ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_186392.1| Oryza sativa (japonica cultivar-group), mRNA 131 2e-27
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
3dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
4dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
6dbj|AK122037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.42
8emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.42
9emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103... 44 0.42
10gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 42 1.7
11gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.7
12gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.7
13gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 1.7
14emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.7
15emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, ... 42 1.7
16gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 1.7
17ref|NM_187950.1| Oryza sativa (japonica cultivar-group), Ozsa837... 40 6.6
18gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 6.6
19ref|XM_463596.1| Oryza sativa (japonica cultivar-group), predic... 40 6.6
20gb|AC141647.3| Mus musculus BAC clone RP23-64E12 from chromosome... 40 6.6
21gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosom... 40 6.6
22emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, compl... 40 6.6
23gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, com... 40 6.6
24gb|AC151605.2| Emiliania huxleyi clone JGIACCU-13A3, complete se... 40 6.6
25emb|BX322574.10| Zebrafish DNA sequence from clone DKEY-35I15 in... 40 6.6
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
27emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in l... 40 6.6
28dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
29dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:2... 40 6.6
30dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
31gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, com... 40 6.6
32ref|NM_013135.1| Rattus norvegicus RAS p21 protein activator 1 (... 40 6.6
33emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chro... 40 6.6
34gb|L13151.1|RATGAPX Rat GTPase-activating protein (GAP) gene, co... 40 6.6

>ref|NM_186392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2856

 Score =  131 bits (66), Expect = 2e-27
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                       
Query: 350 agctacgcactcgtcccggcggacgagctctcgcgagcgctcgccagacagaactccagt 409
           |||||||| ||||| ||||| |||||||||||||| | |||||| || || || || |||
Sbjct: 298 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgcgaggcaaaattctagt 357

                                                                       
Query: 410 ttggcattgcataataaacattcgtttgctgaagacagtgctggtgcttatcctttggtg 469
           ||||||||||||||||||||||| |||||||| || ||||||||||| || |||||||||
Sbjct: 358 ttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttggtg 417

                         
Query: 470 cttagaatttctgt 483
           ||||| || |||||
Sbjct: 418 cttaggatatctgt 431



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 128 tcctcctcctgccccgccgccgtctgcctcgtccctttcaggtggtgggcgggggtgcgc 187
           |||||||||| || | ||||||||||||||||||| ||||||||||||||| ||||| | 
Sbjct: 73  tcctcctcctcccactccgccgtctgcctcgtccccttcaggtggtgggcgagggtgagg 132

                    
Query: 188 gaggaggcg 196
           |||||||||
Sbjct: 133 gaggaggcg 141



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 266 ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 323
           |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 214 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 271



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                           
Query: 407     agtttggcattgcataataaacattcgtttgctgaagacagtgctggtgcttatcctttg 466
               |||||||||||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 3242526 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 3242585

                                
Query: 467     gtgcttagaatttctgt 483
               |||||||| || |||||
Sbjct: 3242586 gtgcttaggatatctgt 3242602



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 266     ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 323
               |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 3239572 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 3239629



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 128     tcctcctcctgccccgccgccgtctgcctcgtccctttcaggt 170
               |||||||||| || | ||||||||||||||||||| |||||||
Sbjct: 3239346 tcctcctcctcccactccgccgtctgcctcgtccccttcaggt 3239388



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 350     agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 393
               |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 3239656 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 3239699



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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                          
Query: 407    agtttggcattgcataataaacattcgtttgctgaagacagtgctggtgcttatcctttg 466
              |||||||||||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 157516 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 157575

                               
Query: 467    gtgcttagaatttctgt 483
              |||||||| || |||||
Sbjct: 157576 gtgcttaggatatctgt 157592



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                        
Query: 266    ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 323
              |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 154562 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 154619



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 128    tcctcctcctgccccgccgccgtctgcctcgtccctttcaggt 170
              |||||||||| || | ||||||||||||||||||| |||||||
Sbjct: 154336 tcctcctcctcccactccgccgtctgcctcgtccccttcaggt 154378



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 350    agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 393
              |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 154646 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 154689



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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 407   agtttggcattgcataataaacattcgtttgctgaagacagtgctggtgcttatcctttg 466
             |||||||||||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 52219 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 52278

                              
Query: 467   gtgcttagaatttctgt 483
             |||||||| || |||||
Sbjct: 52279 gtgcttaggatatctgt 52295



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 266   ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 323
             |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 49265 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 49322



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 128   tcctcctcctgccccgccgccgtctgcctcgtccctttcaggt 170
             |||||||||| || | ||||||||||||||||||| |||||||
Sbjct: 49039 tcctcctcctcccactccgccgtctgcctcgtccccttcaggt 49081



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 350   agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 393
             |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 49349 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 49392



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      tcctcctcctgccccgccgccg 149
                ||||||||||||||||||||||
Sbjct: 21325164 tcctcctcctgccccgccgccg 21325143



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      tcctcctcctgccccgccgccg 149
                ||||||||||||||||||||||
Sbjct: 21290002 tcctcctcctgccccgccgccg 21289981



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>dbj|AK122037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112P03, full
           insert sequence
          Length = 1245

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 128 tcctcctcctgccccgccgccg 149
           ||||||||||||||||||||||
Sbjct: 109 tcctcctcctgccccgccgccg 88



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      tcctcctcctgccccgccgccg 149
                ||||||||||||||||||||||
Sbjct: 21251383 tcctcctcctgccccgccgccg 21251362



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      tcctcctcctgccccgccgccg 149
                ||||||||||||||||||||||
Sbjct: 21216221 tcctcctcctgccccgccgccg 21216200



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>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb
           from chromosome 12 of cultivar Nipponbare of ssp.
           japonica of Oryza sativa (rice), complete sequence
          Length = 137571

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 128 tcctcctcctgccccgccgccg 149
           ||||||||||||||||||||||
Sbjct: 188 tcctcctcctgccccgccgccg 209



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>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 95132

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   tcctcctcctgccccgccgccg 149
             ||||||||||||||||||||||
Sbjct: 71276 tcctcctcctgccccgccgccg 71297



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   tcctcctcctgccccgccgccg 149
             ||||||||||||||||||||||
Sbjct: 36114 tcctcctcctgccccgccgccg 36135



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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 128   tcctcctcctgccccgccgccgtct 152
             |||||||||| ||||||||||||||
Sbjct: 26253 tcctcctcctcccccgccgccgtct 26277



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 294    tgctgcgcctcgaccgcggggagtgccgc 322
              ||||||||||||| ||||||||| |||||
Sbjct: 816560 tgctgcgcctcgagcgcggggagggccgc 816588



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 294     tgctgcgcctcgaccgcggggagtgccgc 322
               ||||||||||||| ||||||||| |||||
Sbjct: 1703279 tgctgcgcctcgagcgcggggagggccgc 1703307



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>gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough plasmid pDV,
              complete sequence
          Length = 202301

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 136    ctgccccgccgccgtctgcct 156
              |||||||||||||||||||||
Sbjct: 161465 ctgccccgccgccgtctgcct 161445



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 294     tgctgcgcctcgaccgcggggagtgccgc 322
               ||||||||||||| ||||||||| |||||
Sbjct: 1589992 tgctgcgcctcgagcgcggggagggccgc 1590020



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>emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, complete sequence
          Length = 261943

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 259    caggcttctccacagcttcctccac 283
              ||||||||||||||| |||||||||
Sbjct: 119847 caggcttctccacagattcctccac 119871



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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 220     cgcagccacgccggcggcctc 240
               |||||||||||||||||||||
Sbjct: 2453061 cgcagccacgccggcggcctc 2453081



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>ref|NM_187950.1| Oryza sativa (japonica cultivar-group), Ozsa8370 predicted mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 128 tcctcctcctgccccgccgccgtc 151
           |||||||||| |||||||||||||
Sbjct: 27  tcctcctcctcccccgccgccgtc 4



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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 291     tcgtgctgcgcctcgaccgc 310
               ||||||||||||||||||||
Sbjct: 2182181 tcgtgctgcgcctcgaccgc 2182200



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>ref|XM_463596.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 128 tcctcctcctgccccgccgccgtc 151
           |||||||||| |||||||||||||
Sbjct: 844 tcctcctcctcccccgccgccgtc 867



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>gb|AC141647.3| Mus musculus BAC clone RP23-64E12 from chromosome 10, complete sequence
          Length = 217745

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 455   gcttatcctttggtgcttagaatt 478
             |||||||||||||| |||||||||
Sbjct: 20444 gcttatcctttggttcttagaatt 20467



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>gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosome 10, complete sequence
          Length = 162143

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 455    gcttatcctttggtgcttagaatt 478
              |||||||||||||| |||||||||
Sbjct: 113112 gcttatcctttggttcttagaatt 113135



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>emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, complete sequence
          Length = 136520

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 276   tcctccacccagatctcgtgctgc 299
             ||||||||||||||||| ||||||
Sbjct: 48366 tcctccacccagatctcctgctgc 48343



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>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence
          Length = 203604

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   ttgctgaagacagtgctggt 454
             ||||||||||||||||||||
Sbjct: 96815 ttgctgaagacagtgctggt 96796



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>gb|AC151605.2| Emiliania huxleyi clone JGIACCU-13A3, complete sequence
          Length = 36153

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  ggtggtgggcgggggtgcgc 187
            ||||||||||||||||||||
Sbjct: 6070 ggtggtgggcgggggtgcgc 6089



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>emb|BX322574.10| Zebrafish DNA sequence from clone DKEY-35I15 in linkage group 3, complete
              sequence
          Length = 150999

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    tgcataataaacattcgttt 436
              ||||||||||||||||||||
Sbjct: 135471 tgcataataaacattcgttt 135452



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 128      tcctcctcctgccccgccgccgtc 151
                |||||||||| |||||||||||||
Sbjct: 39602578 tcctcctcctcccccgccgccgtc 39602601



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 128     tcctcctcctgccccgccgccgtc 151
               |||||||||| |||||||||||||
Sbjct: 8758512 tcctcctcctcccccgccgccgtc 8758489



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>emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in linkage group 3,
             complete sequence
          Length = 190575

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   tgcataataaacattcgttt 436
             ||||||||||||||||||||
Sbjct: 90806 tgcataataaacattcgttt 90825



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>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456E05
          Length = 173699

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   tcctcctcctgccccgccgccgtc 151
             |||||||||| |||||||||||||
Sbjct: 83534 tcctcctcctcccccgccgccgtc 83557



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>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   tcctccacccagatctcgtgctgc 299
             ||||||||||||||||| ||||||
Sbjct: 42316 tcctccacccagatctcctgctgc 42339



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>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0699D11
          Length = 140825

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 128   tcctcctcctgccccgccgccgtc 151
             |||||||||| |||||||||||||
Sbjct: 75969 tcctcctcctcccccgccgccgtc 75946



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>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence
          Length = 208140

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    ttgctgaagacagtgctggt 454
              ||||||||||||||||||||
Sbjct: 137617 ttgctgaagacagtgctggt 137598



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>ref|NM_013135.1| Rattus norvegicus RAS p21 protein activator 1 (Rasa1), mRNA
          Length = 3117

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 gaggaggcggcagaggaggg 207
           ||||||||||||||||||||
Sbjct: 394 gaggaggcggcagaggaggg 375



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>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete
             sequence
          Length = 151967

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   acagcttcctccacccagat 289
             ||||||||||||||||||||
Sbjct: 56582 acagcttcctccacccagat 56563



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>gb|L13151.1|RATGAPX Rat GTPase-activating protein (GAP) gene, complete cds
          Length = 3296

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 gaggaggcggcagaggaggg 207
           ||||||||||||||||||||
Sbjct: 491 gaggaggcggcagaggaggg 472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,463,667
Number of Sequences: 3902068
Number of extensions: 3463667
Number of successful extensions: 70987
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70534
Number of HSP's gapped (non-prelim): 453
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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