>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
 Frame = +3

Query: 90  PQLKQERHSRGYRGGEENSPPRNLSVP-----QNPPKT*SPSPERSSFSWFPLATDKQS 251
           P      H +   GG   SPP   S       Q PP T  P P+R    W P +  K S
Sbjct: 166 PSTSSHHHHQDPPGGGPPSPPPRPSTSSSSSHQGPPSTRPPPPQRPPPRWPPPSPQKIS 224

>SYJ1_SCHPO (O43001) Synaptojanin homolog 1 (EC 3.1.3.36)|
            (Inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1076

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +3

Query: 147  PPRNLSVPQNPPKT*SPSPERSSFSWFPL 233
            PPR  S  Q      + SPE SS SW PL
Sbjct: 1047 PPRKSSASQRSGDLLASSPEESSISWKPL 1075

>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 121 GTEEERRIHLPVTSPSPKIL-RKPNLRPR 204
           G++EE R+  P  SPS K   RKP  RPR
Sbjct: 152 GSDEEVRVRSPTRSPSVKTSPRKPRGRPR 180

>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)|
          Length = 3866

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 121 GTEEERRIHLPVTSPSPKIL-RKPNLRPR 204
           G++EE R+  P  SPS K   RKP  RPR
Sbjct: 50  GSDEEVRVRSPTRSPSVKASPRKPRGRPR 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,735,090
Number of Sequences: 219361
Number of extensions: 817218
Number of successful extensions: 2534
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2532
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)