ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl20f01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478222.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2901 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 287 accatcgagatcaacatcaagaccctggagtcgcaagtgcacaagctccgggtcgacaag 346 ||||| |||||||||||||| |||||||| || ||||| || |||||||| || | ||| Sbjct: 67 accattgagatcaacatcaaaaccctggattcacaagttcataagctccgtgttaagaag 126 Query: 347 aatgagactgttctgaacctgaaggagaagatagtaga 384 |||| |||||||| ||| || |||||||||||||| Sbjct: 127 aatgtacctgttctggtccttaaagagaagatagtaga 164
>ref|XM_506351.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1197_D06.108 patrial mRNA Length = 3655 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 287 accatcgagatcaacatcaagaccctggagtcgcaagtgcacaagctccgggtcgacaag 346 ||||| |||||||||||||| |||||||| || ||||| || |||||||| || | ||| Sbjct: 362 accattgagatcaacatcaaaaccctggattcacaagttcataagctccgtgttaagaag 421 Query: 347 aatgagactgttctgaacctgaaggagaagatagtaga 384 |||| |||||||| ||| || |||||||||||||| Sbjct: 422 aatgtacctgttctggtccttaaagagaagatagtaga 459
>dbj|AB078881.1| Oryza sativa CRTintP mRNA for calreticulin interacted protein, complete cds Length = 3401 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 287 accatcgagatcaacatcaagaccctggagtcgcaagtgcacaagctccgggtcgacaag 346 ||||| |||||||||||||| |||||||| || ||||| || |||||||| || | ||| Sbjct: 362 accattgagatcaacatcaaaaccctggattcacaagttcataagctccgtgttaagaag 421 Query: 347 aatgagactgttctgaacctgaaggagaagatagtaga 384 |||| |||||||| ||| || |||||||||||||| Sbjct: 422 aatgtacctgttctggtccttaaagagaagatagtaga 459
>dbj|AK072589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F22, full insert sequence Length = 2307 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 287 accatcgagatcaacatcaagaccctggagtcgcaagtgcacaagctccgggtcgacaag 346 ||||| |||||||||||||| |||||||| || ||||| || |||||||| || | ||| Sbjct: 363 accattgagatcaacatcaaaaccctggattcacaagttcataagctccgtgttaagaag 422 Query: 347 aatgagactgttctgaacctgaaggagaagatagtaga 384 |||| |||||||| ||| || |||||||||||||| Sbjct: 423 aatgtacctgttctggtccttaaagagaagatagtaga 460
>dbj|AK065220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002G13, full insert sequence Length = 3655 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 287 accatcgagatcaacatcaagaccctggagtcgcaagtgcacaagctccgggtcgacaag 346 ||||| |||||||||||||| |||||||| || ||||| || |||||||| || | ||| Sbjct: 362 accattgagatcaacatcaaaaccctggattcacaagttcataagctccgtgttaagaag 421 Query: 347 aatgagactgttctgaacctgaaggagaagatagtaga 384 |||| |||||||| ||| || |||||||||||||| Sbjct: 422 aatgtacctgttctggtccttaaagagaagatagtaga 459
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 287 accatcgagatcaacatcaagaccctggagtcgcaagtgcacaagctccg 336 ||||| |||||||||||||| |||||||| || ||||| || |||||||| Sbjct: 18671139 accattgagatcaacatcaaaaccctggattcacaagttcataagctccg 18671090 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctcctcctctccgcctccga 43 |||||||||||||||||||| Sbjct: 1020519 ctcctcctctccgcctccga 1020500
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 287 accatcgagatcaacatcaagaccctggagtcgcaagtgcacaagctccg 336 ||||| |||||||||||||| |||||||| || ||||| || |||||||| Sbjct: 96193 accattgagatcaacatcaaaaccctggattcacaagttcataagctccg 96144
>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0055I24 Length = 155872 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 287 accatcgagatcaacatcaagaccctggagtcgcaagtgcacaagctccg 336 ||||| |||||||||||||| |||||||| || ||||| || |||||||| Sbjct: 3427 accattgagatcaacatcaaaaccctggattcacaagttcataagctccg 3378
>gb|DQ217371.1| Synthetic construct polyphenol oxidase mRNA, partial cds Length = 1701 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 gccgccgttcccggtcgacctcg 126 ||||||||||||||||||||||| Sbjct: 723 gccgccgttcccggtcgacctcg 745
>gb|AC161206.10| Mus musculus chromosome 15, clone RP24-299A13, complete sequence Length = 165791 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 13 tcttctcccctctcctcctctcc 35 ||||||||||||||||||||||| Sbjct: 30974 tcttctcccctctcctcctctcc 30952
>gb|BT009357.1| Triticum aestivum clone wlm96.pk0023.a11:fis, full insert mRNA sequence Length = 1993 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 gccgccgttcccggtcgacctcg 126 ||||||||||||||||||||||| Sbjct: 770 gccgccgttcccggtcgacctcg 792
>gb|AC104225.18| Mus musculus chromosome 15, clone RP23-74H8, complete sequence Length = 246325 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 13 tcttctcccctctcctcctctcc 35 ||||||||||||||||||||||| Sbjct: 121807 tcttctcccctctcctcctctcc 121785
>gb|AC122521.4| Mus musculus BAC clone RP24-476C7 from chromosome 6, complete sequence Length = 142127 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctcc 35 |||||||||||||||||||||| Sbjct: 69706 cttctcccctctcctcctctcc 69727
>gb|BC066695.1| Danio rerio zgc:76988, mRNA (cDNA clone MGC:76988 IMAGE:6525951), complete cds Length = 2420 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 tccatcgcttcttctcccctctcctc 29 |||||||| ||||||||||||||||| Sbjct: 863 tccatcgcatcttctcccctctcctc 838
>gb|AF129005.1|AF129005 Mus musculus VNO olfactory cluster Length = 198515 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctcc 35 |||||||||||||||||||||| Sbjct: 195643 cttctcccctctcctcctctcc 195664
>ref|NM_212642.1| Danio rerio zgc:76988 (zgc:76988), mRNA Length = 2420 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 tccatcgcttcttctcccctctcctc 29 |||||||| ||||||||||||||||| Sbjct: 863 tccatcgcatcttctcccctctcctc 838
>ref|XM_474029.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 261 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 207 cttctccgctctcctcctctccgcc 183
>ref|XM_474028.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 264 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 210 cttctccgctctcctcctctccgcc 186
>ref|XM_474027.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 264 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 207 cttctccgctctcctcctctccgcc 183
>ref|XM_474023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 261 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 207 cttctccgctctcctcctctccgcc 183
>ref|XM_464411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1497 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 tcccctctcctcctctccgcctccg 42 |||||||||| |||||||||||||| Sbjct: 68 tcccctctccgcctctccgcctccg 92
>ref|NM_030918.5| Homo sapiens sorting nexin family member 27 (SNX27), mRNA Length = 7085 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 132 ccgcctcccccgccgccgttcccgg 108
>ref|XM_513801.1| PREDICTED: Pan troglodytes LOC457299 (LOC457299), mRNA Length = 1642 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 132 ccgcctcccccgccgccgttcccgg 108
>ref|XM_363365.1| Magnaporthe grisea 70-15 hypothetical protein (MG01291.4) partial mRNA Length = 2370 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gtgcacaagctccgggtcgac 343 ||||||||||||||||||||| Sbjct: 984 gtgcacaagctccgggtcgac 964
>ref|XM_864791.1| PREDICTED: Bos taurus similar to PDZ protein Mrt1, transcript variant 2 (LOC513214), mRNA Length = 1886 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 295 ccgcctcccccgccgccgttcccgg 271
>ref|XM_874161.1| PREDICTED: Bos taurus similar to PDZ protein Mrt1, transcript variant 4 (LOC513214), mRNA Length = 1804 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 295 ccgcctcccccgccgccgttcccgg 271
>ref|XM_873981.1| PREDICTED: Bos taurus similar to PDZ protein Mrt1, transcript variant 3 (LOC513214), mRNA Length = 1625 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 247 ccgcctcccccgccgccgttcccgg 223
>gb|AC113483.7| Mus musculus chromosome 1, clone RP23-343E12, complete sequence Length = 207188 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttcttctcccctctcctcctctcc 35 |||| |||||||||||||||||||| Sbjct: 27775 cttcctctcccctctcctcctctcc 27751
>gb|AC134832.5| Mus musculus BAC clone RP24-561D12 from chromosome 7, complete sequence Length = 158123 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 tctgaacctgaaggagaagatagta 382 |||||||||| |||||||||||||| Sbjct: 79754 tctgaacctggaggagaagatagta 79778
>gb|BC012184.1| Homo sapiens sorting nexin family member 27, mRNA (cDNA clone IMAGE:4558536), complete cds Length = 2508 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 253 ccgcctcccccgccgccgttcccgg 229
>emb|AL391335.32| Human DNA sequence from clone RP11-404E16 on chromosome 1 Contains the 5' end of the SNX27 gene for sorting nexin family member 27 and three CpG islands, complete sequence Length = 82901 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 15594 ccgcctcccccgccgccgttcccgg 15570
>gb|AC098563.6| Rattus norvegicus 1 BAC CH230-123A15 (Children's Hospital Oakland Research Institute) complete sequence Length = 250414 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 tctgaacctgaaggagaagatagta 382 |||||||||| |||||||||||||| Sbjct: 241674 tctgaacctggaggagaagatagta 241698
>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part of a novel gene and a CpG island, complete sequence Length = 120529 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cttcttctcccctctcctcctctcc 35 |||||||||||||| |||||||||| Sbjct: 17361 cttcttctcccctcgcctcctctcc 17337
>gb|AC156549.8| Mus musculus chromosome 1, clone RP24-104O22, complete sequence Length = 164489 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttcttctcccctctcctcctctcc 35 |||| |||||||||||||||||||| Sbjct: 24909 cttcctctcccctctcctcctctcc 24933
>gb|BC101000.1| Homo sapiens sorting nexin family member 27, mRNA (cDNA clone MGC:119365 IMAGE:40006281), complete cds Length = 1706 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 132 ccgcctcccccgccgccgttcccgg 108
>gb|BC100998.1| Homo sapiens sorting nexin family member 27, mRNA (cDNA clone MGC:119362 IMAGE:40006277), complete cds Length = 1706 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 132 ccgcctcccccgccgccgttcccgg 108
>gb|BC100999.1| Homo sapiens sorting nexin family member 27, mRNA (cDNA clone MGC:119364 IMAGE:40006279), complete cds Length = 1704 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 130 ccgcctcccccgccgccgttcccgg 106
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09, complete sequence Length = 159502 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 141161 cttctccgctctcctcctctccgcc 141185 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 137160 cttctccgctctcctcctctccgcc 137184 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 127040 cttctccgctctcctcctctccgcc 127064 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 105646 cttctccgctctcctcctctccgcc 105670
>emb|AL669941.12| Mouse DNA sequence from clone RP23-288B4 on chromosome 11 no genes, complete sequence Length = 216199 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ttcttctcccctctcctcctc 32 ||||||||||||||||||||| Sbjct: 176672 ttcttctcccctctcctcctc 176652
>dbj|AK031587.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030456M18 product:lymphocyte specific 1, full insert sequence Length = 2667 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 tctgaacctgaaggagaagatagta 382 |||||||||| |||||||||||||| Sbjct: 1991 tctgaacctggaggagaagatagta 1967
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 32371572 cttctccgctctcctcctctccgcc 32371596 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 32367577 cttctccgctctcctcctctccgcc 32367601 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 32357457 cttctccgctctcctcctctccgcc 32357481 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 32336063 cttctccgctctcctcctctccgcc 32336087
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttcttctcccctctcctcctctcc 35 ||||||||| ||||||||||||||| Sbjct: 25745233 cttcttctctcctctcctcctctcc 25745257
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 ccctctcctcctctccgcctccgag 44 ||||||||||||| ||||||||||| Sbjct: 8088165 ccctctcctcctcgccgcctccgag 8088141 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 tcccctctcctcctctccgcctccg 42 |||||||||| |||||||||||||| Sbjct: 5043239 tcccctctccgcctctccgcctccg 5043215
>dbj|AB007957.2| Homo sapiens mRNA, chromosome 1 specific transcript KIAA0488 Length = 7056 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 101 ccgcctcccccgccgccgttcccgg 77
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 tcccctctcctcctctccgcctccg 42 |||||||||| |||||||||||||| Sbjct: 114365 tcccctctccgcctctccgcctccg 114341
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 ccctctcctcctctccgcctccgag 44 ||||||||||||| ||||||||||| Sbjct: 76358 ccctctcctcctcgccgcctccgag 76334
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttcttctcccctctcctcctctcc 35 ||||||||| ||||||||||||||| Sbjct: 27437 cttcttctctcctctcctcctctcc 27461
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 tcccctctcctcctctccgcctccg 42 |||||||||| |||||||||||||| Sbjct: 3737 tcccctctccgcctctccgcctccg 3713
>emb|BX005454.5| Zebrafish DNA sequence from clone CH211-177N13 in linkage group 14, complete sequence Length = 63109 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ttcttctcccctctcctcctc 32 ||||||||||||||||||||| Sbjct: 11425 ttcttctcccctctcctcctc 11445
>dbj|AK119684.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A03, full insert sequence Length = 536 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 323 cttctccgctctcctcctctccgcc 299
>dbj|AK057854.1| Homo sapiens cDNA FLJ25125 fis, clone CBR06447, highly similar to BETA-SYNUCLEIN Length = 1544 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 305 ccgcctcccccgccgccgttcccgg 281
>dbj|AK099853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H01, full insert sequence Length = 1496 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 tcccctctcctcctctccgcctccg 42 |||||||||| |||||||||||||| Sbjct: 67 tcccctctccgcctctccgcctccg 91
>dbj|AK069933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036C16, full insert sequence Length = 541 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 328 cttctccgctctcctcctctccgcc 304
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete sequence Length = 73187 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 66976 cttctccgctctcctcctctccgcc 67000 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 64908 cttctccgctctcctcctctccgcc 64932 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgc 37 ||||||| |||||||||||||||| Sbjct: 72566 cttctccgctctcctcctctccgc 72589
>emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0410G08, complete sequence Length = 63554 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 32987 cttctccgctctcctcctctccgcc 33011 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 29029 cttctccgctctcctcctctccgcc 29053 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 21700 cttctccgctctcctcctctccgcc 21724 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcc 38 ||||||| ||||||||||||||||| Sbjct: 19632 cttctccgctctcctcctctccgcc 19656 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgc 37 ||||||| |||||||||||||||| Sbjct: 27290 cttctccgctctcctcctctccgc 27313
>emb|Z73578.1|SCYPL222W S.cerevisiae chromosome XVI reading frame ORF YPL222w Length = 3904 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ctctcctcctctccgcctccg 42 ||||||||||||||||||||| Sbjct: 3369 ctctcctcctctccgcctccg 3349
>emb|Z73577.1|SCYPL221W S.cerevisiae chromosome XVI reading frame ORF YPL221w Length = 3561 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ctctcctcctctccgcctccg 42 ||||||||||||||||||||| Sbjct: 279 ctctcctcctctccgcctccg 259
>gb|BC101824.1| Homo sapiens sorting nexin family member 27, mRNA (cDNA clone MGC:126873 IMAGE:8069330), complete cds Length = 1715 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 167 ccgcctcccccgccgccgttcccgg 143
>gb|BC101822.1| Homo sapiens sorting nexin family member 27, mRNA (cDNA clone MGC:126871 IMAGE:8069328), complete cds Length = 1715 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccgcctccctcgccgccgttcccgg 117 ||||||||| ||||||||||||||| Sbjct: 167 ccgcctcccccgccgccgttcccgg 143
>gb|AC124553.4| Mus musculus BAC clone RP23-223I5 from 1, complete sequence Length = 179316 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cttcttctcccctctcctcctctcc 35 |||||||||||||| |||||||||| Sbjct: 29513 cttcttctcccctcccctcctctcc 29537
>emb|AL603651.14| Mouse DNA sequence from clone RP23-398J2 on chromosome 7, complete sequence Length = 205942 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 tctgaacctgaaggagaagatagta 382 |||||||||| |||||||||||||| Sbjct: 47698 tctgaacctggaggagaagatagta 47722
>dbj|AP003183.2| Mus musculus genomic DNA, chromosome 7 clone:B229F13, complete sequences Length = 101491 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 tctgaacctgaaggagaagatagta 382 |||||||||| |||||||||||||| Sbjct: 95954 tctgaacctggaggagaagatagta 95978
>gb|AC102288.11| Mus musculus chromosome 18, clone RP24-346H24, complete sequence Length = 154552 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ctcctcctctccgcctccgagtcc 47 |||||||||||| ||||||||||| Sbjct: 2349 ctcctcctctcctcctccgagtcc 2372
>gb|AC098644.4| Takifugu rubripes clone 205P11, complete sequence Length = 89481 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 38764 tctcccctctcctcctctcc 38745
>ref|NM_019722.3| Mus musculus ADP-ribosylation factor-like 2 (Arl2), mRNA Length = 869 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 185 tcaacatcaagaccctggag 204
>ref|XM_476419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2974 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ctcctcctctccgcctccga 43 |||||||||||||||||||| Sbjct: 96 ctcctcctctccgcctccga 115
>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence Length = 223764 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 106927 catcgagatcaacatcaaga 106946
>ref|NM_001667.1| Homo sapiens ADP-ribosylation factor-like 2 (ARL2), mRNA Length = 902 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 160 tcaacatcaagaccctggag 179
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctctccgcctcc 41 ||||||||||||| |||||||| ||||| Sbjct: 84003 cttctcccctctcatcctctcctcctcc 83976
>gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, complete sequence Length = 211071 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 34109 tctcccctctcctcctctcc 34128
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 cgccctgctccctcccctcccgccgcgc 155 |||| |||||||||||||| |||||||| Sbjct: 120205 cgccgtgctccctcccctcgcgccgcgc 120232
>gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, complete sequence Length = 147125 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 19069 tctcccctctcctcctctcc 19050
>gb|AC104553.7| Mus musculus chromosome 15, clone RP24-160M22, complete sequence Length = 155191 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cccctctcctcctctccgcc 38 |||||||||||||||||||| Sbjct: 14707 cccctctcctcctctccgcc 14688
>gb|AC120237.5| Rattus norvegicus 1 BAC CH230-453N3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 150760 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 26381 tcaacatcaagaccctggag 26362
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 11 cttcttctcccctctcctcctctccgcctccg 42 ||||||||||| ||| ||||||||||||||| Sbjct: 92948 cttcttctccctcctcatcctctccgcctccg 92979
>gb|BC075634.1| Mus musculus RIKEN cDNA 3732412D22 gene, mRNA (cDNA clone MGC:100029 IMAGE:30544497), complete cds Length = 4698 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 1516 catcgagatcaacatcaaga 1535
>gb|AC147225.3| Mus musculus BAC clone RP23-105L19 from chromosome 6, complete sequence Length = 210239 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctct 33 |||||||||||||||||||| Sbjct: 81937 cttctcccctctcctcctct 81918
>gb|BC060259.1| Mus musculus ADP-ribosylation factor-like 2, mRNA (cDNA clone MGC:69604 IMAGE:5709669), complete cds Length = 931 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 175 tcaacatcaagaccctggag 194
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 cgccctgctccctcccctcccgccgcgc 155 |||| |||||||||||||| |||||||| Sbjct: 11126 cgccgtgctccctcccctcgcgccgcgc 11153
>gb|AC168278.2| Mus musculus BAC RP24-83C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 247493 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctct 33 |||||||||||||||||||| Sbjct: 234871 cttctcccctctcctcctct 234890
>gb|AC147017.4| Pan troglodytes BAC clone RP43-77F5 from 7, complete sequence Length = 178288 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctcccctctcctcctctccgcctc 40 ||||||||||||||||||| |||| Sbjct: 73278 ctcccctctcctcctctcctcctc 73255
>gb|AC126437.3| Mus musculus BAC clone RP24-211B22 from chromosome 14, complete sequence Length = 167869 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ttcttctcccctctcctcctctcc 35 ||||||||||||| |||||||||| Sbjct: 121654 ttcttctcccctcccctcctctcc 121631
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttctcccctctcctcctc 32 |||||||||||||||||||| Sbjct: 33196584 tcttctcccctctcctcctc 33196565
>gb|AF143680.1| Mus musculus arf-like protein 2 (ARL2) mRNA, complete cds Length = 555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 149 tcaacatcaagaccctggag 168
>gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosome 6, complete sequence Length = 194892 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 60422 tctcccctctcctcctctcc 60403
>gb|AC162901.4| Mus musculus BAC clone RP23-417K5 from chromosome 8, complete sequence Length = 205244 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tcccctctcctcctctccgcctcc 41 |||||||||||||||||| ||||| Sbjct: 197858 tcccctctcctcctctcctcctcc 197881
>gb|AC073336.6| Homo sapiens BAC clone RP11-476H24 from 7, complete sequence Length = 166261 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctcccctctcctcctctccgcctc 40 ||||||||||||||||||| |||| Sbjct: 70049 ctcccctctcctcctctcctcctc 70026
>gb|AY480051.1| Homo sapiens plectin 11 mRNA, complete cds Length = 14797 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6393 ccgccgggccgcctccgcctcgcc 6370
>gb|AY480050.1| Homo sapiens plectin 10 mRNA, complete cds Length = 14689 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6285 ccgccgggccgcctccgcctcgcc 6262
>gb|AY480049.1| Homo sapiens plectin 8 mRNA, complete cds Length = 14675 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6271 ccgccgggccgcctccgcctcgcc 6248
>gb|AY480048.1| Homo sapiens plectin 7 mRNA, complete cds Length = 14646 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6242 ccgccgggccgcctccgcctcgcc 6219
>gb|AY480047.1| Homo sapiens plectin 6 mRNA, complete cds Length = 15249 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6845 ccgccgggccgcctccgcctcgcc 6822
>gb|AY480046.1| Homo sapiens plectin 3 mRNA, complete cds Length = 14751 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6347 ccgccgggccgcctccgcctcgcc 6324
>gb|AY480045.1| Homo sapiens plectin 2 mRNA, complete cds Length = 14626 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6222 ccgccgggccgcctccgcctcgcc 6199
>gb|AY480044.1| Homo sapiens plectin 1 mRNA, complete cds Length = 14755 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6351 ccgccgggccgcctccgcctcgcc 6328
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 ccgtgccgcctccgcctcgccatc 84 |||||||||| ||||||||||||| Sbjct: 2462745 ccgtgccgccaccgcctcgccatc 2462722
>gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosome 19, complete sequence Length = 160122 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 45327 tcaacatcaagaccctggag 45346
>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence Length = 230218 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 79233 tctcccctctcctcctctcc 79252
>gb|AC129492.6| Homo sapiens chromosome 17, clone RP11-599B13, complete sequence Length = 196037 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgctccctcccctcccgcc 151 |||||||||||||||||||| Sbjct: 118893 ctgctccctcccctcccgcc 118912
>ref|NM_000445.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 1, mRNA Length = 14755 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6351 ccgccgggccgcctccgcctcgcc 6328
>ref|NM_201378.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 2, mRNA Length = 14626 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6222 ccgccgggccgcctccgcctcgcc 6199
>ref|NM_201379.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 3, mRNA Length = 14751 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6347 ccgccgggccgcctccgcctcgcc 6324
>ref|NM_201380.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 6, mRNA Length = 15249 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6845 ccgccgggccgcctccgcctcgcc 6822
>ref|NM_201381.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 7, mRNA Length = 14646 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6242 ccgccgggccgcctccgcctcgcc 6219
>ref|NM_201383.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 10, mRNA Length = 14689 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6285 ccgccgggccgcctccgcctcgcc 6262
>ref|NM_201382.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 8, mRNA Length = 14675 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6271 ccgccgggccgcctccgcctcgcc 6248
>ref|NM_201384.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 11, mRNA Length = 14797 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6393 ccgccgggccgcctccgcctcgcc 6370
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold Length = 574594 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ttcttctcccctctcctcctctcc 35 ||||||||||||||| |||||||| Sbjct: 175237 ttcttctcccctctcttcctctcc 175260
>ref|XM_666688.1| Plasmodium berghei strain ANKA hypothetical protein (PB400270.00.0) partial mRNA Length = 233 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttctcccctctcctcctc 32 |||||||||||||||||||| Sbjct: 92 tcttctcccctctcctcctc 111
>gb|AC166254.5| Mus musculus 6 BAC RP24-409O18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 201023 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctct 33 |||||||||||||||||||| Sbjct: 182065 cttctcccctctcctcctct 182046
>emb|AL591431.8| Human DNA sequence from clone RP11-1057F13 on chromosome Xq21.1-21.2 Contains the 5' end of a novel pseudogene, gene MGC26999 and a CpG island, complete sequence Length = 151017 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ttctcccctctcctcctctc 34 |||||||||||||||||||| Sbjct: 84933 ttctcccctctcctcctctc 84952
>emb|AL590609.15| Human DNA sequence from clone RP11-4M23 on chromosome 1 Contains the 5' end of the FUCA1 gene for alpha-L- 1 fucosidase (tissue), the CNR2 gene for cannabinoid receptor 2 (macrophage), a BTB (POZ) domain-containing 6 (BTBD6) pseudogene, a novel gene, an H3 histone family 3A (H3F3A) pseudogene, the PNRC2 gene for proline-rich nuclear receptor coactivator 2, the FUS1P1 gene for FUS interacting protein (serine-arginine rich) 1, a ribosomal protein L36 (RPL36) pseudogene and seven CpG islands, complete sequence Length = 172307 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttctcccctctcctcctc 32 |||||||||||||||||||| Sbjct: 144021 tcttctcccctctcctcctc 144040
>emb|AL390244.19| Human DNA sequence from clone RP11-280F22 on chromosome 10, complete sequence Length = 101530 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 79269 tctcccctctcctcctctcc 79288
>gb|AY341245.1| Homo sapiens chromosome condensation 1-like (CHC1L) gene, complete cds Length = 37676 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 28679 tctcccctctcctcctctcc 28698
>emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chromosome 13 Contains the CHC1L gene for chromosome condensation 1-like, 3 novel genes and a CpG island, complete sequence Length = 114519 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 8440 tctcccctctcctcctctcc 8421
>gb|AC090734.6| Homo sapiens chromosome 15, clone RP11-317N6, complete sequence Length = 71502 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 37026 tctcccctctcctcctctcc 37045
>gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, complete sequence Length = 225231 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ctcctcctctccgcctccgagtcc 47 |||||||||||| ||||||||||| Sbjct: 168649 ctcctcctctcctcctccgagtcc 168672
>emb|Y12708.1|RNARL184 R.norvegicus mRNA for ADP-ribosylation factor-like protein ARL184 Length = 893 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 179 tcaacatcaagaccctggag 198
>gb|AC155807.3| Mus musculus BAC clone RP24-303N21 from chromosome 8, complete sequence Length = 167996 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tcccctctcctcctctccgcctcc 41 |||||||||||||||||| ||||| Sbjct: 42661 tcccctctcctcctctcctcctcc 42684
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence Length = 215342 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 148230 ccgccgggccgcctccgcctcgcc 148207
>gb|BT008026.1| Synthetic construct Homo sapiens ADP-ribosylation factor-like 2 mRNA, partial cds Length = 555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 149 tcaacatcaagaccctggag 168
>gb|BT006674.1| Homo sapiens ADP-ribosylation factor-like 2 mRNA, complete cds Length = 555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 149 tcaacatcaagaccctggag 168
>gb|AC087500.16| Homo sapiens chromosome 17, clone RP11-333E1, complete sequence Length = 170770 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ccctcccctcccgccgcgct 156 |||||||||||||||||||| Sbjct: 40576 ccctcccctcccgccgcgct 40557
>gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, complete sequence Length = 232927 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 191253 tctcccctctcctcctctcc 191272
>gb|AC015727.7| Homo sapiens chromosome 17, clone RP11-420A6, complete sequence Length = 117542 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ccctcccctcccgccgcgct 156 |||||||||||||||||||| Sbjct: 14477 ccctcccctcccgccgcgct 14496
>gb|AC150683.3| Mus musculus BAC clone RP23-435E16 from chromosome 7, complete sequence Length = 198646 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 25781 tctcccctctcctcctctcc 25762
>gb|AC104762.7| Homo sapiens chromosome 17, clone RP11-769H22, complete sequence Length = 162678 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgctccctcccctcccgcc 151 |||||||||||||||||||| Sbjct: 118892 ctgctccctcccctcccgcc 118911
>emb|Z54367.1|HSPLECTIN H.sapiens gene for plectin Length = 14189 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6675 ccgccgggccgcctccgcctcgcc 6652
>dbj|AK096447.1| Homo sapiens cDNA FLJ39128 fis, clone NTONG2007658, highly similar to Homo sapiens sorting nexin 15 (SNX15) mRNA Length = 2396 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 177 tcaacatcaagaccctggag 196
>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown, complete sequence Length = 199332 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttctcccctctcctcctc 32 |||||||||||||||||||| Sbjct: 105264 tcttctcccctctcctcctc 105245
>gb|AF493888.1| Homo sapiens ADP-ribosylation factor-like protein 2 (ARL2) mRNA, complete cds Length = 555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 149 tcaacatcaagaccctggag 168
>dbj|AK134095.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830435G06 product:hypothetical Zn-binding protein, LIM containing protein, full insert sequence Length = 4653 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 1472 catcgagatcaacatcaaga 1491
>dbj|AK147547.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1073E02 product:hypothetical Zn-binding protein, LIM containing protein, full insert sequence Length = 5905 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 1672 catcgagatcaacatcaaga 1691
>gb|U53204.1|HSU53204 Human plectin (PLEC1) mRNA, complete cds Length = 14800 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 6396 ccgccgggccgcctccgcctcgcc 6373
>gb|U63610.1|HSPLEC1S3 Human plectin (PLEC1) gene, exons 3-32, and complete cds Length = 22693 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 14122 ccgccgggccgcctccgcctcgcc 14099
>gb|AC159259.2| Mus musculus BAC clone RP24-83G17 from chromosome 3, complete sequence Length = 191517 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 109640 tctcccctctcctcctctcc 109621
>gb|BC042189.1| Mus musculus RIKEN cDNA 3732412D22 gene, mRNA (cDNA clone IMAGE:3153656), partial cds Length = 4183 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 988 catcgagatcaacatcaaga 1007
>dbj|AK019457.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732412D22 product:hypothetical Glutamic acid-rich region containing protein, full insert sequence Length = 2456 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 1703 catcgagatcaacatcaaga 1722
>gb|BC052938.1| Mus musculus ADP-ribosylation factor-like 2, mRNA (cDNA clone IMAGE:30017862), with apparent retained intron Length = 2313 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 164 tcaacatcaagaccctggag 183
>gb|BC080803.1| Mus musculus ADP-ribosylation factor-like 2, mRNA (cDNA clone IMAGE:5363634), with apparent retained intron Length = 2309 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 188 tcaacatcaagaccctggag 207
>dbj|AK011366.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610009M23 product:arf-like protein 2 (ARL2) mRNA, full insert sequence Length = 869 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 185 tcaacatcaagaccctggag 204
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 11 cttcttctcccctctcctcctctccgcctccg 42 ||||||||||| ||| ||||||||||||||| Sbjct: 18513633 cttcttctccctcctcatcctctccgcctccg 18513664 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcctcc 41 ||||||||||||| |||||||| ||||| Sbjct: 11529785 cttctcccctctcatcctctcctcctcc 11529812
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 cgccctgctccctcccctcccgccgcgc 155 |||| |||||||||||||| |||||||| Sbjct: 28692413 cgccgtgctccctcccctcgcgccgcgc 28692440
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttctcccctctcctcctc 32 |||||||||||||||||||| Sbjct: 33287094 tcttctcccctctcctcctc 33287075
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttctcccctctcctcctc 32 |||||||||||||||||||| Sbjct: 47971 tcttctcccctctcctcctc 47990
>dbj|AK223502.1| Homo sapiens mRNA for ADP-ribosylation factor-like 2 variant, clone: FCC121D06 Length = 663 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 222 tcaacatcaagaccctggag 241
>ref|NM_031711.1| Rattus norvegicus ADP-ribosylation factor-like 2 (Arl2), mRNA Length = 893 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 179 tcaacatcaagaccctggag 198
>ref|XM_223397.3| PREDICTED: Rattus norvegicus similar to hypothetical protein (predicted) (LOC305332), mRNA Length = 8112 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 4872 catcgagatcaacatcaaga 4891
>gb|AC130329.8| Homo sapiens chromosome 17, clone RP13-348C17, complete sequence Length = 74378 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ctgctccctcccctcccgcc 151 |||||||||||||||||||| Sbjct: 59415 ctgctccctcccctcccgcc 59396
>gb|AC167566.1| Mus musculus BAC clone RP24-84B10 from chromosome 14, complete sequence Length = 187792 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cttcttctcccctctcctcc 30 |||||||||||||||||||| Sbjct: 46952 cttcttctcccctctcctcc 46933
>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_A04 Length = 128906 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctcctcctctccgcctccga 43 |||||||||||||||||||| Sbjct: 124866 ctcctcctctccgcctccga 124847
>emb|BX679662.5| Mouse DNA sequence from clone RP23-364B23 on chromosome 2, complete sequence Length = 59823 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ttcttctcccctctcctcctctcc 35 ||||||||||||| |||||||||| Sbjct: 18971 ttcttctcccctcccctcctctcc 18994
>gb|AY891824.1| Synthetic construct Homo sapiens clone FLH025316.01L ADP-ribosylation factor-like 2 (ARL2) mRNA, partial cds Length = 555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 149 tcaacatcaagaccctggag 168
>gb|AY889335.1| Synthetic construct Homo sapiens clone FLH025321.01X ADP-ribosylation factor-like 2 (ARL2) mRNA, complete cds Length = 555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 149 tcaacatcaagaccctggag 168
>gb|AY889334.1| Synthetic construct Homo sapiens clone FLH025320.01X ADP-ribosylation factor-like 2 (ARL2) mRNA, complete cds Length = 555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 149 tcaacatcaagaccctggag 168
>ref|XM_320180.1| Anopheles gambiae str. PEST ENSANGP00000011806 (ENSANGG00000009317), partial mRNA Length = 1410 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gccaccatcgagatcaacat 303 |||||||||||||||||||| Sbjct: 989 gccaccatcgagatcaacat 970
>dbj|AK069889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040N08, full insert sequence Length = 2975 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ctcctcctctccgcctccga 43 |||||||||||||||||||| Sbjct: 97 ctcctcctctccgcctccga 116
>dbj|AK069554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D15, full insert sequence Length = 1872 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 11 cttcttctcccctctcctcctctccgcctccg 42 ||||||||||| ||| ||||||||||||||| Sbjct: 174 cttcttctccctcctcatcctctccgcctccg 143
>gb|BC002530.2| Homo sapiens ADP-ribosylation factor-like 2, mRNA (cDNA clone MGC:1800 IMAGE:3140402), complete cds Length = 956 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 176 tcaacatcaagaccctggag 195
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctcctcctctccgcctccga 43 |||||||||||||||||||| Sbjct: 18107 ctcctcctctccgcctccga 18088
>emb|AL049838.3|CNS0000C Human chromosome 14 DNA sequence BAC R-999E24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 211723 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctctccgcctcc 41 ||||||||||| |||||||||| ||||| Sbjct: 29836 cttctcccctcccctcctctcctcctcc 29809
>gb|AC161591.2| Mus musculus BAC clone RP24-270I4 from chromosome 12, complete sequence Length = 188001 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 140920 tctcccctctcctcctctcc 140901
>dbj|AK122443.1| Mus musculus mRNA for mKIAA1102 protein Length = 4184 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 1024 catcgagatcaacatcaaga 1043
>gb|L13687.1|HUMARL2X Homo sapiens ADP-ribosylation factor-like protein 2 (ARL2) mRNA, complete cds Length = 902 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 160 tcaacatcaagaccctggag 179
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 11 cttcttctcccctctcctcctctccgcctccg 42 ||||||||||| ||| ||||||||||||||| Sbjct: 18673034 cttcttctccctcctcatcctctccgcctccg 18673065 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcctcc 41 ||||||||||||| |||||||| ||||| Sbjct: 11608974 cttctcccctctcatcctctcctcctcc 11609001
>emb|AL731548.13| Mouse DNA sequence from clone RP23-71M18 on chromosome X, complete sequence Length = 218612 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttctcccctctcctcctc 32 |||||||||||||||||||| Sbjct: 179127 tcttctcccctctcctcctc 179108
>ref|NM_001001980.1| Mus musculus RIKEN cDNA 3732412D22 gene (3732412D22Rik), mRNA Length = 4698 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catcgagatcaacatcaaga 308 |||||||||||||||||||| Sbjct: 1516 catcgagatcaacatcaaga 1535
>gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete sequence Length = 239994 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 158408 tctcccctctcctcctctcc 158389
>gb|AC131683.4| Mus musculus BAC clone RP23-359C21 from 16, complete sequence Length = 200615 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctcccctctcctcctctcc 35 |||||||||||||||||||| Sbjct: 17258 tctcccctctcctcctctcc 17239
>gb|AC123937.3| Mus musculus BAC clone RP23-408M14 from 6, complete sequence Length = 164294 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cttctcccctctcctcctct 33 |||||||||||||||||||| Sbjct: 37784 cttctcccctctcctcctct 37765
>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence Length = 236246 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 16078 tcaacatcaagaccctggag 16097
>emb|AL928719.6| Mouse DNA sequence from clone RP23-419G21 on chromosome 2, complete sequence Length = 197909 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ctcccctctcctcctctccgcctc 40 ||||||||||||||||||| |||| Sbjct: 33178 ctcccctctcctcctctcctcctc 33201
>emb|AL603868.15| Mouse DNA sequence from clone RP23-101J23 on chromosome 11, complete sequence Length = 209068 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 tcccctctcctcctctccgcctcc 41 |||||||||||||||||| ||||| Sbjct: 131317 tcccctctcctcctctccccctcc 131294
>emb|AL355792.8| Human DNA sequence from clone RP5-1123F10 on chromosome 11 Contains STSs and GSSs, complete sequence Length = 130116 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 14 cttctcccctctcctcctctccgcctcc 41 ||||||||||| |||||||||| ||||| Sbjct: 122982 cttctcccctcccctcctctcctcctcc 123009
>emb|X97053.1|HSPLEC H.sapiens mRNA for plectin Length = 1698 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgccgtgccgcctccgcctcgcc 81 |||||| ||||||||||||||||| Sbjct: 996 ccgccgggccgcctccgcctcgcc 973
>dbj|AP000436.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-34H12, complete sequences Length = 117166 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tcaacatcaagaccctggag 316 |||||||||||||||||||| Sbjct: 76254 tcaacatcaagaccctggag 76273 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,569,332 Number of Sequences: 3902068 Number of extensions: 3569332 Number of successful extensions: 107760 Number of sequences better than 10.0: 176 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106052 Number of HSP's gapped (non-prelim): 1708 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
