ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472477.1| Oryza sativa (japonica cultivar-group), predic... 151 2e-33
2emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4,... 151 2e-33
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
4dbj|AK066958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
5ref|XM_959828.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.072
6ref|XM_331495.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.072
7gb|AY487947.1| Human adenovirus E, complete genome 44 0.28
8gb|AY530878.1| Simian adenovirus 24 strain ATCC VR-593, complete... 44 0.28
9gb|AY530877.1| Simian adenovirus 23 strain ATCC VR-592, complete... 44 0.28
10gb|AY599837.1| Human adenovirus type 4 strain NHRC 3, complete g... 44 0.28
11gb|AY599835.1| Human adenovirus type 4 strain NHRC 42606, comple... 44 0.28
12gb|AY594254.1| Human adenovirus type 4 vaccine strain, complete ... 44 0.28
13ref|NM_057364.3| Drosophila melanogaster Ran GTPase activating p... 44 0.28
14gb|AY458656.1| Human adenovirus type 4 strain CL68578, complete ... 44 0.28
15gb|AF394196.1|AF394196 Simian adenovirus 25, complete genome 44 0.28
16gb|AY061219.1| Drosophila melanogaster LD16356 full length cDNA 44 0.28
17gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37... 44 0.28
18gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, r... 44 0.28
19gb|AF143860.1|AF143860 Drosophila melanogaster RanGAP (Sd+) mRNA... 44 0.28
20gb|AE003663.4| Drosophila melanogaster chromosome 2L, section 72... 44 0.28
21gb|AY594253.1| Human adenovirus type 4 strain RI-67, complete ge... 44 0.28
22gb|AC005428.1|AC005428 Drosophila melanogaster DNA sequence (P1 ... 44 0.28
23gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.1
24ref|XM_750597.1| Aspergillus fumigatus Af293 ribosome biogenesis... 42 1.1
25emb|AL162586.26| Human DNA sequence from clone RP11-228B15 on ch... 42 1.1
26emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 42 1.1
27gb|AF517840.1| Homo sapiens cyclin-dependent kinase 9 (CDC2-rela... 42 1.1
28gb|U16240.1|BTBBINH1 Bos taurus betaB inhibin/activin precursor,... 42 1.1
29ref|NM_002193.1| Homo sapiens inhibin, beta B (activin AB beta p... 42 1.1
30gb|AC012363.6| Homo sapiens BAC clone RP11-438O12 from 2, comple... 42 1.1
31gb|AF255306.1|AF255306 Homo sapiens protein kinase CDK9 (CDK9) g... 42 1.1
32gb|M31668.1|HUMINHBB1 Human inhibin beta-B-subunit gene, exon 1 42 1.1
33gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.1
34dbj|AB078604.1| Phanerochaete sordida mnp1 gene for manganese pe... 42 1.1
35ref|NM_111877.2| Arabidopsis thaliana ATP binding / nucleoside-t... 40 4.4
36ref|NM_180222.1| Arabidopsis thaliana ATP binding / nucleoside-t... 40 4.4
37ref|XM_463007.1| Oryza sativa (japonica cultivar-group), OSJNBa0... 40 4.4
38ref|XM_369831.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.4
39ref|XM_655628.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 4.4
40gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.4
41ref|XM_747250.1| Aspergillus fumigatus Af293 hypothetical protei... 40 4.4
42ref|XM_386837.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 4.4
43gb|AF531959.1| Drosophila yakuba CG4456 mRNA, partial cds 40 4.4
44ref|XM_967502.1| PREDICTED: Tribolium castaneum similar to CG484... 40 4.4
45ref|XM_777360.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.4
46ref|NM_169423.2| Drosophila melanogaster Lk6 CG17342-RB, transcr... 40 4.4
47ref|NM_143729.2| Drosophila melanogaster Lk6 CG17342-RA, transcr... 40 4.4
48gb|AY056103.1| Arabidopsis thaliana AT3g10420/F13M14_30 mRNA, co... 40 4.4
49gb|U76378.1|DMU76378 Drosophila melanogaster LK6 protein kinase ... 40 4.4
50gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genom... 40 4.4
51dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
53emb|BX823284.1|CNS0A4R7 Arabidopsis thaliana Full-length cDNA Co... 40 4.4
54gb|AC007805.5|AC007805 Drosophila melanogaster, chromosome 3R, r... 40 4.4
55gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
56gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13... 40 4.4
57dbj|AK108842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
58dbj|AK068853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
59gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ... 40 4.4
60gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31... 40 4.4
61gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
62emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.4
63gb|M29328.1|AGMRSSPC3 African green monkey small polydisperse ci... 40 4.4 
>ref|XM_472477.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3354

 Score =  151 bits (76), Expect = 2e-33
 Identities = 130/148 (87%)
 Strand = Plus / Plus

                                                                       
Query: 44  gagcgacagcgatgtcgacgaggacgagctcctccagatggcgctacaggagcaggccgc 103
           |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 6   gagcgacagcgacgtcgacgaggacgagctcctccagatggcgctgcaggagcaggcggc 65

                                                                       
Query: 104 ccgggacctcagccaccagcgcccggccggcgcgaacaagcccgtcgtcaacctcgtccg 163
            || |||||||||||||||||||| || || ||    |||||||||||||||||||||||
Sbjct: 66  gcgtgacctcagccaccagcgccccgcgggggccgggaagcccgtcgtcaacctcgtccg 125

                                       
Query: 164 cccgcccgcgccctcctcccgtggcggc 191
           ||| || ||   ||||||||| ||||||
Sbjct: 126 cccccctgccaactcctcccgcggcggc 153



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 236 cgacgaggacgacgactccgatgtcgagatgctctccatttcctccggcgacgaggacgg 295
           |||||| |||||||||||||| ||||||||||| |||||||||||||| || ||||| ||
Sbjct: 219 cgacgacgacgacgactccgaggtcgagatgctgtccatttcctccggggatgaggatgg 278

                  
Query: 296 agccccc 302
            ||||||
Sbjct: 279 cgccccc 285
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>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23,
              complete sequence
          Length = 148736

 Score =  151 bits (76), Expect = 2e-33
 Identities = 130/148 (87%)
 Strand = Plus / Plus

                                                                          
Query: 44     gagcgacagcgatgtcgacgaggacgagctcctccagatggcgctacaggagcaggccgc 103
              |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 118317 gagcgacagcgacgtcgacgaggacgagctcctccagatggcgctgcaggagcaggcggc 118376

                                                                          
Query: 104    ccgggacctcagccaccagcgcccggccggcgcgaacaagcccgtcgtcaacctcgtccg 163
               || |||||||||||||||||||| || || ||    |||||||||||||||||||||||
Sbjct: 118377 gcgtgacctcagccaccagcgccccgcgggggccgggaagcccgtcgtcaacctcgtccg 118436

                                          
Query: 164    cccgcccgcgccctcctcccgtggcggc 191
              ||| || ||   ||||||||| ||||||
Sbjct: 118437 cccccctgccaactcctcccgcggcggc 118464



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                          
Query: 236    cgacgaggacgacgactccgatgtcgagatgctctccatttcctccggcgacgaggacgg 295
              |||||| |||||||||||||| ||||||||||| |||||||||||||| || ||||| ||
Sbjct: 118530 cgacgacgacgacgactccgaggtcgagatgctgtccatttcctccggggatgaggatgg 118589

                     
Query: 296    agccccc 302
               ||||||
Sbjct: 118590 cgccccc 118596
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  151 bits (76), Expect = 2e-33
 Identities = 130/148 (87%)
 Strand = Plus / Plus

                                                                            
Query: 44       gagcgacagcgatgtcgacgaggacgagctcctccagatggcgctacaggagcaggccgc 103
                |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 20871492 gagcgacagcgacgtcgacgaggacgagctcctccagatggcgctgcaggagcaggcggc 20871551

                                                                            
Query: 104      ccgggacctcagccaccagcgcccggccggcgcgaacaagcccgtcgtcaacctcgtccg 163
                 || |||||||||||||||||||| || || ||    |||||||||||||||||||||||
Sbjct: 20871552 gcgtgacctcagccaccagcgccccgcgggggccgggaagcccgtcgtcaacctcgtccg 20871611

                                            
Query: 164      cccgcccgcgccctcctcccgtggcggc 191
                ||| || ||   ||||||||| ||||||
Sbjct: 20871612 cccccctgccaactcctcccgcggcggc 20871639



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 236      cgacgaggacgacgactccgatgtcgagatgctctccatttcctccggcgacgaggacgg 295
                |||||| |||||||||||||| ||||||||||| |||||||||||||| || ||||| ||
Sbjct: 20871705 cgacgacgacgacgactccgaggtcgagatgctgtccatttcctccggggatgaggatgg 20871764

                       
Query: 296      agccccc 302
                 ||||||
Sbjct: 20871765 cgccccc 20871771
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>dbj|AK066958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F17, full
           insert sequence
          Length = 3847

 Score =  151 bits (76), Expect = 2e-33
 Identities = 130/148 (87%)
 Strand = Plus / Plus

                                                                       
Query: 44  gagcgacagcgatgtcgacgaggacgagctcctccagatggcgctacaggagcaggccgc 103
           |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 111 gagcgacagcgacgtcgacgaggacgagctcctccagatggcgctgcaggagcaggcggc 170

                                                                       
Query: 104 ccgggacctcagccaccagcgcccggccggcgcgaacaagcccgtcgtcaacctcgtccg 163
            || |||||||||||||||||||| || || ||    |||||||||||||||||||||||
Sbjct: 171 gcgtgacctcagccaccagcgccccgcgggggccgggaagcccgtcgtcaacctcgtccg 230

                                       
Query: 164 cccgcccgcgccctcctcccgtggcggc 191
           ||| || ||   ||||||||| ||||||
Sbjct: 231 cccccctgccaactcctcccgcggcggc 258



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 236 cgacgaggacgacgactccgatgtcgagatgctctccatttcctccggcgacgaggacgg 295
           |||||| |||||||||||||| ||||||||||| |||||||||||||| || ||||| ||
Sbjct: 324 cgacgacgacgacgactccgaggtcgagatgctgtccatttcctccggggatgaggatgg 383

                  
Query: 296 agccccc 302
            ||||||
Sbjct: 384 cgccccc 390
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>ref|XM_959828.1| Neurospora crassa OR74A hypothetical protein (NCU09104.1) partial
           mRNA
          Length = 6903

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 230 cgagggcgacgaggacgacgactccga 256
           ||||| |||||||||||||||||||||
Sbjct: 324 cgaggacgacgaggacgacgactccga 350
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>ref|XM_331495.1| Neurospora crassa OR74A hypothetical protein (NCU09104.1) partial
           mRNA
          Length = 6903

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 230 cgagggcgacgaggacgacgactccga 256
           ||||| |||||||||||||||||||||
Sbjct: 324 cgaggacgacgaggacgacgactccga 350
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>gb|AY487947.1| Human adenovirus E, complete genome
          Length = 35994

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15218 cctcgtccgcccgcccgcgccc 15239
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>gb|AY530878.1| Simian adenovirus 24 strain ATCC VR-593, complete genome
          Length = 36535

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15265 cctcgtccgcccgcccgcgccc 15286
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>gb|AY530877.1| Simian adenovirus 23 strain ATCC VR-592, complete genome
          Length = 36604

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15263 cctcgtccgcccgcccgcgccc 15284
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>gb|AY599837.1| Human adenovirus type 4 strain NHRC 3, complete genome
          Length = 35964

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15164 cctcgtccgcccgcccgcgccc 15185
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>gb|AY599835.1| Human adenovirus type 4 strain NHRC 42606, complete genome
          Length = 35965

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15165 cctcgtccgcccgcccgcgccc 15186
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>gb|AY594254.1| Human adenovirus type 4 vaccine strain, complete genome
          Length = 35994

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15218 cctcgtccgcccgcccgcgccc 15239
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>ref|NM_057364.3| Drosophila melanogaster Ran GTPase activating protein CG9999-RA
            (RanGap), mRNA
          Length = 2324

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 229  gcgagggcgacgaggacgacga 250
            ||||||||||||||||||||||
Sbjct: 1633 gcgagggcgacgaggacgacga 1654
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>gb|AY458656.1| Human adenovirus type 4 strain CL68578, complete genome
          Length = 36015

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15229 cctcgtccgcccgcccgcgccc 15250
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>gb|AF394196.1|AF394196 Simian adenovirus 25, complete genome
          Length = 36521

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15288 cctcgtccgcccgcccgcgccc 15309
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>gb|AY061219.1| Drosophila melanogaster LD16356 full length cDNA
          Length = 2012

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 229  gcgagggcgacgaggacgacga 250
            ||||||||||||||||||||||
Sbjct: 1307 gcgagggcgacgaggacgacga 1328
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>gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37D-37E, BAC clone
             BACR27M12, complete sequence
          Length = 157766

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 229   gcgagggcgacgaggacgacga 250
             ||||||||||||||||||||||
Sbjct: 33457 gcgagggcgacgaggacgacga 33478
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>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24,
              complete sequence
          Length = 171375

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 229    gcgagggcgacgaggacgacga 250
              ||||||||||||||||||||||
Sbjct: 139649 gcgagggcgacgaggacgacga 139670
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>gb|AF143860.1|AF143860 Drosophila melanogaster RanGAP (Sd+) mRNA, complete cds
          Length = 2319

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 229  gcgagggcgacgaggacgacga 250
            ||||||||||||||||||||||
Sbjct: 1633 gcgagggcgacgaggacgacga 1654
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>gb|AE003663.4| Drosophila melanogaster chromosome 2L, section 72 of 83 of the
            complete sequence
          Length = 290667

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 229  gcgagggcgacgaggacgacga 250
            ||||||||||||||||||||||
Sbjct: 5076 gcgagggcgacgaggacgacga 5097
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>gb|AY594253.1| Human adenovirus type 4 strain RI-67, complete genome
          Length = 35990

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   cctcgtccgcccgcccgcgccc 176
             ||||||||||||||||||||||
Sbjct: 15218 cctcgtccgcccgcccgcgccc 15239
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>gb|AC005428.1|AC005428 Drosophila melanogaster DNA sequence (P1 DS05231 (D342)), complete
             sequence
          Length = 87835

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 229   gcgagggcgacgaggacgacga 250
             ||||||||||||||||||||||
Sbjct: 82838 gcgagggcgacgaggacgacga 82817
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 230     cgagggcgacgaggacgacga 250
               |||||||||||||||||||||
Sbjct: 2126154 cgagggcgacgaggacgacga 2126174
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>ref|XM_750597.1| Aspergillus fumigatus Af293 ribosome biogenesis protein Bms1
            (Afu2g13570) partial mRNA
          Length = 3549

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 51   agcgatgtcgacgaggacgag 71
            |||||||||||||||||||||
Sbjct: 1537 agcgatgtcgacgaggacgag 1557
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>emb|AL162586.26| Human DNA sequence from clone RP11-228B15 on chromosome 9 Contains the
             5' end of the SH2D3C gene for SH2 domain containing 3C
             (CHAT,NSP3), the CDK9 gene for cyclin-dependent kinase 9
             (CDC2-related kinase) (TAK, C-2k, CDC2L4, PITALRE), the
             FPGS gene for folylpolyglutamate synthase
             (folylpolyglutamate synthetase), the 3' end fo the ENG
             gene for endoglin (Osler-Rendu-Weber syndrome 1)(END, ORW,
             HHT1, ORW1, CD105), a novel gene and five CpG islands,
             complete sequence
          Length = 80642

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 155   cctcgtccgcccgcccgcgccctcctccc 183
             |||| ||||||||||| ||||||||||||
Sbjct: 37484 cctcctccgcccgcccccgccctcctccc 37456
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 230    cgagggcgacgaggacgacga 250
              |||||||||||||||||||||
Sbjct: 235778 cgagggcgacgaggacgacga 235798
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>gb|AF517840.1| Homo sapiens cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9)
            gene, complete cds
          Length = 6333

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 155  cctcgtccgcccgcccgcgccctcctccc 183
            |||| ||||||||||| ||||||||||||
Sbjct: 1101 cctcctccgcccgcccccgccctcctccc 1073
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>gb|U16240.1|BTBBINH1 Bos taurus betaB inhibin/activin precursor, gene, exon 1
          Length = 2489

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 307  gcgagcgcggggccccgccgc 327
            |||||||||||||||||||||
Sbjct: 1401 gcgagcgcggggccccgccgc 1421
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>ref|NM_002193.1| Homo sapiens inhibin, beta B (activin AB beta polypeptide) (INHBB),
           mRNA
          Length = 3516

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 307 gcgagcgcggggccccgccgc 327
           |||||||||||||||||||||
Sbjct: 221 gcgagcgcggggccccgccgc 241
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>gb|AC012363.6| Homo sapiens BAC clone RP11-438O12 from 2, complete sequence
          Length = 217346

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 307    gcgagcgcggggccccgccgc 327
              |||||||||||||||||||||
Sbjct: 190368 gcgagcgcggggccccgccgc 190388
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>gb|AF255306.1|AF255306 Homo sapiens protein kinase CDK9 (CDK9) gene, complete cds
          Length = 5572

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 155 cctcgtccgcccgcccgcgccctcctccc 183
           |||| ||||||||||| ||||||||||||
Sbjct: 997 cctcctccgcccgcccccgccctcctccc 969
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>gb|M31668.1|HUMINHBB1 Human inhibin beta-B-subunit gene, exon 1
          Length = 1263

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 307 gcgagcgcggggccccgccgc 327
           |||||||||||||||||||||
Sbjct: 221 gcgagcgcggggccccgccgc 241
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 227     ccgcgagggcgacgaggacgacgac 251
               ||||||| |||||||||||||||||
Sbjct: 4385303 ccgcgagtgcgacgaggacgacgac 4385327
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>dbj|AB078604.1| Phanerochaete sordida mnp1 gene for manganese peroxidase isoform 1,
            complete cds
          Length = 3170

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 226  gccgcgagggcgacgaggacgacga 250
            |||||||||||||||||| ||||||
Sbjct: 1196 gccgcgagggcgacgagggcgacga 1172
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>ref|NM_111877.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/
           nucleotide binding AT3G10420 transcript variant
           AT3G10420.2 mRNA, complete cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 ttcctccggcgacgaggacggagc 298
           |||||||||||||||||| |||||
Sbjct: 438 ttcctccggcgacgaggaaggagc 461
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>ref|NM_180222.1| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/
           nucleotide binding AT3G10420 transcript variant
           AT3G10420.1 mRNA, complete cds
          Length = 2538

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 ttcctccggcgacgaggacggagc 298
           |||||||||||||||||| |||||
Sbjct: 438 ttcctccggcgacgaggaaggagc 461
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>ref|XM_463007.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.20 mRNA
          Length = 2597

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 53  cgatgtcgacgaggacgagctcct 76
           |||||||||||||||||| |||||
Sbjct: 142 cgatgtcgacgaggacgatctcct 119
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>ref|XM_369831.1| Magnaporthe grisea 70-15 hypothetical protein (MG06346.4) partial
            mRNA
          Length = 3138

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 41   catgagcgacagcgatgtcgacgaggac 68
            |||||||||||||||||  |||||||||
Sbjct: 2871 catgagcgacagcgatgaggacgaggac 2898
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>ref|XM_655628.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3116.2), mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  cgagggcgacgaggacgacg 249
            ||||||||||||||||||||
Sbjct: 2049 cgagggcgacgaggacgacg 2068
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 53       cgatgtcgacgaggacgagctcct 76
                |||||||||||||||||| |||||
Sbjct: 20792869 cgatgtcgacgaggacgatctcct 20792892
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>ref|XM_747250.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g09760) partial
            mRNA
          Length = 2535

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   cagcgatgtcgacgaggacgagct 73
            |||||||| |||||||||||||||
Sbjct: 2055 cagcgatgacgacgaggacgagct 2032
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>ref|XM_386837.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06661.1)
            partial mRNA
          Length = 2292

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   gacagcgatgtcgacgagga 67
            ||||||||||||||||||||
Sbjct: 1900 gacagcgatgtcgacgagga 1919
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>gb|AF531959.1| Drosophila yakuba CG4456 mRNA, partial cds
          Length = 705

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 gcgacgaggacgacgactcc 254
           ||||||||||||||||||||
Sbjct: 410 gcgacgaggacgacgactcc 429
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>ref|XM_967502.1| PREDICTED: Tribolium castaneum similar to CG4849-PA (LOC661338),
          mRNA
          Length = 2913

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 48 gacagcgatgtcgacgaggacgag 71
          |||||||||| |||||||||||||
Sbjct: 52 gacagcgatgacgacgaggacgag 75
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>ref|XM_777360.1| PREDICTED: Strongylocentrotus purpuratus similar to CG14746-PA
           (LOC577110), mRNA
          Length = 1365

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 acgacgactccgatgtcgag 263
           ||||||||||||||||||||
Sbjct: 551 acgacgactccgatgtcgag 570
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>ref|NM_169423.2| Drosophila melanogaster Lk6 CG17342-RB, transcript variant B (Lk6),
            mRNA
          Length = 3979

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 236  cgacgaggacgacgactccgatgtcgag 263
            ||||||||||||||||| ||||| ||||
Sbjct: 3062 cgacgaggacgacgactacgatgacgag 3089
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>ref|NM_143729.2| Drosophila melanogaster Lk6 CG17342-RA, transcript variant A (Lk6),
            mRNA
          Length = 4428

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 236  cgacgaggacgacgactccgatgtcgag 263
            ||||||||||||||||| ||||| ||||
Sbjct: 3511 cgacgaggacgacgactacgatgacgag 3538
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>gb|AY056103.1| Arabidopsis thaliana AT3g10420/F13M14_30 mRNA, complete cds
          Length = 2147

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 ttcctccggcgacgaggacggagc 298
           |||||||||||||||||| |||||
Sbjct: 289 ttcctccggcgacgaggaaggagc 312
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>gb|U76378.1|DMU76378 Drosophila melanogaster LK6 protein kinase (LK6) mRNA, complete cds
          Length = 3453

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 236  cgacgaggacgacgactccgatgtcgag 263
            ||||||||||||||||| ||||| ||||
Sbjct: 2700 cgacgaggacgacgactacgatgacgag 2727
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>gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genomic sequence, complete
             sequence
          Length = 142047

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    cgatgtcgacgaggacgagctcct 76
             |||||||||||||||||| |||||
Sbjct: 83150 cgatgtcgacgaggacgatctcct 83173
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 236      cgacgaggacgacgactccg 255
                ||||||||||||||||||||
Sbjct: 24721875 cgacgaggacgacgactccg 24721856
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 53       cgatgtcgacgaggacgagctcct 76
                |||||||||||||||||| |||||
Sbjct: 20786069 cgatgtcgacgaggacgatctcct 20786092
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>emb|BX823284.1|CNS0A4R7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS1ZC02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2387

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 ttcctccggcgacgaggacggagc 298
           |||||||||||||||||| |||||
Sbjct: 420 ttcctccggcgacgaggaaggagc 443
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>gb|AC007805.5|AC007805 Drosophila melanogaster, chromosome 3R, region 86F-86F, BAC clone
              BACR11G22, complete sequence
          Length = 170324

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 236    cgacgaggacgacgactccgatgtcgag 263
              ||||||||||||||||| ||||| ||||
Sbjct: 127125 cgacgaggacgacgactacgatgacgag 127098
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>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12
              map MAP_LOC, complete sequence
          Length = 167323

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     cgatgtcgacgaggacgagctcct 76
              |||||||||||||||||| |||||
Sbjct: 129474 cgatgtcgacgaggacgatctcct 129451
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>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete
              sequence
          Length = 118107

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 275    ttcctccggcgacgaggacggagc 298
              |||||||||||||||||| |||||
Sbjct: 107740 ttcctccggcgacgaggaaggagc 107717
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>dbj|AK108842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-H08, full
            insert sequence
          Length = 4187

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  gagggcgacgaggacgacga 250
            ||||||||||||||||||||
Sbjct: 3946 gagggcgacgaggacgacga 3965
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>dbj|AK068853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169G11, full
           insert sequence
          Length = 2831

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 53  cgatgtcgacgaggacgagctcct 76
           |||||||||||||||||| |||||
Sbjct: 184 cgatgtcgacgaggacgatctcct 161
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>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
             chromosome 4, complete sequence
          Length = 90825

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   cgcgagggcgacgaggacga 247
             ||||||||||||||||||||
Sbjct: 24002 cgcgagggcgacgaggacga 23983
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>gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31 of 118 of the
            complete sequence
          Length = 226782

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 236  cgacgaggacgacgactccgatgtcgag 263
            ||||||||||||||||| ||||| ||||
Sbjct: 2618 cgacgaggacgacgactacgatgacgag 2591
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 236      cgacgaggacgacgactccg 255
                ||||||||||||||||||||
Sbjct: 24650081 cgacgaggacgacgactccg 24650062
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>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 140383

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   cgacgaggacgacgactccg 255
             ||||||||||||||||||||
Sbjct: 29032 cgacgaggacgacgactccg 29013
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>gb|M29328.1|AGMRSSPC3 African green monkey small polydisperse circular (spc) DNA, with
           two Alu repeats
          Length = 990

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 agccaccagcgcccggccgg 133
           ||||||||||||||||||||
Sbjct: 350 agccaccagcgcccggccgg 331


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,166,049
Number of Sequences: 3902068
Number of extensions: 2166049
Number of successful extensions: 60205
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59566
Number of HSP's gapped (non-prelim): 635
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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