgagaaacagattg 1688
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>ref|NM_001028841.2| Caenorhabditis elegans H19N07.2c (H19N07.2) mRNA, complete cds
          Length = 4136

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  aaagtacgagaaacagattg 272
            ||||||||||||||||||||
Sbjct: 1707 aaagtacgagaaacagattg 1688
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>ref|NM_073425.3| Caenorhabditis elegans H19N07.2b (H19N07.2) mRNA, complete cds
          Length = 4179

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  aaagtacgagaaacagattg 272
            ||||||||||||||||||||
Sbjct: 1707 aaagtacgagaaacagattg 1688
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>gb|BC066848.1| Mus musculus zinc finger CCCH type containing 11A, mRNA (cDNA clone
           MGC:76656 IMAGE:30471872), complete cds
          Length = 3603

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 210 agatttcttcacctattcagaaaa 233
           ||||||||||||||||| ||||||
Sbjct: 580 agatttcttcacctattaagaaaa 557
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>gb|AC008237.4|AC008237 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone
              BACR47D16, complete sequence
          Length = 200216

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    acaataaaactgatctcaaa 255
              ||||||||||||||||||||
Sbjct: 185723 acaataaaactgatctcaaa 185704
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>gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone
             BACR35N03, complete sequence
          Length = 169271

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   acaataaaactgatctcaaa 255
             ||||||||||||||||||||
Sbjct: 89660 acaataaaactgatctcaaa 89679
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>gb|AC107426.13| Homo sapiens 3 BAC RP11-573F3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114540

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaaaggacaataaaactgat 249
             ||||||||||||||||||||
Sbjct: 64418 aaaaggacaataaaactgat 64399
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>gb|AC102178.21| Mus musculus chromosome 7, clone RP24-70C24, complete sequence
          Length = 190370

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 183   tatgcaaaaagtgtttaactgttg 206
             |||||||||||||||||| |||||
Sbjct: 59899 tatgcaaaaagtgtttaagtgttg 59922
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>dbj|AK122341.2| Mus musculus mRNA for mKIAA0663 protein
          Length = 5376

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  agatttcttcacctattcagaaaa 233
            ||||||||||||||||| ||||||
Sbjct: 3303 agatttcttcacctattaagaaaa 3280
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>gb|AE003748.3| Drosophila melanogaster chromosome 3R, section 86 of 118 of the complete
              sequence
          Length = 253272

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    acaataaaactgatctcaaa 255
              ||||||||||||||||||||
Sbjct: 196418 acaataaaactgatctcaaa 196399
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>emb|Z92835.1|CEH19N07 Caenorhabditis elegans Fosmid H19N07, complete sequence
          Length = 11966

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  aaagtacgagaaacagattg 272
            ||||||||||||||||||||
Sbjct: 6328 aaagtacgagaaacagattg 6309


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,596,143
Number of Sequences: 3902068
Number of extensions: 3596143
Number of successful extensions: 71522
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71382
Number of HSP's gapped (non-prelim): 140
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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