Clone Name | bastl20g03 |
---|---|
Clone Library Name | barley_pub |
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 73.9 bits (180), Expect = 2e-13 Identities = 45/78 (57%), Positives = 50/78 (64%), Gaps = 12/78 (15%) Frame = +3 Query: 252 RGGRERGLCFASLG---------GRPSRRTVRSKAPVGALAERVVLTSAPAER---VARP 395 RGG G+CFAS+ G RRT RS APVGAL ERVV+ AP E+ RP Sbjct: 2 RGGA--GMCFASMEAAGSRGMGKGASRRRTARSTAPVGALVERVVVAPAPVEQQRGAGRP 59 Query: 396 EAHPQSVAAEAVVTVRRK 449 EAHPQSVAA AVVTVRR+ Sbjct: 60 EAHPQSVAARAVVTVRRR 77
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 36.2 bits (82), Expect = 0.039 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Frame = +3 Query: 192 MELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAERVV-LTS 368 MEL G + AA + + APR G L FA L P R R K V A++E V L + Sbjct: 1 MELTGLTRAAAAATVTPPAPRRGWGE-LRFAPL--LPGERHGRRKVVVAAISEEVPRLAA 57 Query: 369 APAERV-----ARPEAHPQSVAAEAVVTVRRK 449 +P+ + P+ VA A +TVRRK Sbjct: 58 SPSSGIKGGGAGERRPAPEKVALRAALTVRRK 89
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 35.4 bits (80), Expect = 0.066 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 1/113 (0%) Frame = -3 Query: 439 TVTTASAATLCGCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSR 260 T TTA A T A+G+A +A A TT +A APT A + P + S+ Sbjct: 69 TTTTAPATT----AAGKAPTTAAATAPTTAAAGAPTTATGKAPATAAAP---VPTTAASK 121 Query: 259 PPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSS-AQISKVKIARRGRNGS 104 P AA A +++ + ERS+ SS + VK ++R GS Sbjct: 122 APTTAAAATHSTAAAAAPTTAASAAKSKERSTSSSSEEEHCHVKPSKREMCGS 174
>MYO1F_HUMAN (O00160) Myosin If (Myosin-IE)| Length = 1098 Score = 34.3 bits (77), Expect = 0.15 Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 5/120 (4%) Frame = -3 Query: 427 ASAATLCGCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEG-----LPPRLAKQSPRS 263 +S T G A G+ S+ A TR+A AP +DR + LP + Sbjct: 922 SSKPTRKGMAKGKPRRSSQAP---TRAAPAPPRGMDRNGVPPSARGGPLPLEIMSGGGTH 978 Query: 262 RPPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQG 83 RPPRG PS+S+G R+ PPS + + +G G R G Sbjct: 979 RPPRGP-------------PSTSLGASRRPRARPPSEHNTEFLNVPDQGMAGMQRKRSVG 1025
>SLD3_SCHPO (Q09761) DNA replication regulator sld3| Length = 668 Score = 33.9 bits (76), Expect = 0.19 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Frame = -3 Query: 358 TTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMT 179 +++ R L++ L+ LP R K S PPR + ++ A + LP ++ G Sbjct: 406 SSKFPRITRNLLEKCNGLDLLPERSHKHR-HSAPPRSKLISSKSEAGRA-LPGNTSGASI 463 Query: 178 VERSSPPSSAQISK-VKIARRGRNGSG 101 SSP S A ISK +I +R R+ SG Sbjct: 464 SNTSSPHSEASISKDYEILKRRRSNSG 490
>TYPH_BURPS (Q63IV6) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)| Length = 440 Score = 33.5 bits (75), Expect = 0.25 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 16/84 (19%) Frame = +3 Query: 240 TAAPRGGRERGLCFA------SLGG-----RPSRRTVRSKAPVGALAER----VVLTSAP 374 T A R R + FA ++GG +RR +R+ GA AER V P Sbjct: 265 TGAARPARLEAVSFALAAQMLTMGGLAADAHDARRRLRAVLESGAAAERFARMVAALGGP 324 Query: 375 AERVARPEAH-PQSVAAEAVVTVR 443 A+ V RPE H P++ AA V R Sbjct: 325 ADLVERPERHLPRAAAAAPVAAAR 348
>TYPH_BURMA (Q62EC5) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)| Length = 440 Score = 33.5 bits (75), Expect = 0.25 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 16/84 (19%) Frame = +3 Query: 240 TAAPRGGRERGLCFA------SLGG-----RPSRRTVRSKAPVGALAER----VVLTSAP 374 T A R R + FA ++GG +RR +R+ GA AER V P Sbjct: 265 TGAARPARLEAVSFALAAQMLTMGGLAADAHDARRRLRAVLESGAAAERFARMVAALGGP 324 Query: 375 AERVARPEAH-PQSVAAEAVVTVR 443 A+ V RPE H P++ AA V R Sbjct: 325 ADLVERPERHLPRAAAAAPVAAAR 348
>KKCC1_RAT (P97756) Calcium/calmodulin-dependent protein kinase kinase 1 (EC| 2.7.11.17) (Calcium/calmodulin-dependent protein kinase kinase alpha) (CaM-kinase kinase alpha) (CaM-KK alpha) (CaMKK alpha) (alpha CaMKK) (CaMKK 1) (CaM-kinase IV kinase) Length = 505 Score = 32.3 bits (72), Expect = 0.56 Identities = 22/69 (31%), Positives = 29/69 (42%) Frame = +3 Query: 57 PRSRARSISPCPASRPDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRSFLQAAGSA 236 PR+RA S+ P ASRP P RP + + G L + P + G A Sbjct: 46 PRARAASVIPGSASRPTPVRPSLSARKFSLQERPAGSCLEAQVGP---------YSTGPA 96 Query: 237 STAAPRGGR 263 S +PR R Sbjct: 97 SHMSPRAWR 105
>KKCC1_MOUSE (Q8VBY2) Calcium/calmodulin-dependent protein kinase kinase 1 (EC| 2.7.11.17) (Calcium/calmodulin-dependent protein kinase kinase alpha) (CaM-kinase kinase alpha) (CaM-KK alpha) (CaMKK alpha) (CaMKK 1) (CaM-kinase IV kinase) Length = 505 Score = 32.3 bits (72), Expect = 0.56 Identities = 22/69 (31%), Positives = 29/69 (42%) Frame = +3 Query: 57 PRSRARSISPCPASRPDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRSFLQAAGSA 236 PR+RA S+ P ASRP P RP + + G L + P + G A Sbjct: 46 PRARAASVIPGSASRPTPVRPSLSARKFSLQERPAGSCLGAQVGP---------YSTGPA 96 Query: 237 STAAPRGGR 263 S +PR R Sbjct: 97 SHISPRSWR 105
>UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 31.6 bits (70), Expect = 0.95 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +2 Query: 50 QPSKIQSEKHIPLPGQPP*PISSPASDXXXXXXXXXXXXXSFYGHAADGAAGEILLAGGR 229 QPS+ ++ +P P P P SSPAS G+A AG+ +G Sbjct: 301 QPSRTENRDPLPNPWAPQTPQSSPASGSTGSTTNTVSTSA---GNATSTPAGQ-GTSGPN 356 Query: 230 LCQHRGAS--RRPGARALLRE 286 L GAS PG ++LL++ Sbjct: 357 LVPGAGASMFNTPGMQSLLQQ 377
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 31.2 bits (69), Expect = 1.2 Identities = 37/136 (27%), Positives = 49/136 (36%) Frame = +3 Query: 6 GSTKENRGAATGVRSNRPRSRARSISPCPASRPDPFRPRRAILTLLICADEGGELLSTVM 185 G + GAAT + + +P PAS P P RP GG LL Sbjct: 250 GGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRP-------------GGGLLP--- 293 Query: 186 PPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAERVVLT 365 P +L +L+ A+ A E AS GR R + + P ALA Sbjct: 294 PGARIL--EYLEGVREANLAKTLERPEPPAGMASPPGRSPHRLPKDQRPKSALA------ 345 Query: 366 SAPAERVARPEAHPQS 413 A + A P PQ+ Sbjct: 346 GASKRKRANPRPRPQT 361
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +3 Query: 300 PSRRTVRSKAP-VGALAERVVLTSAPAERVARPEAHPQS 413 PSRR+VRS +P G+ A RV +S+P R P H +S Sbjct: 93 PSRRSVRSPSPRQGSPARRVDRSSSPRARSPPPRRHSRS 131
>MAZ_MOUSE (P56671) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) Length = 477 Score = 30.8 bits (68), Expect = 1.6 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%) Frame = -3 Query: 421 AATLCGCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGL-----PPRLAKQSPRSRP 257 AA A+ A +A A V T A A +D L + PP ++ + + P Sbjct: 90 AAAQESAAAAAAAAAAAAAVVTAPPAPAAASTVDTAALKQPPAPPPPPPAVSAPAAEAAP 149 Query: 256 PRGAAVLAEPAACKKDLPSSSI 191 P AA +A AA P+S++ Sbjct: 150 PAAAATIAAAAATAVVAPTSTV 171
>MAZ_MESAU (P56670) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (Fragment) Length = 331 Score = 30.8 bits (68), Expect = 1.6 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%) Frame = -3 Query: 421 AATLCGCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGL-----PPRLAKQSPRSRP 257 AA A+ A +A A V T A A +D L + PP ++ + + P Sbjct: 77 AAAQESAAAAAAAAAAAAAVVTAPPAPAAASTVDTAALKQPPAPPPPPPAVSAPAAEAAP 136 Query: 256 PRGAAVLAEPAACKKDLPSSSI 191 P AA +A AA P+S++ Sbjct: 137 PAAAATIAAAAATAVVAPTSTV 158
>SYR_PSEPK (Q88CU1) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 578 Score = 30.8 bits (68), Expect = 1.6 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Frame = -3 Query: 313 VLLEGLPPRLAKQSPRSRPPRG-----AAVLAEPAACK-KDLPSSSIGGMTVERSSPPSS 152 VL EGL P + ++ R + A +LA+PA K +DL I + P+S Sbjct: 21 VLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINAL-------PAS 73 Query: 151 AQISKVKIARRG 116 A ISKV+IA G Sbjct: 74 ADISKVEIAGPG 85
>MEFV_HUMAN (O15553) Pyrin (Marenostrin)| Length = 781 Score = 30.8 bits (68), Expect = 1.6 Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 8/137 (5%) Frame = +3 Query: 9 STKEN----RGAATGVRSNRPRSRARSISPCPASRPDPFRPRRAILTLLICAD-EGGELL 173 ST+EN A++ + N+PRS P P RP L C+ E G L Sbjct: 95 STQENGTDDSAASSSLGENKPRSLKTPDHPEGNEGNGP-RPYGGGAASLRCSQPEAGRGL 153 Query: 174 STV-MPPMELLGRSFLQAAGSASTAAPR--GGRERGLCFASLGGRPSRRTVRSKAPVGAL 344 S + L A G T +P GGR G C A GG+ R R+ + G L Sbjct: 154 SRKPLSKRREKASEGLDAQGKPRTRSPALPGGRSPGPCRALEGGQAEVRLRRNASSAGRL 213 Query: 345 AERVVLTSAPAERVARP 395 + + AP ++ RP Sbjct: 214 --QGLAGGAPGQKECRP 228
>THIE_YERPE (Q8ZAQ1) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 215 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -3 Query: 292 PRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVER 170 P KQ P S P+G A L+ D P+ +IGG+++ER Sbjct: 133 PTQTKQMPSS--PQGLASLSRQVKNTPDYPTVAIGGISIER 171
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.0 bits (66), Expect = 2.8 Identities = 37/136 (27%), Positives = 49/136 (36%) Frame = +3 Query: 6 GSTKENRGAATGVRSNRPRSRARSISPCPASRPDPFRPRRAILTLLICADEGGELLSTVM 185 G + GAAT + + +P PAS P P RP GG LL Sbjct: 250 GGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRP-------------GGGLLP--- 293 Query: 186 PPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAERVVLT 365 P +L +L+ A+ A E AS GR R + + P ALA Sbjct: 294 PGARIL--EYLEGVREANLAKTLERPEPPAGMASPPGRSPHRLPKDQRPKSALA------ 345 Query: 366 SAPAERVARPEAHPQS 413 A + A P PQ+ Sbjct: 346 GASKRKRANPRPIPQT 361
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.0 bits (66), Expect = 2.8 Identities = 37/136 (27%), Positives = 49/136 (36%) Frame = +3 Query: 6 GSTKENRGAATGVRSNRPRSRARSISPCPASRPDPFRPRRAILTLLICADEGGELLSTVM 185 G + GAAT + + +P PAS P P RP GG LL Sbjct: 250 GGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRP-------------GGGLLP--- 293 Query: 186 PPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAERVVLT 365 P +L +L+ A+ A E AS GR R + + P ALA Sbjct: 294 PGARIL--EYLEGVREANLAKTLERPEPPAGMASPPGRSPHRLPKDQRPKSALA------ 345 Query: 366 SAPAERVARPEAHPQS 413 A + A P PQ+ Sbjct: 346 GASKRKRANPRPIPQT 361
>SPHK2_HUMAN (Q9NRA0) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (SPK 2)| Length = 654 Score = 30.0 bits (66), Expect = 2.8 Identities = 26/85 (30%), Positives = 35/85 (41%) Frame = -3 Query: 346 ARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVERS 167 AR P AL T+ + L + + P +RP G LAE + C T+ Sbjct: 60 ARGPRFAL--TLTSQALHIQRLRPKPEARPRGGLVPLAEVSGC-----------CTLRSR 106 Query: 166 SPPSSAQISKVKIARRGRNGSGRLA 92 SP SA + RGR G+ R A Sbjct: 107 SPSDSAAYFCIYTYPRGRRGARRRA 131
>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1371 Score = 29.6 bits (65), Expect = 3.6 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Frame = -3 Query: 310 LLEGLPPRLAKQSPRSRPPRGAAVLAE---------PAACKKDLPSSSIGGMTVERSSPP 158 L+ GL LA SPRS PP A + + LP + G + S Sbjct: 935 LMSGLGTGLAAASPRSSPPPLPAKASRQLQVYRSKMDSDAASPLPRTRSGPLPSSSGSSS 994 Query: 157 SSAQISKVKIARRGRNGSGRLAGQGDMLLALDL 59 SS+Q+S + R S LA G L +L Sbjct: 995 SSSQLSVATLGRSPSPKSALLAQNGTSSLPRNL 1027
>MAZ_HUMAN (P56270) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (ZF87) (ZIF87) Length = 477 Score = 29.6 bits (65), Expect = 3.6 Identities = 24/97 (24%), Positives = 39/97 (40%) Frame = -3 Query: 421 AATLCGCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAA 242 +A A+ A A A ++ T AL + PP ++ + + PP AA Sbjct: 95 SAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAA 154 Query: 241 VLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISKVK 131 +A AA P+S++ +P +SA K K Sbjct: 155 TIAAAAATAVVAPTSTVA------VAPVASALEKKTK 185
>H1C2_XENLA (P15867) Histone H1C (Clone XLHW8)| Length = 220 Score = 29.6 bits (65), Expect = 3.6 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = -3 Query: 247 AAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQGDMLLA 68 AA AEP KK P + GG ++ S PS++++ ++ G LA L A Sbjct: 11 AAPPAEPKQKKKQQPKKAAGGAKAKKPSGPSASELIVKSVSASKERGGVSLAALKKALAA 70
>THIE_SALTY (Q9L9I8) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 211 Score = 29.6 bits (65), Expect = 3.6 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%) Frame = -3 Query: 292 PRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVER------SSPPSSAQISKVK 131 P KQ P + P+G A LA D P+ +IGG+++ER + S A +S + Sbjct: 133 PTQTKQMPSA--PQGLAQLASHIERLADYPTVAIGGISLERAPAVLATGVGSIAVVSAIT 190 Query: 130 IARRGRNGSGRL---AGQGD 80 A R + L AG GD Sbjct: 191 QAADWREATAELLAIAGVGD 210
>TCP10_HUMAN (Q12799) T-complex protein 10A homolog| Length = 416 Score = 29.6 bits (65), Expect = 3.6 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Frame = +3 Query: 45 RSNRPRSRARSISPCPASRPDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRSFLQA 224 R P R + SP P RP P RR + +++G + + P GR Sbjct: 186 REKSPPGRRQDRSPAPTGRPTPGAERRGV------SEDGKIMHPSSRSPQNSGGRKSPVQ 239 Query: 225 AGSAS-----TAAPRGG-RERGLCFASLGGRPSR 308 A A+ TAA RG R + +S GG SR Sbjct: 240 ASQATTLQEQTAAARGADRSSSVLGSSEGGFLSR 273
>PHYK2_ORYSA (Q5N9J9) Probable phytol kinase 2, chloroplast precursor (EC| 2.7.-.-) (Fragment) Length = 296 Score = 29.6 bits (65), Expect = 3.6 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -3 Query: 307 LEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKDLP 203 L LP + P+SRPP A A+C DLP Sbjct: 1 LLSLPSSAPRSRPQSRPPLSPPAAAAAASCSFDLP 35
>RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 609 Score = 29.3 bits (64), Expect = 4.7 Identities = 24/82 (29%), Positives = 34/82 (41%) Frame = +3 Query: 81 SPCPASRPDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRSFLQAAGSASTAAPRGG 260 +P PAS P P +P+ +S PP G S L GS P G Sbjct: 129 APAPASAPPPSKPQN---------------ISAPPPPSMNRGASKLFGGGSV-VNTPGGS 172 Query: 261 RERGLCFASLGGRPSRRTVRSK 326 + + + ASL S+ TVR++ Sbjct: 173 QSKVVPIASLNPYQSKWTVRAR 194
>GTSE1_HUMAN (Q9NYZ3) G2 and S phase expressed protein 1 (B99 homolog)| Length = 720 Score = 29.3 bits (64), Expect = 4.7 Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 34/151 (22%) Frame = -3 Query: 379 SAGAEVRTTRSARA----PTGALDRTVLLEGLPPRLAKQSPR--------------SRPP 254 S+G ++ SAR PT A R GLPP K PR S P Sbjct: 494 SSGPAPQSLLSARRVSALPTPASRRC---SGLPPMTPKTMPRAVGSPLCVPARRRSSEPR 550 Query: 253 RGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSS----------------AQISKVKIAR 122 + +A+ EP S + ++ +R SPPS ++ + ++AR Sbjct: 551 KNSAMRTEPTRESNRKTDSRLVDVSPDRGSPPSRVPQALNFSPEESDSTFSKSTATEVAR 610 Query: 121 RGRNGSGRLAGQGDMLLALDLGRLDRTPVAA 29 G A +L+ + L L TP AA Sbjct: 611 EEAKPGGDAAPSEALLVDIKLEPLAVTPDAA 641
>THIE_SALTI (Q8Z325) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 211 Score = 29.3 bits (64), Expect = 4.7 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%) Frame = -3 Query: 292 PRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVER------SSPPSSAQISKVK 131 P KQ P + P+G A LA D P+ +IGG+++ER + S A +S + Sbjct: 133 PTQTKQMPSA--PQGLAQLARHIERLADYPTVAIGGISLERAPAVLATGVGSIAVVSAIT 190 Query: 130 IARRGRNGSGRL---AGQGD 80 A R + +L AG GD Sbjct: 191 QAADWRAATAQLLAIAGVGD 210
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 28.9 bits (63), Expect = 6.2 Identities = 42/139 (30%), Positives = 52/139 (37%), Gaps = 5/139 (3%) Frame = +3 Query: 6 GSTKENRGAA--TGVRSNRPRS---RARSISPCPASRPDPFRPRRAILTLLICADEGGEL 170 GS +RG + TGVR PR RAR+ P ++ P RR+ D G E Sbjct: 208 GSPVAHRGTSLGTGVRDPAPRGGRGRARTPGPVHSAAGGPGSRRRSPGA---ARDPGPE- 263 Query: 171 LSTVMPPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAE 350 P E G GS A G R+ G A + RP RR S G Sbjct: 264 ------PGEERGGGGKPPLGSPR--ATDGNRDPG---AGVPARPGRRMGGSSGGRGGTPG 312 Query: 351 RVVLTSAPAERVARPEAHP 407 R +AP R P+ P Sbjct: 313 RGPERAAPGARPTAPDGAP 331
>UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15)| (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36) Length = 1121 Score = 28.9 bits (63), Expect = 6.2 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = +3 Query: 42 VRSNRPRSRARSISPCPASR---PDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRS 212 V S P RAR++SP P S PF P +L+ ST PP G S Sbjct: 729 VASTWPVHRARAVSPAPQSSSRLQPPFSPHPTLLS------------STPKPP----GTS 772 Query: 213 FLQAAGSASTAAPR 254 ++ S STA P+ Sbjct: 773 EPRSCSSISTALPQ 786
>SEM6A_HUMAN (Q9H2E6) Semaphorin-6A precursor (Semaphorin VIA) (Sema VIA)| (Semaphorin 6A-1) (SEMA6A-1) Length = 1030 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -3 Query: 349 SARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVER 170 S+++P ++ L+ LPP++ ++ PP GA++ + + ++ SS G+ +R Sbjct: 860 SSKSPNHGVNLVENLDSLPPKVPQREASLGPP-GASLSQTGLSKRLEMHHSSSYGVDYKR 918 Query: 169 SSPPSS 152 S P +S Sbjct: 919 SYPTNS 924
>TRIO_HUMAN (O75962) Triple functional domain protein (PTPRF-interacting protein)| Length = 3038 Score = 28.9 bits (63), Expect = 6.2 Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Frame = -3 Query: 265 SRPPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQ 86 S PP GAA A P+A + P + G ER + P I K+K+ R G+ +G Sbjct: 2316 SLPPPGAAPEAGPSAPSRRPPGADAEGS--EREAEP----IPKMKVLESPRKGAANASGS 2369 Query: 85 GDMLLALD----LGRL----DRTPVAAPLFS 17 A D LG L R A+PL S Sbjct: 2370 SPDAPAKDARASLGTLPLGKPRAGAASPLNS 2400
>ODPA_BACST (P21873) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 368 Score = 28.9 bits (63), Expect = 6.2 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +3 Query: 180 VMPPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGG 296 V+PP ++G ++QAAG A RG + + + GG Sbjct: 137 VLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGG 175
>DBP_RAT (P16443) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) (D site albumin promoter-binding protein 1) Length = 325 Score = 28.9 bits (63), Expect = 6.2 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 19/93 (20%) Frame = -3 Query: 310 LLEGLPPRLAKQSPRSRPPRGAAVLA------------EPAAC-------KKDLPSSSIG 188 L + P L P PP G A+L EPA+C K LPS+ + Sbjct: 5 LSDRTPGPLLLGGPAGAPPGGGALLGLRSLLQGNSKPKEPASCLLKEKERKATLPSAPVP 64 Query: 187 GMTVERSSPPSSAQISKVKIARRGRNGSGRLAG 89 G +E ++ P+ A V R SG +AG Sbjct: 65 GPVLE-TAGPADAPTGAVSGGGSPRGRSGPVAG 96
>PSIP1_RAT (Q812D1) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) Length = 528 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +3 Query: 3 KGSTKENRGAATGVRSNRPRSRARSI-SPCPA 95 K S K R AAT V+ +PR R + + PCP+ Sbjct: 174 KASPKRGRPAATEVKIPKPRGRPKVVKQPCPS 205
>PSIP1_MOUSE (Q99JF8) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) Length = 528 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +3 Query: 3 KGSTKENRGAATGVRSNRPRSRARSI-SPCPA 95 K S K R AAT V+ +PR R + + PCP+ Sbjct: 174 KASPKRGRPAATEVKIPKPRGRPKVVKQPCPS 205
>LPRE_MYCTU (P65312) Putative lipoprotein lprE precursor| Length = 202 Score = 28.5 bits (62), Expect = 8.1 Identities = 27/97 (27%), Positives = 38/97 (39%) Frame = -3 Query: 436 VTTASAATLCGCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRP 257 V AATL GC SG +T++ E + S P E PP + + P Sbjct: 18 VAALVAATLTGCGSGDSTVAKTPEATPSLSTAHPAPPSS-----EPSPP----SATAAPP 68 Query: 256 PRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQ 146 +A +P C +L S +I + E P S Q Sbjct: 69 SNHSAAPVDP--CAVNLASPTIAKVVSELPRDPRSEQ 103
>LPRE_MYCBO (P65313) Putative lipoprotein lprE precursor| Length = 202 Score = 28.5 bits (62), Expect = 8.1 Identities = 27/97 (27%), Positives = 38/97 (39%) Frame = -3 Query: 436 VTTASAATLCGCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRP 257 V AATL GC SG +T++ E + S P E PP + + P Sbjct: 18 VAALVAATLTGCGSGDSTVAKTPEATPSLSTAHPAPPSS-----EPSPP----SATAAPP 68 Query: 256 PRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQ 146 +A +P C +L S +I + E P S Q Sbjct: 69 SNHSAAPVDP--CAVNLASPTIAKVVSELPRDPRSEQ 103
>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 521 Score = 28.5 bits (62), Expect = 8.1 Identities = 23/70 (32%), Positives = 28/70 (40%) Frame = -3 Query: 406 GCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEP 227 G G A L A AE++ + A A L P A + P RP AAV EP Sbjct: 156 GTCGGDALLFAPAELKMGTAFSAGAEAARGPGTGPPLSPAAALRPPGKRPAPPAAVATEP 215 Query: 226 AACKKDLPSS 197 A PS+ Sbjct: 216 PAKAAKAPSA 225
>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)| Length = 1412 Score = 28.5 bits (62), Expect = 8.1 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 14/109 (12%) Frame = -3 Query: 433 TTASAATLCGCASGRATLSA------GAEVRTTRSARAPTGALDRTVLLE--------GL 296 +++S++T C+S A+ T+ A + +G+ T LLE Sbjct: 1273 SSSSSSTSSNCSSSSASSCQYFQSPHSTSNGTSAPASSSSGSNSATPLLELQVDIADSAQ 1332 Query: 295 PPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSA 149 P L+K+SP P + A++A A ++ S+ +T PPS+A Sbjct: 1333 PLNLSKKSPTPPPSKLHALVAAANAVQRYPTLSADVTVTASNGGPPSAA 1381
>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) Length = 769 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/47 (31%), Positives = 20/47 (42%) Frame = +3 Query: 27 GAATGVRSNRPRSRARSISPCPASRPDPFRPRRAILTLLICADEGGE 167 G A + R + P P R RPR +L LL+ D GG+ Sbjct: 18 GPAAPAATGRAALPSAGCCPLPPGRNSSSRPRLLLLLLLLLQDAGGQ 64
>PRGR_RABIT (P06186) Progesterone receptor (PR)| Length = 930 Score = 28.5 bits (62), Expect = 8.1 Identities = 26/72 (36%), Positives = 31/72 (43%) Frame = -3 Query: 388 ATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKD 209 A +A RT A A A L PP L + P SRP AAV A P + Sbjct: 392 AAEAAARSPRTYLVAGANPAAFPDFQLAAPPPPSLPPRVPSSRPGE-AAVAASPGSA--S 448 Query: 208 LPSSSIGGMTVE 173 + SSS G T+E Sbjct: 449 VSSSSSSGSTLE 460
>PER_DROSC (P91705) Period circadian protein (Fragment)| Length = 375 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -3 Query: 214 KDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQGDM 77 K L + + GGM SSA +SK + + G GSG + G G++ Sbjct: 194 KQLLTLNTGGMPPLLDIHTSSASLSKCQASGAGGGGSGSVGGTGNI 239
>PER_DROCP (P91607) Period circadian protein (Fragment)| Length = 375 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -3 Query: 214 KDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQGDM 77 K L + + GGM SSA +SK + + G GSG + G G++ Sbjct: 194 KQLLTLNTGGMPPLLDIHTSSASLSKCQASGAGGGGSGSVGGTGNI 239
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = +3 Query: 27 GAATGVRSNRPRSRARSISPCPASRPDPFRP 119 G GV N PRS + S P PAS P RP Sbjct: 825 GLGGGVVENGPRSLSSSPRPRPASHSPPTRP 855
>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)| (Zona occludens 2 protein) (Tight junction protein 2) Length = 1190 Score = 28.5 bits (62), Expect = 8.1 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Frame = +3 Query: 9 STKENRGAATGVRSNRPRSR------ARSISPCPASRPDP 110 S + RGA RS PRSR +RS SP P RP P Sbjct: 266 SPEYRRGARHDARSRGPRSRSREHPHSRSPSPEPRGRPGP 305
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 28.5 bits (62), Expect = 8.1 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = -3 Query: 277 QSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISK 137 + P+ P V + A K D+PSS + E+++PP +K Sbjct: 701 KQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAK 747
>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)| Length = 1199 Score = 28.5 bits (62), Expect = 8.1 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 14/109 (12%) Frame = -3 Query: 433 TTASAATLCGCASGRATLSA------GAEVRTTRSARAPTGALDRTVLLE--------GL 296 +++S++T C+S A+ T+ A + +G+ T LLE Sbjct: 1060 SSSSSSTSSNCSSSSASSCQYFQSPHSTSNGTSAPASSSSGSNSATPLLELQVDIADSAQ 1119 Query: 295 PPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSA 149 P L+K+SP P + A++A A ++ S+ +T PPS+A Sbjct: 1120 PLNLSKKSPTPPPSKLHALVAAANAVQRYPTLSADVTVTASNGGPPSAA 1168
>YNE1_CAEEL (P30640) Hypothetical protein R08D7.1| Length = 458 Score = 28.5 bits (62), Expect = 8.1 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 11/73 (15%) Frame = -3 Query: 295 PPRLAKQSPRSR-------PPRGAAVLAEPAACKKDLPSS--SIGGMTVE--RSSPPSSA 149 PPR SP R PPR + + EP KK+ P S G T+E RS S+ Sbjct: 207 PPRRRPSSPARRRKDDDLSPPRKSRKIEEPKKIKKEEPDSDTETSGRTLEGKRSGLQSAR 266 Query: 148 QISKVKIARRGRN 110 + + R +N Sbjct: 267 DLKEESDKLRAKN 279
>UL49_HHV11 (P10233) Tegument protein UL49| Length = 301 Score = 28.5 bits (62), Expect = 8.1 Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 1/124 (0%) Frame = +3 Query: 6 GSTKENRGAATGVRSNRPRSRARSISPCPASRPDPFRPRRAILTLLICADEGGELLSTVM 185 GS+ E+ R+ RP S A P PA P P G T Sbjct: 70 GSSSEDDEHPEVPRTRRPVSGAVLSGPGPARAPPP-----------PAGSGGAGRTPTTA 118 Query: 186 PPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRP-SRRTVRSKAPVGALAERVVL 362 P R +A + + RG + A+L P S RSK P LA ++ Sbjct: 119 PRAPRTQRVATKAPAAPAAETTRGRKSAQPESAALPDAPASTAPTRSKTPAQGLARKLHF 178 Query: 363 TSAP 374 ++AP Sbjct: 179 STAP 182
>E75BA_DROME (P17672) Ecdysone-induced protein 75B isoform A (E75-B)| Length = 1355 Score = 28.5 bits (62), Expect = 8.1 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 14/109 (12%) Frame = -3 Query: 433 TTASAATLCGCASGRATLSA------GAEVRTTRSARAPTGALDRTVLLE--------GL 296 +++S++T C+S A+ T+ A + +G+ T LLE Sbjct: 1216 SSSSSSTSSNCSSSSASSCQYFQSPHSTSNGTSAPASSSSGSNSATPLLELQVDIADSAQ 1275 Query: 295 PPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSA 149 P L+K+SP P + A++A A ++ S+ +T PPS+A Sbjct: 1276 PLNLSKKSPTPPPSKLHALVAAANAVQRYPTLSADVTVTASNGGPPSAA 1324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,223,463 Number of Sequences: 219361 Number of extensions: 957445 Number of successful extensions: 4804 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 4510 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4788 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)